Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20371
(544 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 156 1e-38
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 156 1e-38
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 154 3e-38
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 154 3e-38
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 154 4e-38
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 154 4e-38
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 151 4e-37
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 95 2e-20
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 95 2e-20
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 95 3e-20
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 95 3e-20
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 93 8e-20
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 93 1e-19
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 93 1e-19
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 93 1e-19
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 93 1e-19
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 69 2e-12
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 69 2e-12
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 29 1.5
At1g70140.1 68414.m08071 formin homology 2 domain-containing pro... 29 2.7
At4g30150.1 68417.m04287 expressed protein 28 3.5
At5g46650.1 68418.m05748 zinc finger (C3HC4-type RING finger) fa... 27 8.1
At5g36930.1 68418.m04427 disease resistance protein (TIR-NBS-LRR... 27 8.1
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 156 bits (378), Expect = 1e-38
Identities = 69/85 (81%), Positives = 80/85 (94%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRLI QI+SS+T
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
SLRFDGA+NVD+TEFQTNLVPYPRI
Sbjct: 241 SLRFDGAINVDITEFQTNLVPYPRI 265
Score = 123 bits (296), Expect = 9e-29
Identities = 56/82 (68%), Positives = 65/82 (79%)
Frame = +1
Query: 1 RHEAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 180
+ +AANN+ARGHYT+GKEIVDL LDR+RKLAD CTGLQGFL+F+ LL+E
Sbjct: 96 KEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLE 155
Query: 181 RLSVDYGKKSKLEFAIYPAPQV 246
RLSVDYGKKSKL F IYP+PQV
Sbjct: 156 RLSVDYGKKSKLGFTIYPSPQV 177
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 156 bits (378), Expect = 1e-38
Identities = 69/85 (81%), Positives = 80/85 (94%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRLI QI+SS+T
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
SLRFDGA+NVD+TEFQTNLVPYPRI
Sbjct: 241 SLRFDGAINVDITEFQTNLVPYPRI 265
Score = 123 bits (296), Expect = 9e-29
Identities = 56/82 (68%), Positives = 65/82 (79%)
Frame = +1
Query: 1 RHEAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 180
+ +AANN+ARGHYT+GKEIVDL LDR+RKLAD CTGLQGFL+F+ LL+E
Sbjct: 96 KEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLE 155
Query: 181 RLSVDYGKKSKLEFAIYPAPQV 246
RLSVDYGKKSKL F IYP+PQV
Sbjct: 156 RLSVDYGKKSKLGFTIYPSPQV 177
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 154 bits (374), Expect = 3e-38
Identities = 67/85 (78%), Positives = 81/85 (95%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+L+IERPTYTNLNRL+ Q++SS+TA
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTA 240
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
SLRFDGALNVD+TEFQTNLVPYPRI
Sbjct: 241 SLRFDGALNVDVTEFQTNLVPYPRI 265
Score = 123 bits (297), Expect = 7e-29
Identities = 57/82 (69%), Positives = 65/82 (79%)
Frame = +1
Query: 1 RHEAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 180
+ +AANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F+ LL+E
Sbjct: 96 KEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLE 155
Query: 181 RLSVDYGKKSKLEFAIYPAPQV 246
RLSVDYGKKSKL F +YP+PQV
Sbjct: 156 RLSVDYGKKSKLGFTVYPSPQV 177
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 154 bits (374), Expect = 3e-38
Identities = 67/85 (78%), Positives = 81/85 (95%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+L+IERPTYTNLNRL+ Q++SS+TA
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTA 240
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
SLRFDGALNVD+TEFQTNLVPYPRI
Sbjct: 241 SLRFDGALNVDVTEFQTNLVPYPRI 265
Score = 123 bits (297), Expect = 7e-29
Identities = 57/82 (69%), Positives = 65/82 (79%)
Frame = +1
Query: 1 RHEAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 180
