Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20371
(544 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 178 2e-45
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 178 2e-45
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 178 2e-45
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 178 2e-45
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 173 5e-44
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 173 5e-44
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 172 2e-43
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 171 3e-43
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 171 3e-43
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 170 6e-43
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 170 6e-43
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 168 3e-42
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 168 3e-42
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 167 6e-42
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 159 9e-40
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 152 2e-37
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 99 1e-21
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 99 1e-21
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 99 2e-21
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 99 2e-21
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 98 4e-21
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 98 4e-21
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 73 2e-13
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 73 2e-13
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 53 1e-07
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 53 1e-07
U39653-3|AAL56623.1| 1702|Caenorhabditis elegans Prion-like-(q/n... 28 5.0
Z77661-5|CAB01182.1| 343|Caenorhabditis elegans Hypothetical pr... 27 8.7
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 178 bits (434), Expect = 2e-45
Identities = 83/85 (97%), Positives = 85/85 (100%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNLDIERP+YTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA 240
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
SLRFDGALNVDLTEFQTNLVPYPRI
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRI 265
Score = 131 bits (317), Expect = 3e-31
Identities = 60/82 (73%), Positives = 67/82 (81%)
Frame = +1
Query: 1 RHEAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 180
+ +AANNYARGHYTIGKEI+DL LDRIR+LAD CTGLQGFL+FH LLME
Sbjct: 96 KEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLME 155
Query: 181 RLSVDYGKKSKLEFAIYPAPQV 246
RLSVDYGKK+KLEF+IYPAPQV
Sbjct: 156 RLSVDYGKKAKLEFSIYPAPQV 177
Score = 27.1 bits (57), Expect = 8.7
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 500 PPYHFPLVTYAPVIS 544
P HFPL T++PVIS
Sbjct: 263 PRIHFPLATFSPVIS 277
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 178 bits (434), Expect = 2e-45
Identities = 83/85 (97%), Positives = 85/85 (100%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNLDIERP+YTNLNRLIGQIVSSITA
Sbjct: 180 VVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA 239
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
SLRFDGALNVDLTEFQTNLVPYPRI
Sbjct: 240 SLRFDGALNVDLTEFQTNLVPYPRI 264
Score = 131 bits (317), Expect = 3e-31
Identities = 60/82 (73%), Positives = 67/82 (81%)
Frame = +1
Query: 1 RHEAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 180
+ +AANNYARGHYTIGKEI+DL LDRIR+LAD CTGLQGFL+FH LLME
Sbjct: 95 KEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLME 154
Query: 181 RLSVDYGKKSKLEFAIYPAPQV 246
