Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20370
(628 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 25 0.80
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 25 0.80
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 24 1.1
AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced prot... 23 1.8
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 23 3.2
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 22 4.3
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 22 4.3
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 4.3
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 4.3
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 5.6
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 22 5.6
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 21 7.4
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 7.4
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 21 7.4
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 21 9.8
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 9.8
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 24.6 bits (51), Expect = 0.80
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +2
Query: 221 YDQRQGATEEATQDAIPEKTPRKPSKRKSTAGASKADKKNEQNNN 355
Y + + ++E +QD +T ++P S + K N NNN
Sbjct: 56 YRKYRETSKERSQDRTERETSKEPKIISSLSNNYKYSNYNNYNNN 100
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 24.6 bits (51), Expect = 0.80
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +2
Query: 221 YDQRQGATEEATQDAIPEKTPRKPSKRKSTAGASKADKKNEQNNN 355
Y + + ++E +QD +T ++P S + K N NNN
Sbjct: 56 YRKYRETSKERSQDRTERETSKEPKIISSLSNNYKYSNYNNYNNN 100
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 24.2 bits (50), Expect = 1.1
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 248 EATQDAIPEKTPRKPSKRKS-TAGASKADKKNEQNNN 355
EAT A+ +T ++ S + TAG + + N NNN
Sbjct: 208 EATAGAVVLETCQRNSNNSTITAGNANTNASNNNNNN 244
>AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced protein
75 protein.
Length = 87
Score = 23.4 bits (48), Expect = 1.8
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 519 GQLQDSFLGQSEGFLR 566
GQ + F+G S+GF R
Sbjct: 28 GQTDEGFVGDSQGFFR 43
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 22.6 bits (46), Expect = 3.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 438 TRQKPRRLH*KNTRGSCVRYAARR 509
T+ P+R+H TRG +Y A R
Sbjct: 36 TKLGPQRIHTVRTRGGNKKYRALR 59
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 22.2 bits (45), Expect = 4.3
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 284 RKPSKRKSTAGASKADKKNEQNNNKRPKVQTGDPKLDLFTT 406
RK SK++ G AD +E+ + RP +T D +TT
Sbjct: 27 RKLSKKQQMLGIW-ADDSDEEELSARPSFKTFDKGPKNYTT 66
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 22.2 bits (45), Expect = 4.3
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -2
Query: 174 TKVYYKVVAQHYNIKKY 124
TK+ + + QHYN+ +Y
Sbjct: 60 TKIDFGLSIQHYNVDEY 76
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.2 bits (45), Expect = 4.3
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -2
Query: 501 PRSVRKIRAYFFNVIVLVFAWSPYVCITQG 412
PR +RK + F ++ V CIT+G
Sbjct: 408 PRLLRKRKELFIAIVCFVSYLIGLFCITEG 437
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.2 bits (45), Expect = 4.3
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -2
Query: 501 PRSVRKIRAYFFNVIVLVFAWSPYVCITQG 412
PR +RK + F ++ V CIT+G
Sbjct: 461 PRLLRKRKELFIAIVCFVSYLIGLFCITEG 490
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.8 bits (44), Expect = 5.6
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 387 NSICSRRTSPG*YKRTATRQKPR 455
N CS PG +T+TR+ PR
Sbjct: 683 NCNCSMDWLPGINNQTSTREYPR 705
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 21.8 bits (44), Expect = 5.6
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -3
Query: 314 RPSICVWTAFAGSSP 270
RPS C W A +SP
Sbjct: 8 RPSYCTWELNATNSP 22
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.4
Identities = 10/46 (21%), Positives = 22/46 (47%)
Frame = +2
Query: 218 RYDQRQGATEEATQDAIPEKTPRKPSKRKSTAGASKADKKNEQNNN 355
+Y + + ++E ++D + R+P S + + + N NNN
Sbjct: 55 KYRKYRERSKERSRDRTERERSREPKIISSLSNKTIHNNNNYNNNN 100
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.4 bits (43), Expect = 7.4
Identities = 10/46 (21%), Positives = 22/46 (47%)
Frame = +2
Query: 218 RYDQRQGATEEATQDAIPEKTPRKPSKRKSTAGASKADKKNEQNNN 355
+Y + + ++E ++D + R+P S + + + N NNN
Sbjct: 55 KYRKYRERSKERSRDRTERERSREPKIISSLSNKTIHNNNNYNNNN 100
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 21.4 bits (43), Expect = 7.4
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +1
Query: 1 RHEATCGRSCTRGIAFRSVFPRRELRTTIR 90
R+ A C SVF R+++ T IR
Sbjct: 89 RYGALCKEEALWNFPMISVFSRQDIETIIR 118
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 21.0 bits (42), Expect = 9.8
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 229 ATGGYGRSYSRRDPGEDPAKAVQ 297
A GG RSY EDP +AV+
Sbjct: 600 AGGGGARSYVDPHTYEDPNQAVR 622
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1
Query: 541 WVKAKGFYVGKPPG 582
WV+A G VG PG
Sbjct: 37 WVRADGSAVGDVPG 50
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,885
Number of Sequences: 438
Number of extensions: 3344
Number of successful extensions: 20
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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