Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20370
(628 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35161| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_47113| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 33 0.19
SB_10576| Best HMM Match : La (HMM E-Value=6.9e-28) 31 0.58
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045) 31 1.0
SB_58863| Best HMM Match : Fibrinogen_BP (HMM E-Value=2) 31 1.0
SB_54601| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_5458| Best HMM Match : E-MAP-115 (HMM E-Value=0.3) 30 1.3
SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013) 30 1.8
SB_4831| Best HMM Match : E-MAP-115 (HMM E-Value=1.8) 30 1.8
SB_4086| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_36294| Best HMM Match : 7tm_1 (HMM E-Value=6.6e-08) 29 2.3
SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_49594| Best HMM Match : Ribosomal_L5_C (HMM E-Value=2.6) 29 3.1
SB_13208| Best HMM Match : ThiS (HMM E-Value=1.6) 29 3.1
SB_2651| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_57515| Best HMM Match : CBFNT (HMM E-Value=3.3) 29 4.1
SB_4035| Best HMM Match : DUF1279 (HMM E-Value=0.15) 29 4.1
SB_10690| Best HMM Match : Pkinase (HMM E-Value=6.4e-08) 28 5.4
SB_6609| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_56456| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_36607| Best HMM Match : Vicilin_N (HMM E-Value=3.7) 28 5.4
SB_26008| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_31734| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_23258| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_45487| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35) 27 9.4
SB_53904| Best HMM Match : Cyto_heme_lyase (HMM E-Value=9.4) 27 9.4
SB_51729| Best HMM Match : HABP4_PAI-RBP1 (HMM E-Value=1.2) 27 9.4
SB_5549| Best HMM Match : PT (HMM E-Value=1.9) 27 9.4
>SB_35161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 174
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +2
Query: 407 YQPWVIQTYGDQAKTKTITLKKYARILRTLRGE 505
+Q WV YG+ ++TKTIT KY +I R L GE
Sbjct: 13 FQRWVQLNYGENSRTKTITRAKYNKICRYLLGE 45
>SB_47113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1286
Score = 33.5 bits (73), Expect = 0.14
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = +2
Query: 200 TKQDGCRYDQRQGATEEATQDAIPEKTPRKPSKRKSTAGASKADKKNEQNNNKRPKVQTG 379
T +DG D + +T+ A P +K RKS K K++ Q + P+V+
Sbjct: 1003 TAKDGKELDDMEFWLSTSTE-AAPTSGDQKKKTRKSDKTEKKHKKRHRQTQEEEPEVEHA 1061
Query: 380 DPKLD 394
+PK D
Sbjct: 1062 EPKPD 1066
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 33.1 bits (72), Expect = 0.19
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +2
Query: 293 SKRKSTAGASKADKKNEQNNNKRPKVQTGDPKLDLFTTYQPWVIQTYGDQAKTKTITLKK 472
SK+KST+G +K DKK+++ K K G+P+ + W Q D K + L K
Sbjct: 173 SKKKSTSGNNKKDKKDKKGKKKFSKDDIGNPENFQHVGHMGWDPQKGFD---VKNVDLSK 229
Query: 473 Y 475
+
Sbjct: 230 H 230
>SB_10576| Best HMM Match : La (HMM E-Value=6.9e-28)
Length = 711
Score = 31.5 bits (68), Expect = 0.58
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Frame = +2
Query: 239 ATEEATQDAIPEKTPRKPSKRKSTAGASKADKKNEQNNNKR----PKVQTGDP 385
A E ++A PE T KP+ K+ +KAD E+ N+K PK+++ +P
Sbjct: 183 AVESTHEEASPEAT-EKPAVPKAEGQDTKADLSKEEKNSKEQTPTPKIKSPEP 234
>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 224 DQRQGATEEATQDAIPEKTPRKPSKRKSTAGASKADKKNEQNNNKRPKVQT 376
D+ +G TQ + +KTP K + +K +A DKK + K+P +T
Sbjct: 423 DRAKGDRVSQTQGSASKKTPGKAADKKGSAEKKTEDKK-AADKGKKPSAKT 472
>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
Length = 2506
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 224 DQRQGATEEATQDAIPEKTPRKPSKRKSTAGASKADKKNEQNNNKRPK 367
D+R+ E+ Q+ I + + K + S+ DK+ E N+NKR K
Sbjct: 164 DEREKQREKQRQEKIMREQMSRKIKLRIVQKRSEDDKRQESNHNKRKK 211
>SB_58863| Best HMM Match : Fibrinogen_BP (HMM E-Value=2)
Length = 1037
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +2
Query: 242 TEEATQDAIPEKTPRKPSKRKSTAGASKADKKNEQNNNKRPK-VQTGDPKLDLFTTYQPW 418
T + +I K +K KRK A +KAD +E+ +R K ++ P+ T PW
Sbjct: 539 TSLSALQSIKVKPKKKEGKRKRAAKQAKADVISEEVLEQRQKELEEKFPERRELETDAPW 598
Query: 419 VIQTYGDQAKTKTI 460
+ + Q K K +
Sbjct: 599 QMDLFRLQRKVKNL 612
>SB_54601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1718
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 203 KQDGCRYDQRQGATEEATQ-DAIPEKTPRKPSKRKSTAGASKADKKNEQNNNKRPK 367
K DG +++ EE + D IP++ PRK + D+KN NKRPK
Sbjct: 925 KADGVSHEREGDQKEEEIKADDIPKRPPRKKLGHSRSFNTPGTDRKNV---NKRPK 977
>SB_5458| Best HMM Match : E-MAP-115 (HMM E-Value=0.3)
Length = 274
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 224 DQRQGATEEATQDAIPEKTPRKPSKRKSTAGASKADKKNEQNNNKRPK 367
D+R+ E+ Q+ I + + K + S+ DK+ E N+NKR K
Sbjct: 168 DEREKQREKHRQEKIMREQMSRKIKLRIVQKRSEDDKRQESNHNKRKK 215
>SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013)
Length = 440
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/56 (25%), Positives = 26/56 (46%)
Frame = +2
Query: 194 TLTKQDGCRYDQRQGATEEATQDAIPEKTPRKPSKRKSTAGASKADKKNEQNNNKR 361
T KQ+ D EE + K + P+K++S++G +D E+ + K+
Sbjct: 236 TPAKQESSSEDDSSNEEEEKPKKKADVKGKKTPAKQESSSGDDSSDDDEEEKSKKK 291
>SB_4831| Best HMM Match : E-MAP-115 (HMM E-Value=1.8)
Length = 1151
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +2
Query: 191 STLTKQDGCRYDQRQGATEEATQDAIPEKTPRKPSKRKSTAGASKADKKNEQNNNKRPKV 370
+T + +DG + E+T D +P K R +K K +G+ A + + + R K
Sbjct: 795 TTASSEDGLVTRRSTKRKSESTDDDMPSKRSRAHAKDKRASGSRVASSRKQSVSVSRGKA 854
Query: 371 QT 376
T
Sbjct: 855 ST 856
>SB_4086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2235
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 239 ATEEATQDAIPEKTPRKPSKRKSTAGASKADKKNEQNNNKRPKV 370
A + T+D +P K R P R + A + N + KRPKV
Sbjct: 1984 AAAQQTKDRVPAKALRAPGSRLLSMEARPSSPANSLASMKRPKV 2027
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +2
Query: 242 TEEATQDAIPEKT-PRKPSKRKSTAGASKADKKNEQNNNKRPKVQTGDP 385
++ A+ IP T P PS+ S + KK +N PK Q G P
Sbjct: 348 SQSASSPKIPMSTSPTGPSQPNSPTDTQASSKKPTENAATNPKTQPGGP 396
>SB_36294| Best HMM Match : 7tm_1 (HMM E-Value=6.6e-08)
Length = 353
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 492 VRKIRAYFFNVIVLVFAWSPYVCIT 418
VR R F V+ VFAW+PY ++
Sbjct: 230 VRSARLAFMMVLAFVFAWTPYAVVS 254
>SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 29.5 bits (63), Expect = 2.3
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Frame = +2
Query: 212 GCRYDQRQGATEEATQDAIPEKTPRK----PSKRKSTAGASKADKKNEQNNNKRPKV-QT 376
G +Y +R T A E++P K RK K D +NE+NN K PK +T
Sbjct: 518 GPQYRRRGPQTPPLEDFAQFERSPSKGMDDEGPRKRRGQYRKRDHQNEENNTKPPKTSRT 577
Query: 377 GDPKLD 394
P D
Sbjct: 578 SSPSPD 583
>SB_49594| Best HMM Match : Ribosomal_L5_C (HMM E-Value=2.6)
Length = 383
Score = 29.1 bits (62), Expect = 3.1
Identities = 21/94 (22%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = +2
Query: 224 DQRQGATEEATQDAIPEKTPRKPSKRKSTAGASKADKKNEQNNNKRPKVQTGDPKLDL-- 397
+ R+ + EEA D IP K ++++ A +KK + N + + G+ K +
Sbjct: 16 NSRKPSQEEADPDYIPRKDEEGAQQQENETEADDEEKKFCRKNKAKNWSKLGNSKDRVEA 75
Query: 398 -FTTYQPWVIQTYGDQAKTKTITLKKYARILRTL 496
+ + +++ G KT TI + ++I R +
Sbjct: 76 QLSAFWKHLLRPEGGMKKTATIAAEVTSKIYRLM 109
>SB_13208| Best HMM Match : ThiS (HMM E-Value=1.6)
Length = 1119
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +2
Query: 248 EATQDAIPEKTPRKPSKRKSTAGASKAD-----KKNEQNNNKRPKVQT 376
E + D +P ++PR PSKR +SK + KK + PK +T
Sbjct: 175 ELSGDNLPPRSPRSPSKRYPIKPSSKGNSSVYGKKASMEKERLPKTKT 222
>SB_2651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +2
Query: 269 PEKTPRKPSKRKSTAGASKADKKNEQNNNKRPKVQTGDP 385
P+KTP KP K G + AD EQ K+ P
Sbjct: 236 PKKTPHKPKPPKKEQGITPADNLQEQPKGPPSKLPPDVP 274
>SB_57515| Best HMM Match : CBFNT (HMM E-Value=3.3)
Length = 213
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 224 DQRQGA-TEEATQDAIPEKTPR-KPSKRKSTAGASKADKKNEQNNNKRPKVQT 376
+Q GA E A ++ P +T + KP +RK + K D K E+ +K ++ T
Sbjct: 37 EQVSGALVESAETESQPIETSKEKPKRRKISGIFKKGDGKKEKTEDKSKRIST 89
>SB_4035| Best HMM Match : DUF1279 (HMM E-Value=0.15)
Length = 1575
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = +2
Query: 191 STLTKQDGCRYDQRQGATEEATQDAIPEKTPRKPSKRKSTAGASK 325
S++ + DG D R+G E A + A+P+ +P +P+ + A ++K
Sbjct: 262 SSIIQDDGEEED-REGTKEFARECALPKPSPPQPAPKHPCANSNK 305
>SB_10690| Best HMM Match : Pkinase (HMM E-Value=6.4e-08)
Length = 865
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +2
Query: 227 QRQGATEEATQDAIPEKTPRKPSKRKSTAGASKADKKNEQNNNKRPKVQTGD 382
+R E T A P K+P + SKR+S++ A ++ + + +R K ++ D
Sbjct: 318 ERDSKLREKTMVA-PSKSPDRSSKRRSSSRDESARERPDSSYRRRSKSKSPD 368
>SB_6609| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 167
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +2
Query: 239 ATEEATQDAIPEKTPRKPSKRKSTAGASKADKKNEQNNNKRPKVQTGD 382
+T + IP K ++ SK + + K N+ NNKR + D
Sbjct: 118 STSSLANNTIPSKHDKRTSKHDDGSNNKRTSKHNDGYNNKRTIITKHD 165
>SB_56456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1266
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 272 EKTPR-KPSKRKSTAGASKADKKNEQNNNKRPKVQTGD 382
E P+ KP R+STA A + KKN + + +PK D
Sbjct: 572 EALPKIKPQSRQSTAKAPQPKKKNLKTVSMKPKEMEND 609
>SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 272 EKTPRKPSKRKSTAGASKADKKNEQNNNKRPK 367
+K +K K+K K +KKN++N NK K
Sbjct: 20 KKKKQKKKKKKKKKKKKKKNKKNKKNKNKNKK 51
>SB_36607| Best HMM Match : Vicilin_N (HMM E-Value=3.7)
Length = 567
Score = 28.3 bits (60), Expect = 5.4
Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 1/111 (0%)
