Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20367
(802 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 151 6e-37
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 151 6e-37
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 138 6e-33
M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 136 2e-32
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 128 6e-30
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 126 2e-29
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 120 9e-28
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 120 9e-28
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 120 2e-27
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 117 1e-26
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 57 2e-08
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 57 2e-08
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 53 2e-07
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 37 0.019
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 37 0.019
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 34 0.10
U29613-3|AAC47062.2| 483|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z50872-3|CAA90756.1| 238|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z50872-2|CAA90755.1| 273|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z74035-3|CAA98481.1| 808|Caenorhabditis elegans Hypothetical pr... 28 8.9
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 151 bits (366), Expect = 6e-37
Identities = 68/82 (82%), Positives = 76/82 (92%)
Frame = +3
Query: 9 EKSQIFSTASDNQHTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGIPQIEVTFEIDA 188
+KSQ+FSTA+DNQ TVTIQV+EGERPMTKDNH LGKFDLTG+PPAPRG+PQIEVTFEID
Sbjct: 451 KKSQVFSTAADNQPTVTIQVFEGERPMTKDNHQLGKFDLTGLPPAPRGVPQIEVTFEIDV 510
Query: 189 NGILQVSAEDKGTGNREKIVIT 254
NGIL V+AEDKGTGN+ KI IT
Sbjct: 511 NGILHVTAEDKGTGNKNKITIT 532
Score = 97.9 bits (233), Expect = 7e-21
Identities = 45/83 (54%), Positives = 58/83 (69%)
Frame = +2
Query: 257 DQNRLTPEDIERMIXXXXXXXXXXXXXXXRVESRNELESYAYSIKNQLQDKEKLGAKVTD 436
DQNRL+PEDIERMI + E+RNELESYAY++KNQ++DKEKLG K+ +
Sbjct: 534 DQNRLSPEDIERMINDAEKFAEDDKKVKDKAEARNELESYAYNLKNQIEDKEKLGGKLDE 593
Query: 437 DDKAKMEEALDAAIKWLEDNQDA 505
DDK +EEA++ AI WL N +A
Sbjct: 594 DDKKTIEEAVEEAISWLGSNAEA 616
Score = 36.3 bits (80), Expect = 0.026
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +1
Query: 508 AEEYKKQKKTLEDVVQPIIAKLY 576
AEE K+QKK LE VQPI++KLY
Sbjct: 618 AEELKEQKKDLESKVQPIVSKLY 640
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 151 bits (366), Expect = 6e-37
Identities = 68/82 (82%), Positives = 76/82 (92%)
Frame = +3
Query: 9 EKSQIFSTASDNQHTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGIPQIEVTFEIDA 188
+KSQ+FSTA+DNQ TVTIQV+EGERPMTKDNH LGKFDLTG+PPAPRG+PQIEVTFEID
Sbjct: 451 KKSQVFSTAADNQPTVTIQVFEGERPMTKDNHQLGKFDLTGLPPAPRGVPQIEVTFEIDV 510
Query: 189 NGILQVSAEDKGTGNREKIVIT 254
NGIL V+AEDKGTGN+ KI IT
Sbjct: 511 NGILHVTAEDKGTGNKNKITIT 532
Score = 95.5 bits (227), Expect = 4e-20