RLSVDYGKK+KLEF+IYPAPQV
Sbjct: 155 RLSVDYGKKAKLEFSIYPAPQV 176
Score = 27.1 bits (57), Expect = 8.7
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 500 PPYHFPLVTYAPVIS 544
P HFPL T++PVIS
Sbjct: 262 PRIHFPLATFSPVIS 276
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 178 bits (434), Expect = 2e-45
Identities = 83/85 (97%), Positives = 85/85 (100%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNLDIERP+YTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA 240
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
SLRFDGALNVDLTEFQTNLVPYPRI
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRI 265
Score = 131 bits (317), Expect = 3e-31
Identities = 60/82 (73%), Positives = 67/82 (81%)
Frame = +1
Query: 1 RHEAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 180
+ +AANNYARGHYTIGKEI+DL LDRIR+LAD CTGLQGFL+FH LLME
Sbjct: 96 KEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLME 155
Query: 181 RLSVDYGKKSKLEFAIYPAPQV 246
RLSVDYGKK+KLEF+IYPAPQV
Sbjct: 156 RLSVDYGKKAKLEFSIYPAPQV 177
Score = 27.1 bits (57), Expect = 8.7
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 500 PPYHFPLVTYAPVIS 544
P HFPL T++PVIS
Sbjct: 263 PRIHFPLATFSPVIS 277
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 178 bits (434), Expect = 2e-45
Identities = 83/85 (97%), Positives = 85/85 (100%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNLDIERP+YTNLNRLIGQIVSSITA
Sbjct: 181 VVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA 240
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
SLRFDGALNVDLTEFQTNLVPYPRI
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRI 265
Score = 131 bits (317), Expect = 3e-31
Identities = 60/82 (73%), Positives = 67/82 (81%)
Frame = +1
Query: 1 RHEAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 180
+ +AANNYARGHYTIGKEI+DL LDRIR+LAD CTGLQGFL+FH LLME
Sbjct: 96 KEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLME 155
Query: 181 RLSVDYGKKSKLEFAIYPAPQV 246
RLSVDYGKK+KLEF+IYPAPQV
Sbjct: 156 RLSVDYGKKAKLEFSIYPAPQV 177
Score = 27.1 bits (57), Expect = 8.7
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 500 PPYHFPLVTYAPVIS 544
P HFPL T++PVIS
Sbjct: 263 PRIHFPLATFSPVIS 277
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 173 bits (422), Expect = 5e-44
Identities = 79/85 (92%), Positives = 83/85 (97%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD+ERP+YTNLNR+I Q+VSSITA
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVERPSYTNLNRIISQVVSSITA 238
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
SLRFDGALNVDL EFQTNLVPYPRI
Sbjct: 239 SLRFDGALNVDLNEFQTNLVPYPRI 263
Score = 128 bits (308), Expect = 3e-30
Identities = 57/82 (69%), Positives = 66/82 (80%)
Frame = +1
Query: 1 RHEAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 180
+ +AANNYARGHYT+GKE++D VLDRIR+LAD C+GLQGF +FH LLME
Sbjct: 94 KEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLME 153
Query: 181 RLSVDYGKKSKLEFAIYPAPQV 246
RLSVDYGKKSKLEF+IYPAPQV
Sbjct: 154 RLSVDYGKKSKLEFSIYPAPQV 175
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 173 bits (422), Expect = 5e-44
Identities = 79/85 (92%), Positives = 83/85 (97%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD+ERP+YTNLNR+I Q+VSSITA
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVERPSYTNLNRIISQVVSSITA 238
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
SLRFDGALNVDL EFQTNLVPYPRI
Sbjct: 239 SLRFDGALNVDLNEFQTNLVPYPRI 263
Score = 128 bits (308), Expect = 3e-30
Identities = 57/82 (69%), Positives = 66/82 (80%)
Frame = +1
Query: 1 RHEAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 180
