Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20365
         (744 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ237664-1|CAB40379.2|   81|Anopheles gambiae putative infection...    29   0.15 
AY994093-1|AAX86006.1|   45|Anopheles gambiae metallothionein 1 ...    28   0.35 
AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    28   0.35 
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         27   0.46 
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         27   0.46 
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    27   0.46 
AY341184-1|AAR13748.1|  187|Anopheles gambiae GNBP A1 protein.         25   2.5  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   3.3  
AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           25   3.3  
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     25   3.3  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    24   5.7  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         24   5.7  
AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    24   5.7  
AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    23   7.5  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   10.0 
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   10.0 

>AJ237664-1|CAB40379.2|   81|Anopheles gambiae putative infection
           responsive shortpeptide protein.
          Length = 81

 Score = 29.1 bits (62), Expect = 0.15
 Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 5/74 (6%)
 Frame = -3

Query: 697 IVVAVLACGAEKPDVGVEKTKASCR*CRLPEAKTCIC-----TGTECWGSSLCGRCTECR 533
           I++AVL C A   D  V     +C  C+   A+ C        G  C G +    C +C+
Sbjct: 6   ILLAVLLCTAAVADAMVFAYAPTCARCKSIGARYCGYGYLNRKGVSCDGQTTINSCEDCK 65

Query: 532 WCCGGCTKDRFWAC 491
              G C+      C
Sbjct: 66  RKFGRCSDGFITEC 79


>AY994093-1|AAX86006.1|   45|Anopheles gambiae metallothionein 1
           protein.
          Length = 45

 Score = 27.9 bits (59), Expect = 0.35
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 6/41 (14%)
 Frame = -3

Query: 595 CICTGTECWGSSLCGR----CTECRWCC--GGCTKDRFWAC 491
           C C G +C  +S CG      T+C+  C  GGC K++   C
Sbjct: 3   CKCCGNDCKCTSGCGSGQPCATDCKCACASGGC-KEKSGGC 42


>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 27.9 bits (59), Expect = 0.35
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +3

Query: 576 SVPVQIQVLASGSRHQRQLALVFSTPTSGFSAPQASTATTIVQPTLPTFGQTTAAP 743
           + PV    LA+ +      A V +   +  +AP A+ A+T   P   T    TA+P
Sbjct: 186 AAPVATAALAATAFAATNAASVATAAPAAITAPAANAASTAAAPAAATAHAATASP 241


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 27.5 bits (58), Expect = 0.46
 Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
 Frame = +3

Query: 516 QPPQHHRHSVH--LPHKLLPQH 575
           QPP HH+H  H  LPH    QH
Sbjct: 90  QPPHHHQHPHHHQLPHHPHHQH 111


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 27.5 bits (58), Expect = 0.46
 Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
 Frame = +3

Query: 516 QPPQHHRHSVH--LPHKLLPQH 575
           QPP HH+H  H  LPH    QH
Sbjct: 90  QPPHHHQHPHHHQLPHHPHHQH 111


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 27.5 bits (58), Expect = 0.46
 Identities = 10/21 (47%), Positives = 12/21 (57%), Gaps = 3/21 (14%)
 Frame = -3

Query: 580 TECWGSSLCGRC---TECRWC 527
           T C G + C +C   T CRWC
Sbjct: 34  TTCPGKTTCSQCIQTTNCRWC 54



 Score = 23.8 bits (49), Expect = 5.7
 Identities = 14/45 (31%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
 Frame = -3

Query: 613 LPEAKTCICTGTECW--GSSLCGRCTECRWCCGGCTKDRFWACPA 485
           L + + C C    C   G  LC      R  CG C     W  PA
Sbjct: 582 LIDGRYCECDNFSCDRPGGLLCSGPDHGRCVCGQCECREGWTGPA 626


>AY341184-1|AAR13748.1|  187|Anopheles gambiae GNBP A1 protein.
          Length = 187

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 648 TPTSGFSAPQASTATTIVQPTLPT 719
           T T    AP+++T TT V+PT  T
Sbjct: 115 TRTKATVAPKSTTTTTTVKPTTTT 138


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +3

Query: 528 HHRHSVHLPHKLLPQHS 578
           HH H  H PH    QHS
Sbjct: 184 HHHHHHHHPHHSQQQHS 200


>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +2

Query: 245 PTQKQSNIQLH*SHNKCTSIWQFCIWC*NNK 337
           P Q+ +   L    NK T     C++C NNK
Sbjct: 133 PKQQSTTRPLRKCRNKSTCELDHCVFCFNNK 163


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +2

Query: 245 PTQKQSNIQLH*SHNKCTSIWQFCIWC*NNK 337
           P Q+ +   L    NK T     C++C NNK
Sbjct: 134 PKQQSTTRPLRKCRNKSTCELDHCVFCFNNK 164


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 520 HHSTTGIRYTCHTSCCPSIR 579
           HH TTG+  T H++   S+R
Sbjct: 172 HHRTTGVFVTRHSTTGSSVR 191


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 504 LSLVQPPQHHRHSVHLPH 557
           ++L+   QHH    HLPH
Sbjct: 113 INLLNHHQHHHQHPHLPH 130


>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -3

Query: 583 GTECWGSSLCGRCTE 539
           G E WGS   G CT+
Sbjct: 269 GLELWGSKSIGECTQ 283


>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = -3

Query: 580 TECWGSSLCGRCTECRWCCGGCTKDRFWACPAF*FVACPKAELP 449
           T+C   S  G C +   C     + R   CPA+  V CPK   P
Sbjct: 84  TQC--DSNRGYCVKGDACSVRTFRLRSNRCPAYEEVCCPKNAFP 125


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +3

Query: 540  SVHLPHKLLPQHSVP 584
            S ++P+ L+ QHS+P
Sbjct: 1855 SCYIPYNLVTQHSIP 1869


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 19/76 (25%), Positives = 30/76 (39%), Gaps = 3/76 (3%)
 Frame = -3

Query: 676 CGAEKPDVGVEKTKASCR*C-RLPEAKTCI--CTGTECWGSSLCGRCTECRWCCGGCTKD 506
           C  E  D      + +C  C  + + + C+  C  T+    ++ G C  C   C GC   
Sbjct: 522 CHQECKDFCYGPNEDNCGSCMNVKDGRFCVAECPTTK---HAMNGTCINCHKTCVGCRGP 578

Query: 505 RFWACPAF*FVACPKA 458
           R    P    ++C KA
Sbjct: 579 RDTIAPDG-CISCDKA 593


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 705,261
Number of Sequences: 2352
Number of extensions: 13415
Number of successful extensions: 72
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)