Identities = 44/83 (53%), Positives = 57/83 (68%)
Frame = +2
Query: 257 DQNRLTPEDIERMIXXXXXXXXXXXXXXXRVESRNELESYAYSIKNQLQDKEKLGAKVTD 436
DQNRL+PEDIE MI + E+RNELESYAY++KNQ++DKEKLG K+ +
Sbjct: 534 DQNRLSPEDIEAMINDAEKFAEDDKKVKDKAEARNELESYAYNLKNQIEDKEKLGGKLDE 593
Query: 437 DDKAKMEEALDAAIKWLEDNQDA 505
DDK +EEA++ AI WL N +A
Sbjct: 594 DDKKTIEEAVEEAISWLGSNAEA 616
Score = 36.3 bits (80), Expect = 0.026
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +1
Query: 508 AEEYKKQKKTLEDVVQPIIAKLY 576
AEE K+QKK LE VQPI++KLY
Sbjct: 618 AEELKEQKKDLESKVQPIVSKLY 640
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 138 bits (333), Expect = 6e-33
Identities = 61/82 (74%), Positives = 71/82 (86%)
Frame = +3
Query: 9 EKSQIFSTASDNQHTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGIPQIEVTFEIDA 188
+KSQ+FSTA+D+Q V+I +YEGERPM DNH LG FD+TGIPPAPRG+PQIEVTFEID
Sbjct: 448 KKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVPQIEVTFEIDV 507
Query: 189 NGILQVSAEDKGTGNREKIVIT 254
NGIL VSAEDKGTGN+ K+ IT
Sbjct: 508 NGILHVSAEDKGTGNKNKLTIT 529
Score = 99.1 bits (236), Expect = 3e-21
Identities = 49/95 (51%), Positives = 62/95 (65%)
Frame = +2
Query: 221 GNRKQRKNCNHYDQNRLTPEDIERMIXXXXXXXXXXXXXXXRVESRNELESYAYSIKNQL 400
GN+ + N D NRL+PEDIERMI +VESRNELE+YAY +K Q+
Sbjct: 521 GNKNKLTITN--DHNRLSPEDIERMINDADKFAADDQAQKEKVESRNELEAYAYQMKTQI 578
Query: 401 QDKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDA 505
DKEKLG K+TD+DK +E A++ AI+WL NQDA
Sbjct: 579 ADKEKLGGKLTDEDKVSIESAVERAIEWLGSNQDA 613
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +1
Query: 511 EEYKKQKKTLEDVVQPIIAKLY 576
EE K+QKK LE VVQPI++KLY
Sbjct: 616 EENKEQKKELESVVQPIVSKLY 637
>M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein (
C.elegans heat shockprotein 4 gene, 3' end. ).
Length = 288
Score = 136 bits (328), Expect = 2e-32
Identities = 60/82 (73%), Positives = 70/82 (85%)
Frame = +3
Query: 9 EKSQIFSTASDNQHTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGIPQIEVTFEIDA 188
+KSQ+F TA+D+Q V+I +YEGERPM DNH LG FD+TGIPPAPRG+PQIEVTFEID
Sbjct: 79 KKSQVFPTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVPQIEVTFEIDV 138
Query: 189 NGILQVSAEDKGTGNREKIVIT 254
NGIL VSAEDKGTGN+ K+ IT
Sbjct: 139 NGILHVSAEDKGTGNKNKLTIT 160
Score = 100 bits (239), Expect = 1e-21
Identities = 50/95 (52%), Positives = 62/95 (65%)
Frame = +2
Query: 221 GNRKQRKNCNHYDQNRLTPEDIERMIXXXXXXXXXXXXXXXRVESRNELESYAYSIKNQL 400
GN+ + N D NRL+PEDIERMI +VESRNELE+YAY IK Q+
Sbjct: 152 GNKNKLTITN--DHNRLSPEDIERMINDADKFAADDQAQKEKVESRNELEAYAYQIKTQI 209
Query: 401 QDKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDA 505
DKEKLG K+TD+DK +E A++ AI+WL NQDA
Sbjct: 210 ADKEKLGGKLTDEDKVSIESAVERAIEWLGSNQDA 244
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +1
Query: 511 EEYKKQKKTLEDVVQPIIAKLY 576
EE K+QKK LE VVQPI++KLY
Sbjct: 247 EENKEQKKELESVVQPIVSKLY 268
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 128 bits (308), Expect = 6e-30
Identities = 60/80 (75%), Positives = 68/80 (85%)
Frame = +3
Query: 15 SQIFSTASDNQHTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGIPQIEVTFEIDANG 194
+Q F+T SDNQ V IQVYEGER MTKDN+LLGKF+L+GIPPAPRG+PQIEVTF+IDANG
Sbjct: 426 AQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANG 485
Query: 195 ILQVSAEDKGTGNREKIVIT 254
IL VSA DK TG + KI IT
Sbjct: 486 ILNVSATDKSTGKQNKITIT 505
Score = 72.1 bits (169), Expect = 4e-13
Identities = 36/93 (38%), Positives = 55/93 (59%)
Frame = +2
Query: 230 KQRKNCNHYDQNRLTPEDIERMIXXXXXXXXXXXXXXXRVESRNELESYAYSIKNQLQDK 409
KQ K D+ RL+ +DIERM+ R+ ++N LESYA+++K ++D
Sbjct: 498 KQNKITITNDKGRLSKDDIERMVNEAEKYKADDEAQKDRIGAKNGLESYAFNLKQTIED- 556
Query: 410 EKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAE 508
EKL K++ +DK K+E+ D +KWL+ NQ AE
Sbjct: 557 EKLKDKISPEDKKKIEDKCDEILKWLDSNQTAE 589
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 511 EEYKKQKKTLEDVVQPIIAKLY 576
EE++ Q+K LE + PII+KLY
Sbjct: 591 EEFEHQQKDLEGLANPIISKLY 612
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 126 bits (303), Expect = 2e-29
Identities = 59/80 (73%), Positives = 68/80 (85%)
Frame = +3
Query: 15 SQIFSTASDNQHTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGIPQIEVTFEIDANG 194
+Q F+T SDNQ V IQVYEGER MTKDN+LLGKF+L+GIPPAPRG+PQIEVTF+IDANG
Sbjct: 426 AQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANG 485
Query: 195 ILQVSAEDKGTGNREKIVIT 254
IL VSA DK TG ++I IT
Sbjct: 486 ILNVSATDKSTGKAKQITIT 505
Score = 69.3 bits (162), Expect = 3e-12
Identities = 32/84 (38%), Positives = 52/84 (61%)
Frame = +2
Query: 257 DQNRLTPEDIERMIXXXXXXXXXXXXXXXRVESRNELESYAYSIKNQLQDKEKLGAKVTD 436
D++R + +DIERM+ R+ ++N LESYA+++K ++D EKL K++
Sbjct: 507 DKDRFSKDDIERMVNEAEKYKADDEAQKDRIGAKNGLESYAFNLKQTIED-EKLKDKISP 565
Query: 437 DDKAKMEEALDAAIKWLEDNQDAE 508
+DK K+E+ D +KWL+ NQ AE
Sbjct: 566 EDKKKIEDKCDEILKWLDSNQTAE 589
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 120 bits (290), Expect = 9e-28
Identities = 55/76 (72%), Positives = 64/76 (84%)
Frame = +3
Query: 24 FSTASDNQHTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGIPQIEVTFEIDANGILQ 203
F+T +DNQ V+IQVYEGER MT+DNH LG F+L+GIPPAPRG+PQIEVTF+IDANGIL
Sbjct: 429 FTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVPQIEVTFDIDANGILN 488
Query: 204 VSAEDKGTGNREKIVI 251
VSAEDK TG +I I
Sbjct: 489 VSAEDKSTGKSNRITI 504
Score = 60.9 bits (141), Expect = 1e-09
Identities = 31/99 (31%), Positives = 53/99 (53%)
Frame = +2
Query: 257 DQNRLTPEDIERMIXXXXXXXXXXXXXXXRVESRNELESYAYSIKNQLQDKEKLGAKVTD 436
++ RLT DI+RM+ RV++RN+LE+YA+ IK L ++ +K++
Sbjct: 507 EKGRLTQSDIDRMVHEAKQFEKEDGEQRERVQARNQLEAYAFQIKQAL---DEYSSKLST 563
Query: 437 DDKAKMEEALDAAIKWLEDNQDAELKNTXXXXXXLKM*C 553
+D ++ +EA+D ++WL+ N AE LK C
Sbjct: 564 EDASRAKEAVDETLRWLDSNSLAEKDEIEAKDKELKSVC 602
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 120 bits (290), Expect = 9e-28
Identities = 55/76 (72%), Positives = 64/76 (84%)
Frame = +3
Query: 24 FSTASDNQHTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGIPQIEVTFEIDANGILQ 203
F+T +DNQ V+IQVYEGER MT+DNH LG F+L+GIPPAPRG+PQIEVTF+IDANGIL
Sbjct: 429 FTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVPQIEVTFDIDANGILN 488
Query: 204 VSAEDKGTGNREKIVI 251
VSAEDK TG +I I
Sbjct: 489 VSAEDKSTGKSNRITI 504
Score = 60.9 bits (141), Expect = 1e-09
Identities = 31/99 (31%), Positives = 53/99 (53%)
Frame = +2
Query: 257 DQNRLTPEDIERMIXXXXXXXXXXXXXXXRVESRNELESYAYSIKNQLQDKEKLGAKVTD 436
++ RLT DI+RM+ RV++RN+LE+YA+ IK L ++ +K++
Sbjct: 507 EKGRLTQSDIDRMVHEAKQFEKEDGEQRERVQARNQLEAYAFQIKQAL---DEYSSKLST 563
Query: 437 DDKAKMEEALDAAIKWLEDNQDAELKNTXXXXXXLKM*C 553
+D ++ +EA+D ++WL+ N AE LK C
Sbjct: 564 EDASRAKEAVDETLRWLDSNSLAEKDEIEAKDKELKSVC 602
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 120 bits (288), Expect = 2e-27
Identities = 54/79 (68%), Positives = 65/79 (82%)
Frame = +3
Query: 15 SQIFSTASDNQHTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGIPQIEVTFEIDANG 194
S+ F+T +DNQ V+IQVYEGER MT+DNH LG F+LTGIPPAPRG+PQ++VTF+IDANG
Sbjct: 426 SKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELTGIPPAPRGVPQVDVTFDIDANG 485
Query: 195 ILQVSAEDKGTGNREKIVI 251
IL VSA DK TG +I I
Sbjct: 486 ILNVSAADKSTGRSNRITI 504
Score = 52.0 bits (119), Expect = 5e-07
Identities = 27/99 (27%), Positives = 51/99 (51%)
Frame = +2
Query: 257 DQNRLTPEDIERMIXXXXXXXXXXXXXXXRVESRNELESYAYSIKNQLQDKEKLGAKVTD 436
++ RL+ DI+RM+ R+ SRN+LE+YA+ +K L E+ G+ ++
Sbjct: 507 EKGRLSQADIDRMVNEAKQFEREDAAQRDRISSRNQLEAYAFQVKQAL---EEHGSLLSA 563
Query: 437 DDKAKMEEALDAAIKWLEDNQDAELKNTXXXXXXLKM*C 553
+D + ++A++ ++W+E N A+ LK C
Sbjct: 564 EDAKRAKDAVEDTLRWMERNTLADKDEIEAKDKELKSIC 602
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 117 bits (281), Expect = 1e-26
Identities = 52/81 (64%), Positives = 66/81 (81%)
Frame = +3
Query: 9 EKSQIFSTASDNQHTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGIPQIEVTFEIDA 188
+KSQ+FSTA+D Q V I+V++GER M N LLG+F L GIPPAPRG+PQ+EVTF+IDA
Sbjct: 446 KKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVPQVEVTFDIDA 505
Query: 189 NGILQVSAEDKGTGNREKIVI 251
NGI+ VSA D+GTG ++IVI
Sbjct: 506 NGIVNVSARDRGTGKEQQIVI 526
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/72 (40%), Positives = 41/72 (56%)
Frame = +3
Query: 12 KSQIFSTASDNQHTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGIPQIEVTFEIDAN 191
K + F + D Q ++ + VYEGER + N LG+ L I P RG +++T E+D N
Sbjct: 420 KRKTFINSDDFQTSINVPVYEGERVLCSHNRQLGEISLP-IQPKRRGESVVDITLEVDYN 478
Query: 192 GILQVSAEDKGT 227
GILQ +A D T
Sbjct: 479 GILQATALDLNT 490
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/72 (40%), Positives = 41/72 (56%)
Frame = +3
Query: 12 KSQIFSTASDNQHTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGIPQIEVTFEIDAN 191
K + F + D Q ++ + VYEGER + N LG+ L I P RG +++T E+D N
Sbjct: 420 KRKTFINSDDFQTSINVPVYEGERVLCSHNRQLGEISLP-IQPKRRGESVVDITLEVDYN 478
Query: 192 GILQVSAEDKGT 227
GILQ +A D T
Sbjct: 479 GILQATALDLNT 490
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +3
Query: 9 EKSQIFSTASDNQHTVTIQVYEGERPMTKDNHLLGKFDLTGI 134
+KSQ+FSTA+D Q V I+V++GER M N LLG+F L GI
Sbjct: 446 KKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVGI 487
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 36.7 bits (81), Expect = 0.019