+ +AANNYARGHYT+GKE++D VLDRIR+LAD C+GLQGF +FH LLME
Sbjct: 94 KEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLME 153
Query: 181 RLSVDYGKKSKLEFAIYPAPQV 246
RLSVDYGKKSKLEF+IYPAPQV
Sbjct: 154 RLSVDYGKKSKLEFSIYPAPQV 175
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 172 bits (418), Expect = 2e-43
Identities = 77/85 (90%), Positives = 83/85 (97%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
+VEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNLD+ RPTYTNLNRLI Q++SS+TA
Sbjct: 186 MVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDLARPTYTNLNRLIAQVISSVTA 245
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
SLRFDGALNVDLTEFQTNLVPYPRI
Sbjct: 246 SLRFDGALNVDLTEFQTNLVPYPRI 270
Score = 126 bits (303), Expect = 1e-29
Identities = 56/82 (68%), Positives = 65/82 (79%)
Frame = +1
Query: 1 RHEAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 180
+ +AANNYARGHYTIGKEI+D+V+DR+R+L + C GLQGFL+FH LLME
Sbjct: 101 KEDAANNYARGHYTIGKEIIDVVMDRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLME 160
Query: 181 RLSVDYGKKSKLEFAIYPAPQV 246
RLSVDYGKKSKLEF IYPAPQV
Sbjct: 161 RLSVDYGKKSKLEFCIYPAPQV 182
Score = 29.5 bits (63), Expect = 1.6
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2
Query: 500 PPYHFPLVTYAPVIS 544
P HFPL TYAP+IS
Sbjct: 268 PRIHFPLTTYAPIIS 282
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 171 bits (416), Expect = 3e-43
Identities = 77/85 (90%), Positives = 83/85 (97%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC+RNLD++RP+YTNLNR+I Q+VSSITA
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDVDRPSYTNLNRIISQVVSSITA 238
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
SLRFDGALNVDL EFQTNLVPYPRI
Sbjct: 239 SLRFDGALNVDLNEFQTNLVPYPRI 263
Score = 126 bits (304), Expect = 1e-29
Identities = 56/82 (68%), Positives = 65/82 (79%)
Frame = +1
Query: 1 RHEAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 180
+ +AANNYARGHYT+GKE++D LDRIR+LAD C+GLQGF +FH LLME
Sbjct: 94 KEDAANNYARGHYTVGKELIDTTLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLME 153
Query: 181 RLSVDYGKKSKLEFAIYPAPQV 246
RLSVDYGKKSKLEF+IYPAPQV
Sbjct: 154 RLSVDYGKKSKLEFSIYPAPQV 175
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 171 bits (416), Expect = 3e-43
Identities = 77/85 (90%), Positives = 83/85 (97%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC+RNLD++RP+YTNLNR+I Q+VSSITA
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDVDRPSYTNLNRIISQVVSSITA 238
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
SLRFDGALNVDL EFQTNLVPYPRI
Sbjct: 239 SLRFDGALNVDLNEFQTNLVPYPRI 263
Score = 126 bits (304), Expect = 1e-29
Identities = 56/82 (68%), Positives = 65/82 (79%)
Frame = +1
Query: 1 RHEAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 180
+ +AANNYARGHYT+GKE++D LDRIR+LAD C+GLQGF +FH LLME
Sbjct: 94 KEDAANNYARGHYTVGKELIDTTLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLME 153
Query: 181 RLSVDYGKKSKLEFAIYPAPQV 246
RLSVDYGKKSKLEF+IYPAPQV
Sbjct: 154 RLSVDYGKKSKLEFSIYPAPQV 175
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 170 bits (413), Expect = 6e-43
Identities = 77/85 (90%), Positives = 82/85 (96%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL ++RP+YTNLNR+I Q+VSSITA
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSVDRPSYTNLNRIISQVVSSITA 238
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
SLRFDGALNVDL EFQTNLVPYPRI
Sbjct: 239 SLRFDGALNVDLNEFQTNLVPYPRI 263
Score = 128 bits (308), Expect = 3e-30
Identities = 57/82 (69%), Positives = 66/82 (80%)
Frame = +1
Query: 1 RHEAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 180