+ +AANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F+ LL+E
Sbjct: 96 KEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLE 155
Query: 181 RLSVDYGKKSKLEFAIYPAPQV 246
RLSVDYGKKSKL F +YP+PQV
Sbjct: 156 RLSVDYGKKSKLGFTVYPSPQV 177
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 154 bits (373), Expect = 4e-38
Identities = 67/85 (78%), Positives = 80/85 (94%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+L IERPTYTNLNRL+ Q++SS+TA
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTA 240
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
SLRFDGALNVD+TEFQTNLVPYPRI
Sbjct: 241 SLRFDGALNVDVTEFQTNLVPYPRI 265
Score = 123 bits (297), Expect = 7e-29
Identities = 57/82 (69%), Positives = 65/82 (79%)
Frame = +1
Query: 1 RHEAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 180
+ +AANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F+ LL+E
Sbjct: 96 KEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLE 155
Query: 181 RLSVDYGKKSKLEFAIYPAPQV 246
RLSVDYGKKSKL F +YP+PQV
Sbjct: 156 RLSVDYGKKSKLGFTVYPSPQV 177
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 154 bits (373), Expect = 4e-38
Identities = 67/85 (78%), Positives = 80/85 (94%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+L IERPTYTNLNRL+ Q++SS+TA
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTA 240
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
SLRFDGALNVD+TEFQTNLVPYPRI
Sbjct: 241 SLRFDGALNVDVTEFQTNLVPYPRI 265
Score = 123 bits (297), Expect = 7e-29
Identities = 57/82 (69%), Positives = 65/82 (79%)
Frame = +1
Query: 1 RHEAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 180
+ +AANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F+ LL+E
Sbjct: 96 KEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLE 155
Query: 181 RLSVDYGKKSKLEFAIYPAPQV 246
RLSVDYGKKSKL F +YP+PQV
Sbjct: 156 RLSVDYGKKSKLGFTVYPSPQV 177
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 151 bits (365), Expect = 4e-37
Identities = 66/85 (77%), Positives = 78/85 (91%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYNS+L+TH+ LEH+D ++DNEAIYDICRR+LDIERPTY+NLNRLI Q +SS+T
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYSNLNRLISQTISSLTT 240
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
SLRFDGA+NVD+TEFQTNLVPYPRI
Sbjct: 241 SLRFDGAINVDITEFQTNLVPYPRI 265
Score = 116 bits (279), Expect = 1e-26
Identities = 52/82 (63%), Positives = 64/82 (78%)
Frame = +1
Query: 1 RHEAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 180
+ +AANN+ARGHYT+G+EIVD L+R+RKLAD CTGLQGFL+F+ LL+E
Sbjct: 96 KEDAANNFARGHYTVGREIVDTCLERLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLE 155
Query: 181 RLSVDYGKKSKLEFAIYPAPQV 246
RLSVD+GKKSKL F IYP+PQV
Sbjct: 156 RLSVDFGKKSKLGFTIYPSPQV 177
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 95.5 bits (227), Expect = 2e-20
Identities = 41/85 (48%), Positives = 59/85 (69%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T
Sbjct: 180 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTC 239
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
SLRF G LN DL + NL+P+PR+
Sbjct: 240 SLRFPGQLNSDLRKLAVNLIPFPRL 264
Score = 71.3 bits (167), Expect = 4e-13
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = +1
Query: 10 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 189
A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++
Sbjct: 98 AGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIR 157
Query: 190 VDYGKKSKLEFAIYPAPQV 246
+Y + L F+++P+P+V
Sbjct: 158 EEYPDRMMLTFSVFPSPKV 176
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 95.5 bits (227), Expect = 2e-20
Identities = 41/85 (48%), Positives = 59/85 (69%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T
Sbjct: 180 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTC 239
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
SLRF G LN DL + NL+P+PR+
Sbjct: 240 SLRFPGQLNSDLRKLAVNLIPFPRL 264
Score = 71.3 bits (167), Expect = 4e-13
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = +1
Query: 10 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 189
A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++
Sbjct: 98 AGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIR 157
Query: 190 VDYGKKSKLEFAIYPAPQV 246
+Y + L F+++P+P+V
Sbjct: 158 EEYPDRMMLTFSVFPSPKV 176
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 95.1 bits (226), Expect = 3e-20
