Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20367
         (802 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302660-1|CAC35525.1|  195|Anopheles gambiae hypothetical prote...    27   0.67 
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    26   1.2  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     25   3.6  
AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    24   6.3  

>AJ302660-1|CAC35525.1|  195|Anopheles gambiae hypothetical protein
           protein.
          Length = 195

 Score = 27.1 bits (57), Expect = 0.67
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +2

Query: 344 RVESRNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEALDAA 475
           RV +   L+ Y  +I N   +  ++   VTD D AK+E  L  A
Sbjct: 69  RVNTSTGLDDYGTNITNVQINVNRMRRAVTDADLAKLERKLRQA 112


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +2

Query: 422 AKVTDDDKAKMEEALDAAIKWLEDN 496
           A  TD+ +A+ EEA+D   +W++ +
Sbjct: 728 ATTTDEVRARAEEAVDQVQRWMQQH 752


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +3

Query: 75  GERPMTKDN-HLLGKFDLTGIPPAPRGIPQIEVT 173
           GE  +  D  H++GK     +PP P   P +E+T
Sbjct: 20  GESDLLDDIIHVIGKDIREEMPPVPNQRPYVEIT 53


>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -1

Query: 199 KIPLASISNVTSICGIPRGAGGIPVKSNLPSK 104
           K+P+  +S VT    +  G    PV+ N+PS+
Sbjct: 398 KLPVKLVSVVTGAGKVQIGWSVCPVRINIPSR 429


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 726,924
Number of Sequences: 2352
Number of extensions: 13459
Number of successful extensions: 29
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84408009
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)