Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20371
(544 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 155 2e-38
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 155 2e-38
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 155 2e-38
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 152 2e-37
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 95 4e-20
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 95 4e-20
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 95 4e-20
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 93 1e-19
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 93 1e-19
03_01_0034 + 318432-318825,318902-319851 93 1e-19
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 93 1e-19
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 93 1e-19
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 69 2e-12
06_03_0276 + 19087075-19087910,19089117-19089607,19089737-19091124 31 0.59
06_02_0189 - 12816751-12817088,12817272-12817330,12817745-128177... 30 1.0
03_06_0448 - 34005581-34005655,34005735-34005830,34006669-340076... 29 3.2
07_03_1027 - 23371826-23372006,23372110-23372171,23372595-233743... 28 5.5
06_03_0735 - 23987349-23989196 27 7.3
01_05_0230 + 19543410-19543722,19544165-19544238 27 7.3
03_01_0182 - 1466097-1466147,1466197-1466331,1466659-1466777,146... 27 9.7
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 155 bits (377), Expect = 2e-38
Identities = 69/85 (81%), Positives = 80/85 (94%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRLI QI+SS+T
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
SLRFDGA+NVD+TEFQTNLVPYPRI
Sbjct: 241 SLRFDGAINVDVTEFQTNLVPYPRI 265
Score = 123 bits (296), Expect = 1e-28
Identities = 56/82 (68%), Positives = 65/82 (79%)
Frame = +1
Query: 1 RHEAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 180
+ +AANN+ARGHYT+GKEIVDL LDR+RKLAD CTGLQGFL+F+ LL+E
Sbjct: 96 KEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLE 155
Query: 181 RLSVDYGKKSKLEFAIYPAPQV 246
RLSVDYGKKSKL F IYP+PQV
Sbjct: 156 RLSVDYGKKSKLGFTIYPSPQV 177
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 155 bits (376), Expect = 2e-38
Identities = 68/85 (80%), Positives = 80/85 (94%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+TA
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 240
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
SLRFDGALNVD+ EFQTNLVPYPRI
Sbjct: 241 SLRFDGALNVDVNEFQTNLVPYPRI 265
Score = 123 bits (297), Expect = 8e-29
Identities = 57/82 (69%), Positives = 65/82 (79%)
Frame = +1
Query: 1 RHEAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 180
+ +AANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F+ LL+E
Sbjct: 96 KEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLE 155
Query: 181 RLSVDYGKKSKLEFAIYPAPQV 246
RLSVDYGKKSKL F +YP+PQV
Sbjct: 156 RLSVDYGKKSKLGFTVYPSPQV 177
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 155 bits (376), Expect = 2e-38
Identities = 68/85 (80%), Positives = 80/85 (94%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+TA
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 240
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
SLRFDGALNVD+ EFQTNLVPYPRI
Sbjct: 241 SLRFDGALNVDVNEFQTNLVPYPRI 265
Score = 123 bits (297), Expect = 8e-29
Identities = 57/82 (69%), Positives = 65/82 (79%)
Frame = +1
Query: 1 RHEAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 180
+ +AANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F+ LL+E
Sbjct: 96 KEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLE 155
Query: 181 RLSVDYGKKSKLEFAIYPAPQV 246
RLSVDYGKKSKL F +YP+PQV
Sbjct: 156 RLSVDYGKKSKLGFTVYPSPQV 177
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 152 bits (368), Expect = 2e-37
Identities = 65/85 (76%), Positives = 79/85 (92%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYNS+L+TH+ +EH+D ++DNEAIYDIC+R+LDIERPTYTNLNRLI Q++SS+T
Sbjct: 262 VVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTT 321
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
SLRFDGA+NVD+TEFQTNLVPYPRI
Sbjct: 322 SLRFDGAINVDITEFQTNLVPYPRI 346
Score = 118 bits (284), Expect = 3e-27
Identities = 52/81 (64%), Positives = 64/81 (79%)
Frame = +1
Query: 1 RHEAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 180
+ +AANN+ARGHYT+G+E+VDL LDR+RKLAD CTGLQGFL+F+ LL+E
Sbjct: 156 KEDAANNFARGHYTVGREVVDLCLDRLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLE 215
Query: 181 RLSVDYGKKSKLEFAIYPAPQ 243
RLSVDYG+KSKL F IYP+PQ
Sbjct: 216 RLSVDYGRKSKLGFTIYPSPQ 236
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 94.7 bits (225), Expect = 4e-20
Identities = 41/85 (48%), Positives = 58/85 (68%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + PT+ +LN LI +S +T
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTC 238
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
LRF G LN DL + NL+P+PR+