Identities = 41/85 (48%), Positives = 58/85 (68%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + PT+ +LN LI +S +T
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTC 238
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
LRF G LN DL + NL+P+PR+
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRL 263
Score = 66.1 bits (154), Expect = 1e-11
Identities = 29/79 (36%), Positives = 47/79 (59%)
Frame = +1
Query: 10 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 189
A NN+A+GHYT G E++D VLD +RK A+ LQGF + H LL+ ++
Sbjct: 97 AGNNWAKGHYTEGAELIDSVLDVVRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIR 156
Query: 190 VDYGKKSKLEFAIYPAPQV 246
+Y + + F+++P+P+V
Sbjct: 157 EEYPDRMMMTFSVFPSPKV 175
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 95.1 bits (226), Expect = 3e-20
Identities = 41/85 (48%), Positives = 58/85 (68%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + PT+ +LN LI +S +T
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTC 238
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
LRF G LN DL + NL+P+PR+
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRL 263
Score = 70.1 bits (164), Expect = 9e-13
Identities = 30/79 (37%), Positives = 48/79 (60%)
Frame = +1
Query: 10 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 189
A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++
Sbjct: 97 AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIR 156
Query: 190 VDYGKKSKLEFAIYPAPQV 246
+Y + + F+++P+P+V
Sbjct: 157 EEYPDRMMMTFSVFPSPKV 175
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 93.5 bits (222), Expect = 8e-20
Identities = 40/85 (47%), Positives = 58/85 (68%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTC 238
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
LRF G LN DL + NL+P+PR+
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRL 263
Score = 70.1 bits (164), Expect = 9e-13
Identities = 30/79 (37%), Positives = 48/79 (60%)
Frame = +1
Query: 10 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 189
A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++
Sbjct: 97 AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIR 156
Query: 190 VDYGKKSKLEFAIYPAPQV 246
+Y + + F+++P+P+V
Sbjct: 157 EEYPDRMMMTFSVFPSPKV 175
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 93.1 bits (221), Expect = 1e-19
Identities = 40/85 (47%), Positives = 58/85 (68%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 238
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
LRF G LN DL + NL+P+PR+
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRL 263
Score = 70.9 bits (166), Expect = 5e-13
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = +1
Query: 10 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 189
A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++
Sbjct: 97 AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIR 156
Query: 190 VDYGKKSKLEFAIYPAPQV 246
+Y + L F+++P+P+V
Sbjct: 157 EEYPDRMMLTFSVFPSPKV 175
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 93.1 bits (221), Expect = 1e-19
Identities = 40/85 (47%), Positives = 58/85 (68%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 238
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
LRF G LN DL + NL+P+PR+
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRL 263
Score = 70.9 bits (166), Expect = 5e-13
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = +1
Query: 10 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 189
A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++
Sbjct: 97 AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIR 156
Query: 190 VDYGKKSKLEFAIYPAPQV 246
+Y + L F+++P+P+V
Sbjct: 157 EEYPDRMMLTFSVFPSPKV 175
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 93.1 bits (221), Expect = 1e-19
Identities = 40/85 (47%), Positives = 58/85 (68%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 238
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
LRF G LN DL + NL+P+PR+
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRL 263
Score = 70.9 bits (166), Expect = 5e-13
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = +1
Query: 10 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 189
A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++
Sbjct: 97 AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIR 156
Query: 190 VDYGKKSKLEFAIYPAPQV 246
+Y + L F+++P+P+V
Sbjct: 157 EEYPDRMMLTFSVFPSPKV 175
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 93.1 bits (221), Expect = 1e-19
Identities = 40/85 (47%), Positives = 58/85 (68%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 238
Query: 435 SLRFDGALNVDLTEFQTNLVPYPRI 509
LRF G LN DL + NL+P+PR+
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRL 263
Score = 71.3 bits (167), Expect = 4e-13
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = +1
Query: 10 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 189
A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++
Sbjct: 97 AGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIR 156
Query: 190 VDYGKKSKLEFAIYPAPQV 246
+Y + L F+++P+P+V
Sbjct: 157 EEYPDRMMLTFSVFPSPKV 175
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 69.3 bits (162), Expect = 2e-12
Identities = 31/84 (36%), Positives = 49/84 (58%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VV+PYNS+LT ++DC ++DN A+ I L + PT+ N L+ ++S+ T
Sbjct: 182 VVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLTNPTFAQTNSLVSTVMSASTT 241
Query: 435 SLRFDGALNVDLTEFQTNLVPYPR 506
+LR+ G +N DL +L+P PR
Sbjct: 242 TLRYPGYMNNDLVGLLASLIPTPR 265
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/75 (29%), Positives = 39/75 (52%)
Frame = +1
Query: 10 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 189
A NN+A G++ GK + + ++D I + AD L+GF++ H L+E L+
Sbjct: 100 AGNNWASGYHQ-GKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLN 158
Query: 190 VDYGKKSKLEFAIYP 234
Y KK ++++P
Sbjct: 159 DRYSKKLVQTYSVFP 173
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 68.9 bits (161), Expect = 2e-12
Identities = 31/84 (36%), Positives = 49/84 (58%)
Frame = +3
Query: 255 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 434
VV+PYNS+LT ++DC ++DN A+ I L + PT+ N L+ ++S+ T
Sbjct: 182 VVQPYNSLLTLKRLTLNADCVVVLDNTALGRIAVERLHLTNPTFAQTNSLVSTVMSASTT 241
Query: 435 SLRFDGALNVDLTEFQTNLVPYPR 506
+LR+ G +N DL +L+P PR
Sbjct: 242 TLRYPGYMNNDLVGLLASLIPTPR 265
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/75 (29%), Positives = 39/75 (52%)
Frame = +1
Query: 10 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 189
A NN+A G++ GK + + ++D I + AD L+GF++ H L+E L+
Sbjct: 100 AGNNWASGYHQ-GKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLN 158
Query: 190 VDYGKKSKLEFAIYP 234
Y KK ++++P
Sbjct: 159 DRYSKKLVQTYSVFP 173
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -2
Query: 153 AGTSTEGVEDQESLQTGTLVSELADSVQNQIYD 55
+G TEGVED S LV D ++ QI D
Sbjct: 609 SGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRD 641
>At1g70140.1 68414.m08071 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 760
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +2
Query: 422 LDHCFFEIRRRSECGPHRVPD*LGALPPYHFPLVTYAPV 538
L C RRR GP RV + LPPY P +T A V
Sbjct: 97 LQRCIIARRRRDRVGPVRVEN---TLPPYPPPPMTSAAV 132
>At4g30150.1 68417.m04287 expressed protein
Length = 2009
Score = 28.3 bits (60), Expect = 3.5
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Frame = +3
Query: 216 GVRHLPRASGFHCVV-EPYNSILTTHTTLEHSDCAFMVD-NEAIYDIC-RRNL--DIERP 380
G RH+ + F C+V EP++ L TH T ++ C F+ E D+ NL D +
Sbjct: 287 GDRHVLK---FSCLVLEPFSRFLMTHPTTKNGFCDFLDKLFEPFMDVLGLLNLIEDKNKD 343
Query: 381 TYTNLNRLIGQIVS-SITASLRFDGALNV 464
+L RLI I+S ++ S DG L +
Sbjct: 344 LEISLLRLIEDILSLALFHSAHIDGFLGL 372
>At5g46650.1 68418.m05748 zinc finger (C3HC4-type RING finger)
family protein contains similarity to RING-H2 zinc
finger protein ATL6 [Arabidopsis thaliana] GI:4928403;
contains Pfam profile PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 289
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 276 ILTTHTTLEHSDCAFM-VDNEAIYDICRRNLDIERPTYTNLNRLIGQIV 419
+LTT + H +C +++ +CRRNLD P N+ LI +++
Sbjct: 130 LLTTCYHVFHQECIDQWLESNKTCPVCRRNLDPNAP--ENIKELIIEVI 176
>At5g36930.1 68418.m04427 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1188
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -3
Query: 410 SDETIQVGVGWALNVEITAADVIDGFIVDHESTVRVLK 297
S+E + G L VE+ A +I+ I + EST+++LK
Sbjct: 371 SEEVVTYCAGLPLAVEVLGAFLIERSIREWESTLKLLK 408
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,471,162
Number of Sequences: 28952
Number of extensions: 222569
Number of successful extensions: 687
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 687
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1013649368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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