+ +AANNYARGHYT+GKE++D VLDRIR+LAD C+GLQGF +FH LLME
Sbjct: 94 KEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLME 153
Query: 181 RLSVDYGKKSKLEFAIYPAPQV 246
RLSVDYGKKSKLEF+IYPAPQV
Sbjct: 154 RLSVDYGKKSKLEFSIYPAPQV 175
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 170 bits (413), Expect = 6e-43
Identities = 77/85 (90%), Positives = 82/85 (96%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL ++RP+YTNLNR+I Q+VSSITA
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSVDRPSYTNLNRIISQVVSSITA 238
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
SLRFDGALNVDL EFQTNLVPYPRI
Sbjct: 239 SLRFDGALNVDLNEFQTNLVPYPRI 263
Score = 128 bits (308), Expect = 3e-30
Identities = 57/82 (69%), Positives = 66/82 (80%)
Frame = +1
Query: 1 RHEAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 180
+ +AANNYARGHYT+GKE++D VLDRIR+LAD C+GLQGF +FH LLME
Sbjct: 94 KEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLME 153
Query: 181 RLSVDYGKKSKLEFAIYPAPQV 246
RLSVDYGKKSKLEF+IYPAPQV
Sbjct: 154 RLSVDYGKKSKLEFSIYPAPQV 175
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 168 bits (408), Expect = 3e-42
Identities = 76/85 (89%), Positives = 81/85 (95%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
+VEPYNSIL THTTLEHSDC FMVDNEAIYDICRRNLD+ RPTYTNLNRL+ QI+SSITA
Sbjct: 187 MVEPYNSILMTHTTLEHSDCTFMVDNEAIYDICRRNLDLARPTYTNLNRLVAQIISSITA 246
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
SLRF+GALNVDLTEFQTNLVPYPRI
Sbjct: 247 SLRFEGALNVDLTEFQTNLVPYPRI 271
Score = 113 bits (271), Expect = 1e-25
Identities = 50/82 (60%), Positives = 63/82 (76%)
Frame = +1
Query: 1 RHEAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 180
+ +AAN YARG YTIG+E++D+V+DR+++LA+ C GLQGF+IFH LLME
Sbjct: 102 KEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLME 161
Query: 181 RLSVDYGKKSKLEFAIYPAPQV 246
RLS +YGKK KLEFAIYPAPQV
Sbjct: 162 RLSTEYGKKPKLEFAIYPAPQV 183
Score = 29.9 bits (64), Expect = 1.2
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2
Query: 500 PPYHFPLVTYAPVIS 544
P HFPLVTYAP++S
Sbjct: 269 PRIHFPLVTYAPLVS 283
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 168 bits (408), Expect = 3e-42
Identities = 76/85 (89%), Positives = 81/85 (95%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
+VEPYNSIL THTTLEHSDC FMVDNEAIYDICRRNLD+ RPTYTNLNRL+ QI+SSITA
Sbjct: 159 MVEPYNSILMTHTTLEHSDCTFMVDNEAIYDICRRNLDLARPTYTNLNRLVAQIISSITA 218
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
SLRF+GALNVDLTEFQTNLVPYPRI
Sbjct: 219 SLRFEGALNVDLTEFQTNLVPYPRI 243
Score = 113 bits (271), Expect = 1e-25
Identities = 50/82 (60%), Positives = 63/82 (76%)
Frame = +1
Query: 1 RHEAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 180
+ +AAN YARG YTIG+E++D+V+DR+++LA+ C GLQGF+IFH LLME
Sbjct: 74 KEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLME 133
Query: 181 RLSVDYGKKSKLEFAIYPAPQV 246
RLS +YGKK KLEFAIYPAPQV
Sbjct: 134 RLSTEYGKKPKLEFAIYPAPQV 155
Score = 29.9 bits (64), Expect = 1.2
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2
Query: 500 PPYHFPLVTYAPVIS 544
P HFPLVTYAP++S
Sbjct: 241 PRIHFPLVTYAPLVS 255
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 167 bits (405), Expect = 6e-42
Identities = 76/85 (89%), Positives = 80/85 (94%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNL + RPTY NLNR+I Q+VSSITA
Sbjct: 178 VVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLRVSRPTYNNLNRIISQVVSSITA 237
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
SLRFDGALNVDL EFQTNLVPYPRI
Sbjct: 238 SLRFDGALNVDLNEFQTNLVPYPRI 262
Score = 120 bits (288), Expect = 9e-28
Identities = 52/82 (63%), Positives = 63/82 (76%)
Frame = +1
Query: 1 RHEAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 180
+ +AANNYARGHYT+GKEI+D LDRIR+LA+ C GLQGF +FH +LME
Sbjct: 93 KEDAANNYARGHYTVGKEIIDTTLDRIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLME 152
Query: 181 RLSVDYGKKSKLEFAIYPAPQV 246
RLS +YGKKSKLEF+IYPAPQ+
Sbjct: 153 RLSAEYGKKSKLEFSIYPAPQI 174
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 159 bits (387), Expect = 9e-40
Identities = 73/85 (85%), Positives = 80/85 (94%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYNSILTTHTTLE SDC+FMVDNEAIYD+CR+ L +ERP+Y+NLNRLI Q+VSSITA
Sbjct: 184 VVEPYNSILTTHTTLELSDCSFMVDNEAIYDLCRQKLHVERPSYSNLNRLIAQVVSSITA 243
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
SLRFDGALNVDL EFQTNLVPYPRI
Sbjct: 244 SLRFDGALNVDLNEFQTNLVPYPRI 268
Score = 122 bits (293), Expect = 2e-28
Identities = 54/82 (65%), Positives = 65/82 (79%)
Frame = +1
Query: 1 RHEAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 180
+ +AANNYARGHYTIGKE++D+VLDRIRK + C GLQGFL+FH LLME
Sbjct: 99 KEDAANNYARGHYTIGKELIDVVLDRIRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLME 158
Query: 181 RLSVDYGKKSKLEFAIYPAPQV 246
RLSV++GKKSKLEF++YPAPQV
Sbjct: 159 RLSVEFGKKSKLEFSVYPAPQV 180
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +2
Query: 500 PPYHFPLVTYAPVIS 544
P HFPL TYAPVIS
Sbjct: 266 PRIHFPLATYAPVIS 280
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 152 bits (368), Expect = 2e-37
Identities = 68/85 (80%), Positives = 79/85 (92%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
+VEPYNS+LTTHTTLEHSDC+F++DNEAIY+I + NL + PTYT+LNRL+ Q+VSSITA
Sbjct: 181 MVEPYNSLLTTHTTLEHSDCSFIMDNEAIYEITKVNLGVRSPTYTHLNRLLAQVVSSITA 240
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
SLRFDGALNVDLTEFQTNLVPYPRI
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRI 265
Score = 120 bits (290), Expect = 5e-28
Identities = 51/82 (62%), Positives = 66/82 (80%)
Frame = +1
Query: 1 RHEAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 180
+ +AANNYARGHYTIGKE++D+V+DR+R+L ++C LQGFLIFH L+ME
Sbjct: 96 KEDAANNYARGHYTIGKELIDVVMDRVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVME 155
Query: 181 RLSVDYGKKSKLEFAIYPAPQV 246
RLS+DYGKK+KLEF+IYPAPQ+
Sbjct: 156 RLSIDYGKKAKLEFSIYPAPQI 177
Score = 31.1 bits (67), Expect = 0.54
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +2
Query: 500 PPYHFPLVTYAPVIS 544
P HFPLVTYAP+IS
Sbjct: 263 PRIHFPLVTYAPIIS 277
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 99 bits (238), Expect = 1e-21
Identities = 42/85 (49%), Positives = 58/85 (68%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYN+ L+ H +E++D F +DNEA+YDIC R L + PTY +LN L+ +S +T
Sbjct: 179 VVEPYNATLSVHQLVENTDSTFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
LRF G LN DL + N+VP+PR+
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFPRL 263
Score = 61.7 bits (143), Expect = 3e-10
Identities = 30/79 (37%), Positives = 45/79 (56%)
Frame = +1
Query: 10 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 189
A NN+A+GHYT G E+VD VLD +RK A+ LQGF + H LL+ ++
Sbjct: 97 AGNNWAKGHYTEGAELVDNVLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIR 156
Query: 190 VDYGKKSKLEFAIYPAPQV 246
+Y + F++ P+P+V
Sbjct: 157 EEYPDRIMNTFSVVPSPKV 175
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 99 bits (238), Expect = 1e-21
Identities = 42/85 (49%), Positives = 58/85 (68%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYN+ L+ H +E++D F +DNEA+YDIC R L + PTY +LN L+ +S +T
Sbjct: 179 VVEPYNATLSVHQLVENTDSTFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
LRF G LN DL + N+VP+PR+
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFPRL 263
Score = 61.7 bits (143), Expect = 3e-10
Identities = 30/79 (37%), Positives = 45/79 (56%)
Frame = +1
Query: 10 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 189
A NN+A+GHYT G E+VD VLD +RK A+ LQGF + H LL+ ++
Sbjct: 97 AGNNWAKGHYTEGAELVDNVLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIR 156
Query: 190 VDYGKKSKLEFAIYPAPQV 246
+Y + F++ P+P+V
Sbjct: 157 EEYPDRIMNTFSVVPSPKV 175
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 99.1 bits (236), Expect = 2e-21
Identities = 42/85 (49%), Positives = 58/85 (68%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYN+ L+ H +E++D F +DNEA+YDIC R L + PTY +LN L+ +S +T
Sbjct: 179 VVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLSNPTYGDLNHLVSVTMSGVTT 238
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
LRF G LN DL + N+VP+PR+
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFPRL 263
Score = 65.7 bits (153), Expect = 2e-11
Identities = 31/79 (39%), Positives = 46/79 (58%)
Frame = +1
Query: 10 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 189
A NN+A+GHYT G E+VD VLD +RK A+ C LQGF + H LL+ ++
Sbjct: 97 AGNNWAKGHYTEGAELVDNVLDVVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIR 156
Query: 190 VDYGKKSKLEFAIYPAPQV 246
+Y + F++ P+P+V
Sbjct: 157 EEYPDRIMSSFSVVPSPKV 175
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 99.1 bits (236), Expect = 2e-21
Identities = 42/85 (49%), Positives = 58/85 (68%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYN+ L+ H +E++D F +DNEA+YDIC R L + PTY +LN L+ +S +T
Sbjct: 179 VVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSMTMSGVTT 238
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
LRF G LN DL + N+VP+PR+
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFPRL 263
Score = 67.3 bits (157), Expect = 7e-12
Identities = 31/79 (39%), Positives = 47/79 (59%)
Frame = +1
Query: 10 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 189
A NN+A+GHYT G E+VD VLD +RK A+ C LQGF + H LL+ ++
Sbjct: 97 AGNNWAKGHYTEGAELVDNVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIR 156
Query: 190 VDYGKKSKLEFAIYPAPQV 246
+Y + + F++ P+P+V
Sbjct: 157 EEYPDRIMMTFSVVPSPKV 175
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 97.9 bits (233), Expect = 4e-21
Identities = 41/85 (48%), Positives = 58/85 (68%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S +T
Sbjct: 179 VVEPYNATLSVHQLVENTDETYCIDNEALYDICYRTLKLTNPTYGDLNHLVSLTMSGVTT 238
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
LRF G LN DL + N+VP+PR+
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFPRL 263
Score = 64.5 bits (150), Expect = 5e-11
Identities = 31/79 (39%), Positives = 46/79 (58%)
Frame = +1
Query: 10 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 189
A NN+A+GHYT G E+VD VLD IRK A+ C LQGF + H LL+ ++
Sbjct: 97 AGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIR 156
Query: 190 VDYGKKSKLEFAIYPAPQV 246
++ + F++ P+P+V
Sbjct: 157 EEFPDRIMSSFSVVPSPKV 175
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 97.9 bits (233), Expect = 4e-21
Identities = 41/85 (48%), Positives = 58/85 (68%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S +T
Sbjct: 179 VVEPYNATLSVHQLVENTDETYCIDNEALYDICYRTLKLTNPTYGDLNHLVSLTMSGVTT 238
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
LRF G LN DL + N+VP+PR+
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFPRL 263
Score = 66.1 bits (154), Expect = 2e-11
Identities = 32/79 (40%), Positives = 46/79 (58%)
Frame = +1
Query: 10 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 189
A NN+A+GHYT G E+VD VLD IRK A+ C LQGF + H LL+ ++
Sbjct: 97 AGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIR 156
Query: 190 VDYGKKSKLEFAIYPAPQV 246
+Y + F++ P+P+V
Sbjct: 157 EEYPDRIMSSFSVVPSPKV 175
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 72.5 bits (170), Expect = 2e-13
Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = +3
Query: 228 LPRASGFHCVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE-RPTYTNLNRL 404
+P A VVEPYN+IL+ +++ D F +DNEAI+DIC+ NL +E R TY +LN L
Sbjct: 170 IPSAKVSDTVVEPYNAILSMPHLMDNCDENFCIDNEAIFDICQYNLKLENRVTYGDLNHL 229
Query: 405 IGQIVSSITASLRFDGALNVDLTEFQT 485
+S IT RF G L D+ + T
Sbjct: 230 ASLALSGITTFQRFKGNLKTDIRKLNT 256
Score = 53.6 bits (123), Expect = 9e-08
Identities = 28/79 (35%), Positives = 42/79 (53%)
Frame = +1
Query: 10 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 189
A NN++RG+Y G EIVD VL IR+ A+ L+GF + H LL+ +L
Sbjct: 97 AGNNWSRGYYEQGAEIVDKVLSVIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLR 156
Query: 190 VDYGKKSKLEFAIYPAPQV 246
+Y K+ +I P+ +V
Sbjct: 157 EEYSDKTLSTCSIIPSAKV 175
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 72.5 bits (170), Expect = 2e-13
Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = +3
Query: 228 LPRASGFHCVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE-RPTYTNLNRL 404
+P A VVEPYN+IL+ +++ D F +DNEAI+DIC+ NL +E R TY +LN L
Sbjct: 170 IPSAKVSDTVVEPYNAILSMPHLMDNCDENFCIDNEAIFDICQYNLKLENRVTYGDLNHL 229
Query: 405 IGQIVSSITASLRFDGALNVDLTEFQT 485
+S IT RF G L D+ + T
Sbjct: 230 ASLALSGITTFQRFKGNLKTDIRKLNT 256
Score = 53.6 bits (123), Expect = 9e-08
Identities = 28/79 (35%), Positives = 42/79 (53%)
Frame = +1
Query: 10 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 189
A NN++RG+Y G EIVD VL IR+ A+ L+GF + H LL+ +L
Sbjct: 97 AGNNWSRGYYEQGAEIVDKVLSVIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLR 156
Query: 190 VDYGKKSKLEFAIYPAPQV 246
+Y K+ +I P+ +V
Sbjct: 157 EEYSDKTLSTCSIIPSAKV 175
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/83 (30%), Positives = 47/83 (56%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VV PYN +L+ +E+ D ++DN A++ + + PT+ ++N L+ +I+S+ TA
Sbjct: 184 VVHPYNWVLSMQRLIENPDHVVVLDNAALHRLAAGKFKTDTPTFDHINSLVARIMSTSTA 243
Query: 435 SLRFDGALNVDLTEFQTNLVPYP 503
RF+ A+ + +L P+P
Sbjct: 244 PYRFNSAMCPSIR--YLDLAPFP 264
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/83 (30%), Positives = 47/83 (56%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VV PYN +L+ +E+ D ++DN A++ + + PT+ ++N L+ +I+S+ TA
Sbjct: 184 VVHPYNWVLSMQRLIENPDHVVVLDNAALHRLAAGKFKTDTPTFDHINSLVARIMSTSTA 243
Query: 435 SLRFDGALNVDLTEFQTNLVPYP 503
RF+ A+ + +L P+P
Sbjct: 244 PYRFNSAMCPSIR--YLDLAPFP 264
>U39653-3|AAL56623.1| 1702|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 65,
isoform a protein.
Length = 1702
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 478 NSVRSTFRAPSNLKEAVIEETICP 407
+ VRST + PSN KE I + CP
Sbjct: 634 SQVRSTKKLPSNFKEDDIRHSTCP 657
>Z77661-5|CAB01182.1| 343|Caenorhabditis elegans Hypothetical
protein F40G12.6 protein.
Length = 343
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = +3
Query: 360 NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRITSHWSRTRQS 539
+L E T + L+GQ++S +T++ G +N+D F+ Y +T + + +
Sbjct: 19 SLQNETETIGKCDLLVGQLLSVLTSASDLQGEVNID--SFEKVSSKYTAVTECYGTLKSA 76
Query: 540 S 542
S
Sbjct: 77 S 77
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,852,847
Number of Sequences: 27780
Number of extensions: 229109
Number of successful extensions: 764
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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