Frame = +2
Query: 203 KQDGCRYDQRQGATEEATQDAIPEKTPRKPSKRKSTAGASKADKKNEQNNNKR-PKVQTG 379
+QD +RQ + +A++ A P K P+ +K+ + K+ +++Q KR +
Sbjct: 271 EQDKQAARKRQARSSQASRKAKPSK-PQGQAKQAARPSQDKSQDQDKQAARKRQARTSQA 329
Query: 380 DPKLDLFTTYQPWVIQTYGDQAKTKTITLKKYARILRTLRGEEVTVRTAPR 532
PK + + QA KT T K + + R + + +T PR
Sbjct: 330 SPKTNKQQDQDKQAARP--RQASRKTKTSKPQDQDKQATRPRQASHKTKPR 378
>SB_26008| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +2
Query: 272 EKTPRKPSKRKSTAGASKADKKN---EQNNNKRPKVQTGDPKL 391
++ RKP + K+ A ++ +N E NN+K P + +PKL
Sbjct: 348 DEEERKPKEEKTPAASASQLLRNHHKEVNNSKSPATTSSEPKL 390
>SB_31734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 399
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Frame = +2
Query: 278 TPRKPSKRKS-TAGASKADKKNEQNNNKRPKVQTGDPKLDLFTTYQPWVI----QTYGDQ 442
TPR +K AG + KN Q+ KRP ++ DP ++ Y + Q +GDQ
Sbjct: 325 TPRDTRLQKQYKAGQALFRYKNHQSQTKRPSMKCLDPHKEMRIEYHSRALRQSSQPWGDQ 384
>SB_23258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +1
Query: 313 RRIQSRQEKRTEQQQKA 363
RR+ S Q+KRT QQQKA
Sbjct: 36 RRLHSLQQKRTTQQQKA 52
>SB_45487| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1236
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/22 (59%), Positives = 16/22 (72%), Gaps = 2/22 (9%)
Frame = +2
Query: 305 STAGASKAD--KKNEQNNNKRP 364
STA +S D KKN++NNNK P
Sbjct: 72 STAVSSSGDGEKKNQENNNKEP 93
>SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35)
Length = 1338
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 203 KQDGCRYDQRQGATEEATQDAIPEKTPRKPSKRKSTAGA-SKADKKNEQNNNKR 361
++D + G+T + + E T KP K S SK+DKKN + ++R
Sbjct: 812 QKDNSQSSSPNGSTSSSKDEC--ESTKEKPEKHTSRPRHDSKSDKKNSDDKHRR 863
>SB_53904| Best HMM Match : Cyto_heme_lyase (HMM E-Value=9.4)
Length = 259
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/86 (20%), Positives = 38/86 (44%)
Frame = +2
Query: 254 TQDAIPEKTPRKPSKRKSTAGASKADKKNEQNNNKRPKVQTGDPKLDLFTTYQPWVIQTY 433
TQ A+PEK K K K + S D + + ++ RP D + P +
Sbjct: 15 TQKALPEKLQTKLRKEKKASQKSHQDARFKLVSSNRPSQADALHSTDEPCSTAPLAVDE- 73
Query: 434 GDQAKTKTITLKKYARILRTLRGEEV 511
D ++ ++ ++ + ++ +R E++
Sbjct: 74 -DSSEFQSDEVQNFFKVYDVIRDEDI 98
>SB_51729| Best HMM Match : HABP4_PAI-RBP1 (HMM E-Value=1.2)
Length = 519
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 191 STLTKQDGCRYDQRQGATEEATQDAIPEKTPRKPSKRKSTAG 316
+TL K++G Q +G +EA + K R P+KR+S G
Sbjct: 24 TTLQKEEG----QGEGQRQEAPYNLSKRKRSRSPTKRRSGGG 61
>SB_5549| Best HMM Match : PT (HMM E-Value=1.9)
Length = 282
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/58 (24%), Positives = 25/58 (43%)
Frame = +2
Query: 224 DQRQGATEEATQDAIPEKTPRKPSKRKSTAGASKADKKNEQNNNKRPKVQTGDPKLDL 397
D+ + E+ +D +K KP + K + K E K+PK ++ D D+
Sbjct: 130 DRPEEKPEDRPEDHPEDKPDDKPEDKPEDKPEDKLEGKPENKPEKKPKAKSEDKPEDM 187
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,286,106
Number of Sequences: 59808
Number of extensions: 369086
Number of successful extensions: 1856
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1851
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1560464625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -