Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20367
(802 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 154 7e-38
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 126 3e-29
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 125 5e-29
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 122 3e-28
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 120 2e-27
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 51 1e-06
SB_40385| Best HMM Match : Kelch_1 (HMM E-Value=0) 34 0.12
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_34832| Best HMM Match : SAP (HMM E-Value=1.4e-07) 30 2.5
SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 29 3.3
SB_57638| Best HMM Match : F5_F8_type_C (HMM E-Value=1.7e-11) 29 3.3
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 154 bits (374), Expect = 7e-38
Identities = 70/82 (85%), Positives = 78/82 (95%)
Frame = +3
Query: 9 EKSQIFSTASDNQHTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGIPQIEVTFEIDA 188
+KSQ+FSTA+DNQ+TVTIQV+EGERPMTKDNH LGKFDL GIPPAPRG+PQIEVTFEID
Sbjct: 1118 KKSQVFSTAADNQNTVTIQVFEGERPMTKDNHPLGKFDLNGIPPAPRGVPQIEVTFEIDV 1177
Query: 189 NGILQVSAEDKGTGNREKIVIT 254
NGIL+VSAEDKGTGN+EKI IT
Sbjct: 1178 NGILRVSAEDKGTGNKEKITIT 1199
Score = 106 bits (254), Expect = 2e-23
Identities = 54/113 (47%), Positives = 73/113 (64%)
Frame = +2
Query: 221 GNRKQRKNCNHYDQNRLTPEDIERMIXXXXXXXXXXXXXXXRVESRNELESYAYSIKNQL 400
GN+++ N DQNRLTPEDIERM+ +VE+RNELESYAYS+KNQ+
Sbjct: 1191 GNKEKITITN--DQNRLTPEDIERMVNDAEKFADEDKKTKEKVEARNELESYAYSLKNQV 1248
Query: 401 QDKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAELKNTXXXXXXLKM*CSP 559
DKEKLG K+++DDK + EA++ AI W++ NQDA +++ KM SP
Sbjct: 1249 GDKEKLGGKLSEDDKKTITEAVEKAISWMDKNQDASVEDFKKEKRKWKMLYSP 1301
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 126 bits (303), Expect = 3e-29
Identities = 58/80 (72%), Positives = 68/80 (85%)
Frame = +3
Query: 15 SQIFSTASDNQHTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGIPQIEVTFEIDANG 194
+Q F+T SDNQ VTI+V+EGERP+TK N+LLGKFDL+GIPPAPRG+PQIEVTF+IDANG
Sbjct: 426 TQTFTTYSDNQPAVTIRVFEGERPLTKHNNLLGKFDLSGIPPAPRGVPQIEVTFDIDANG 485
Query: 195 ILQVSAEDKGTGNREKIVIT 254
IL VSA+DK TG I IT
Sbjct: 486 ILNVSAKDKSTGKTGSITIT 505
Score = 58.0 bits (134), Expect = 8e-09
Identities = 30/101 (29%), Positives = 51/101 (50%)
Frame = +2
Query: 257 DQNRLTPEDIERMIXXXXXXXXXXXXXXXRVESRNELESYAYSIKNQLQDKEKLGAKVTD 436
D+ RL+ E+I+RMI ++ +RN LESYA+ +K+ + + L K++
Sbjct: 507 DKGRLSKEEIDRMINDAEKYKSEDEAQREKIAARNRLESYAFGVKSAISE-PSLEGKLSQ 565
Query: 437 DDKAKMEEALDAAIKWLEDNQDAELKNTXXXXXXLKM*CSP 559
DK ++ ++ + WLE N AE + L+ CSP
Sbjct: 566 SDKDTVKNKVEEVLNWLEKNSLAEKEEFEEQEKELQRVCSP 606
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 125 bits (301), Expect = 5e-29
Identities = 56/82 (68%), Positives = 70/82 (85%)
Frame = +3
Query: 9 EKSQIFSTASDNQHTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGIPQIEVTFEIDA 188
+++Q F+T SDNQ +V IQVYEGER +TKDN+LLGKF+L+GIPPAPRG+PQI+VTF++D+
Sbjct: 517 KQTQTFTTYSDNQTSVLIQVYEGERSLTKDNNLLGKFELSGIPPAPRGVPQIDVTFDVDS 576
Query: 189 NGILQVSAEDKGTGNREKIVIT 254
NGIL VSA DK TG KI IT
Sbjct: 577 NGILNVSAVDKSTGKENKITIT 598
Score = 72.1 bits (169), Expect = 5e-13
Identities = 38/110 (34%), Positives = 61/110 (55%)
Frame = +2
Query: 230 KQRKNCNHYDQNRLTPEDIERMIXXXXXXXXXXXXXXXRVESRNELESYAYSIKNQLQDK 409
K+ K D+ RL+ EDIERM+ R++S+N LESYA+S+K+ ++D
Sbjct: 591 KENKITITNDKGRLSKEDIERMVKEAEKFKAADEAVRERIQSKNSLESYAFSMKSTMED- 649
Query: 410 EKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAELKNTXXXXXXLKM*CSP 559
EK+ K+++D++ K+ A + WLE NQ AE + L+ C+P
Sbjct: 650 EKVKDKLSEDEREKVISRCKATLDWLEHNQSAEKEEIDAHQKELEGVCNP 699
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 122 bits (295), Expect = 3e-28
Identities = 58/82 (70%), Positives = 67/82 (81%)
Frame = +3
Query: 9 EKSQIFSTASDNQHTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGIPQIEVTFEIDA 188
+++Q F+T SDNQ V IQV+EGER MT N+LLGKF+LTGIPPAPRG+PQIEVTF+IDA
Sbjct: 425 KQTQTFTTYSDNQPGVLIQVFEGERSMTAHNNLLGKFELTGIPPAPRGVPQIEVTFDIDA 484
Query: 189 NGILQVSAEDKGTGNREKIVIT 254
NGIL VSA DK TG KI IT
Sbjct: 485 NGILNVSAVDKSTGKENKITIT 506
Score = 69.7 bits (163), Expect = 3e-12
Identities = 36/110 (32%), Positives = 60/110 (54%)
Frame = +2
Query: 230 KQRKNCNHYDQNRLTPEDIERMIXXXXXXXXXXXXXXXRVESRNELESYAYSIKNQLQDK 409
K+ K D+ RL+ EDIERM+ R++++N LESYAYS+K+ ++D
Sbjct: 499 KENKITITNDKGRLSKEDIERMVNEASKYKEEDEKQRDRIQTKNSLESYAYSMKSTVED- 557
Query: 410 EKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAELKNTXXXXXXLKM*CSP 559
+K+ K++++DK + + +KWL+ NQ AE L+ C+P
Sbjct: 558 DKVKDKISEEDKKAILDKCTEVLKWLDTNQTAEKDEFEYHQKELEKVCNP 607
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 120 bits (288), Expect = 2e-27
Identities = 54/81 (66%), Positives = 67/81 (82%)
Frame = +3
Query: 9 EKSQIFSTASDNQHTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGIPQIEVTFEIDA 188
+KSQ+FSTA+D Q V I+V++GER M DN LLG+F L GIPPAPRG+PQ+EVTF+IDA
Sbjct: 229 KKSQVFSTAADGQTQVEIKVFQGEREMAIDNKLLGQFQLVGIPPAPRGVPQVEVTFDIDA 288
Query: 189 NGILQVSAEDKGTGNREKIVI 251
NGI+ VSA DKGTG ++IVI
Sbjct: 289 NGIVNVSARDKGTGREQQIVI 309
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 50.8 bits (116), Expect = 1e-06
Identities = 23/39 (58%), Positives = 30/39 (76%)
Frame = +3
Query: 9 EKSQIFSTASDNQHTVTIQVYEGERPMTKDNHLLGKFDL 125
+KSQ+FSTA+D Q V I+V++GER M DN LLG+F L
Sbjct: 174 KKSQVFSTAADGQTQVEIKVFQGEREMAIDNKLLGQFQL 212
>SB_40385| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 823
Score = 34.3 bits (75), Expect = 0.12
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +2
Query: 344 RVESRNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQD 502
+ E++ EL++ S K + D +K + T DD+ D +WLE+N D
Sbjct: 732 KAEAQFELKALITSTKETIADPDKHMGRFTKDDRVSGNRYCDEKSEWLENNAD 784
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 33.1 bits (72), Expect = 0.27
Identities = 15/49 (30%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Frame = +2
Query: 353 SRNELESYAYSIKNQLQDKEKLGAKV-TDDDKAKMEEALDAAIKWLEDN 496
++N LES+ + +++++ + LG K+ T+ ++ + EAL AA WL+++
Sbjct: 719 AKNALESHIFGVRDEMNSE--LGEKLSTEAERETISEALTAASDWLDED 765
>SB_34832| Best HMM Match : SAP (HMM E-Value=1.4e-07)
Length = 1054
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/51 (29%), Positives = 31/51 (60%)
Frame = +2
Query: 356 RNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAE 508
+N +E + + +NQ + ++K K TD+DKAK EE +++ ++++ E
Sbjct: 928 QNIMELFEHDSENQKRSEQK--NKHTDEDKAKAEEMQKQSLETFKESRKRE 976
>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
Length = 1279
Score = 29.5 bits (63), Expect = 3.3
Identities = 33/132 (25%), Positives = 62/132 (46%), Gaps = 6/132 (4%)
Frame = +2
Query: 344 RVESRNELESYAYSIKNQLQDKEKLGAKVTDDDKA-----KMEEALDAAIKWLEDNQDAE 508
+ E + + A NQLQ EKLGA + D DKA +++E L A ++ D A
Sbjct: 365 KAEEEKKAKRDANDHVNQLQ--EKLGAAMRDLDKANDHVNQLKEKLGAVMR---DLDKAN 419
Query: 509 LKNTXXXXXXLKM*CSPSSPNFTKARVEYRPRG-RRKMTTSRTSCNQTESQPNVISAQMA 685
+N ++ + + +E + +G R++ R++ N+ E++ V+S ++
Sbjct: 420 ERNKELNESVIQTQSEKDTIKHSLHMMEEQYKGLRQQQEDHRSTVNELETKLEVLSKKL- 478
Query: 686 AIVLRGECPTHD 721
+V E TH+
Sbjct: 479 -LVANEEKSTHE 489
>SB_57638| Best HMM Match : F5_F8_type_C (HMM E-Value=1.7e-11)
Length = 502
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +3
Query: 102 HLLGKFDLTGIPPAPRGIPQIEVTFEIDANGILQVSAEDK 221
HLL G P +PR + Q VTF D + +DK
Sbjct: 222 HLLSAVATQGSPHSPRWVTQYYVTFSYDKENWFEYKVKDK 261
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,082,785
Number of Sequences: 59808
Number of extensions: 429358
Number of successful extensions: 1228
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1222
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2215746665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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