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRL 263
Score = 70.9 bits (166), Expect = 6e-13
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = +1
Query: 10 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 189
A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++
Sbjct: 97 AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIR 156
Query: 190 VDYGKKSKLEFAIYPAPQV 246
+Y + L F+++P+P+V
Sbjct: 157 EEYPDRMMLTFSVFPSPKV 175
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 94.7 bits (225), Expect = 4e-20
Identities = 41/85 (48%), Positives = 58/85 (68%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + PT+ +LN LI +S +T
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTC 238
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
LRF G LN DL + NL+P+PR+
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRL 263
Score = 70.9 bits (166), Expect = 6e-13
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = +1
Query: 10 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 189
A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++
Sbjct: 97 AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIR 156
Query: 190 VDYGKKSKLEFAIYPAPQV 246
+Y + L F+++P+P+V
Sbjct: 157 EEYPDRMMLTFSVFPSPKV 175
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 94.7 bits (225), Expect = 4e-20
Identities = 41/85 (48%), Positives = 58/85 (68%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + PT+ +LN LI +S +T
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTC 238
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
LRF G LN DL + NL+P+PR+
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRL 263
Score = 70.9 bits (166), Expect = 6e-13
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = +1
Query: 10 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 189
A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++
Sbjct: 97 AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIR 156
Query: 190 VDYGKKSKLEFAIYPAPQV 246
+Y + L F+++P+P+V
Sbjct: 157 EEYPDRMMLTFSVFPSPKV 175
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 93.5 bits (222), Expect = 1e-19
Identities = 40/85 (47%), Positives = 58/85 (68%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T
Sbjct: 195 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISATMSGVTC 254
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
LRF G LN DL + NL+P+PR+
Sbjct: 255 CLRFPGQLNSDLRKLAVNLIPFPRL 279
Score = 54.4 bits (125), Expect = 6e-08
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 16/95 (16%)
Frame = +1
Query: 10 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQ----------------GFLIFHXXX 141
A NN+A+GHYT G E++D VLD +RK A+ C LQ GF + H
Sbjct: 97 AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQDNRVIRQLGSIDNEQSGFQVCHSLG 156
Query: 142 XXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQV 246
LL+ ++ +Y + L F+++P+P+V
Sbjct: 157 GGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKV 191
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 93.1 bits (221), Expect = 1e-19
Identities = 40/85 (47%), Positives = 58/85 (68%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T
Sbjct: 359 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 418
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
LRF G LN DL + NL+P+PR+
Sbjct: 419 CLRFPGQLNSDLRKLAVNLIPFPRL 443
Score = 70.9 bits (166), Expect = 6e-13
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = +1
Query: 10 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 189
A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++
Sbjct: 277 AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIR 336
Query: 190 VDYGKKSKLEFAIYPAPQV 246
+Y + L F+++P+P+V
Sbjct: 337 EEYPDRMMLTFSVFPSPKV 355
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 93.1 bits (221), Expect = 1e-19
Identities = 40/85 (47%), Positives = 58/85 (68%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 238
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
LRF G LN DL + NL+P+PR+
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRL 263
Score = 71.3 bits (167), Expect = 5e-13
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = +1
Query: 10 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 189
A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++
Sbjct: 97 AGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIR 156
Query: 190 VDYGKKSKLEFAIYPAPQV 246
+Y + L F+++P+P+V
Sbjct: 157 EEYPDRMMLTFSVFPSPKV 175
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 93.1 bits (221), Expect = 1e-19
Identities = 40/85 (47%), Positives = 58/85 (68%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T
Sbjct: 200 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 259
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
LRF G LN DL + NL+P+PR+
Sbjct: 260 CLRFPGQLNSDLRKLAVNLIPFPRL 284
Score = 50.4 bits (115), Expect = 9e-07
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 21/100 (21%)
Frame = +1
Query: 10 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQ---------------------GFLI 126
A NN+A+GHYT G E++D VLD +RK A+ C LQ GF +
Sbjct: 97 AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGCRRLLEVHPLTCCESRNMMHGFQV 156
Query: 127 FHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQV 246
H LL+ ++ +Y + L F+++P+P+V
Sbjct: 157 CHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKV 196
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 93.1 bits (221), Expect = 1e-19
Identities = 40/85 (47%), Positives = 58/85 (68%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 238
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
LRF G LN DL + NL+P+PR+
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRL 263
Score = 70.9 bits (166), Expect = 6e-13
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = +1
Query: 10 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 189
A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++
Sbjct: 97 AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIR 156
Query: 190 VDYGKKSKLEFAIYPAPQV 246
+Y + L F+++P+P+V
Sbjct: 157 EEYPDRMMLTFSVFPSPKV 175
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 69.3 bits (162), Expect = 2e-12
Identities = 31/84 (36%), Positives = 49/84 (58%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VV+PYNS+LT ++DC ++DN A+ I L + PT+ N L+ ++S+ T
Sbjct: 182 VVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSASTT 241
Query: 435 SLRFDGALNVDLTEFQTNLVPYPR 506
+LR+ G +N DL +L+P PR
Sbjct: 242 TLRYPGYMNNDLVGLLASLIPTPR 265
Score = 46.4 bits (105), Expect = 1e-05
Identities = 23/75 (30%), Positives = 41/75 (54%)
Frame = +1
Query: 10 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 189
A NN+A G++ G+++VD ++D I + AD L+GF++ H L+E L+
Sbjct: 100 AGNNWASGYHQ-GEQVVDDIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLN 158
Query: 190 VDYGKKSKLEFAIYP 234
Y KK ++++P
Sbjct: 159 DRYSKKLVQTYSVFP 173
>06_03_0276 + 19087075-19087910,19089117-19089607,19089737-19091124
Length = 904
Score = 31.1 bits (67), Expect = 0.59
Identities = 20/73 (27%), Positives = 33/73 (45%)
Frame = -3
Query: 506 TGVRHQVSLELGEVHIQSAVESQRSSDRGDNLSDETIQVGVGWALNVEITAADVIDGFIV 327
TGVR +++ E+ A + S D L DE +++ + DVID F+V
Sbjct: 27 TGVREKINFLKSELEDMHAALRKVGSMHPD-LLDEQVRIWASKVRELSYDMEDVIDAFLV 85
Query: 326 DHESTVRVLKGCV 288
+ +V GC+
Sbjct: 86 RVDGSVPANPGCL 98
>06_02_0189 -
12816751-12817088,12817272-12817330,12817745-12817773,
12817808-12818013,12818245-12818329
Length = 238
Score = 30.3 bits (65), Expect = 1.0
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 318 FMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 440
F+ DN I D +R +E P + +L L QI+SS + L
Sbjct: 130 FLTDNSTIADTAKRRNFLEEPGHWSLRPLWTQIISSTSIDL 170
>03_06_0448 - 34005581-34005655,34005735-34005830,34006669-34007616,
34007684-34007851,34007908-34008099,34008164-34008346,
34008414-34008590,34008667-34012074
Length = 1748
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 222 RHLPRASGFHCVVEPYNSILTTHTTL 299
++L F C VEP+ ++ TTH TL
Sbjct: 1395 QNLVNTDSFECGVEPHGTLKTTHETL 1420
>07_03_1027 -
23371826-23372006,23372110-23372171,23372595-23374335,
23374609-23374704,23374967-23375043,23376807-23377307
Length = 885
Score = 27.9 bits (59), Expect = 5.5
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -1
Query: 160 TQSRYLHRRSGRSGILADRYTGQRACGFCPK-PNLRFPF 47
T + LH + RSG ADR+T C K P PF
Sbjct: 301 TLAASLHALAIRSGSFADRFTANALLNLCIKLPGFHHPF 339
>06_03_0735 - 23987349-23989196
Length = 615
Score = 27.5 bits (58), Expect = 7.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 145 LHRRSGRSGILADRYTGQRACGF 77
LH R+ R+G+LADRY F
Sbjct: 60 LHGRAARAGLLADRYLANALLAF 82
>01_05_0230 + 19543410-19543722,19544165-19544238
Length = 128
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 446 RRRSECGPHRVPD*LGALPPYHF 514
RRR GPH+VP LPP+ F
Sbjct: 100 RRRVRGGPHKVPPAKIILPPFKF 122
>03_01_0182 -
1466097-1466147,1466197-1466331,1466659-1466777,
1467005-1467064,1467206-1467296,1467767-1467955,
1469310-1469393,1469540-1469701,1469790-1469933,
1470053-1470247
Length = 409
Score = 27.1 bits (57), Expect = 9.7
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Frame = -3
Query: 422 GDNLSDETIQVGVGWALNVEITAADVIDGFIV-------DHESTVRVLKGCVGGEDRVVG 264
GD+ S+E + + L E A I F+V +E V + K +G RV G
Sbjct: 73 GDHFSEEEAEATLRLLLEEENEAR--IAAFLVLLRAKGETYEEIVGLAKAMIGCCVRVDG 130
Query: 263 LDDAVET*GAG 231
LDDAV+ G G
Sbjct: 131 LDDAVDIVGTG 141
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,824,806
Number of Sequences: 37544
Number of extensions: 296439
Number of successful extensions: 833
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 833
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1210221432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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