Identities = 21/79 (26%), Positives = 34/79 (43%)
Frame = +2
Query: 344 RVESRNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAELKNTX 523
R E+ N LE Y + +L+D E+ T+++K + E + W ED+ E K
Sbjct: 650 REEAMNRLEGLLYDLAVRLEDGEEYAEYATEEEKKAILEEVAVLKLWFEDDVSLETKKEE 709
Query: 524 XXXXXLKM*CSPSSPNFTK 580
K+ + PN K
Sbjct: 710 FDEKRAKLEELTAKPNARK 728
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 36.7 bits (81), Expect = 0.019
Identities = 21/79 (26%), Positives = 34/79 (43%)
Frame = +2
Query: 344 RVESRNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDNQDAELKNTX 523
R E+ N LE Y + +L+D E+ T+++K + E + W ED+ E K
Sbjct: 666 REEAMNRLEGLLYDLAVRLEDGEEYAEYATEEEKKAILEEVAVLKLWFEDDVSLETKKEE 725
Query: 524 XXXXXLKM*CSPSSPNFTK 580
K+ + PN K
Sbjct: 726 FDEKRAKLEELTAKPNARK 744
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 34.3 bits (75), Expect = 0.10
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 344 RVESRNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDN 496
R NELES+ + L++ E + D++K K+E+++ WLED+
Sbjct: 693 RAAVENELESFNFECSQYLEETE-FTDYMADEEKTKLEDSVKRIRAWLEDD 742
>U29613-3|AAC47062.2| 483|Caenorhabditis elegans Hypothetical
protein K02A6.3a protein.
Length = 483
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/71 (28%), Positives = 33/71 (46%)
Frame = -1
Query: 268 SVLVIVITIFSLFPVPLSSADTCKIPLASISNVTSICGIPRGAGGIPVKSNLPSKWLSLV 89
S++ + T +SLFP S+ D+ S T IC R A + VK N+ + L+
Sbjct: 256 SIVQVTATPYSLFPPTSSATDSFVFQDEKSSQSTDIC---RNAWDMFVKQNMDRTRVWLI 312
Query: 88 IGRSPSYTWIV 56
+ P + I+
Sbjct: 313 LRGKPKMSLII 323
>Z50872-3|CAA90756.1| 238|Caenorhabditis elegans Hypothetical
protein C05D12.5 protein.
Length = 238
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 425 KVTDDDKAKMEEALDAAIKWLEDNQDAELKNT 520
KV +D +M+E +D +K LE+N + LK +
Sbjct: 94 KVHEDQINEMQEVMDKKVKQLEENYEERLKES 125
>Z50872-2|CAA90755.1| 273|Caenorhabditis elegans Hypothetical
protein C05D12.4 protein.
Length = 273
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/91 (21%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Frame = +2
Query: 419 GAKVTDDDKAKMEEALDAAIKWLEDNQDAELKNTXXXXXXLKM*CSPSSPNFTKARVEYR 598
GAK+ +D+K +++E + +K LED D +++ K + T+ E++
Sbjct: 93 GAKI-EDNKKRIQEEMWKKVKVLEDAFDEKVEENNEVIKNQKESIDKMRISRTETSEEHK 151
Query: 599 ---PRGRRKMTTSRTSCNQTESQPNVISAQM 682
+ +KM + T+C + E+ ++A++
Sbjct: 152 ELVKKINQKMKDTETACRRYEANTTHLTAEL 182
>Z74035-3|CAA98481.1| 808|Caenorhabditis elegans Hypothetical
protein F47G9.4 protein.
Length = 808
Score = 27.9 bits (59), Expect = 8.9
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -1
Query: 277 RCQSVLVIVITIFSLFPVPLSSADTC--KIPLASISNVTSICGIPRGA 140
RC S L++ + I S PL S + +IPLAS VTS G RGA
Sbjct: 629 RCSSALLLSMEISSDSISPLPSLEQLLGRIPLAS--RVTSNIGFSRGA 674
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,166,230
Number of Sequences: 27780
Number of extensions: 313133
Number of successful extensions: 1101
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1095
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -