Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20365
(744 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC069297-1|AAH69297.1| 105|Homo sapiens keratin associated prot... 33 1.4
BC069078-1|AAH69078.1| 105|Homo sapiens keratin associated prot... 33 1.4
AY360461-1|AAQ62965.1| 187|Homo sapiens UHS KERB-like protein p... 33 1.4
AJ406952-1|CAC27591.1| 105|Homo sapiens keratin associated prot... 33 1.4
AJ006692-1|CAA07188.1| 194|Homo sapiens ultra high sulfer kerat... 33 1.4
AB126077-1|BAD20204.1| 187|Homo sapiens keratin associated prot... 33 1.4
BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongatio... 31 3.3
AL096857-1|CAB51071.1| 2701|Homo sapiens hypothetical protein pr... 31 3.3
AF488829-1|AAO49478.1| 2701|Homo sapiens HBxAg transactivated pr... 31 3.3
AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription ... 31 3.3
AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongatio... 31 3.3
AB029019-1|BAA83048.2| 1919|Homo sapiens KIAA1096 protein protein. 31 3.3
BC029120-1|AAH29120.1| 603|Homo sapiens chromosome 12 open read... 31 4.4
AL670729-3|CAH71673.1| 6620|Homo sapiens obscurin, cytoskeletal ... 31 5.8
AL359510-13|CAI15072.1| 6620|Homo sapiens obscurin, cytoskeletal... 31 5.8
AL353593-3|CAI19285.1| 6620|Homo sapiens obscurin, cytoskeletal ... 31 5.8
AJ314903-1|CAC85750.1| 542|Homo sapiens obscurin protein. 31 5.8
AJ002535-1|CAC44768.1| 6620|Homo sapiens obscurin protein. 31 5.8
>BC069297-1|AAH69297.1| 105|Homo sapiens keratin associated protein
17-1 protein.
Length = 105
Score = 32.7 bits (71), Expect = 1.4
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -3
Query: 589 CTGTECWGSSLCGRCTECRWCCGGC 515
C G+ C GS CG C C C GGC
Sbjct: 52 CCGSSCCGSG-CGGCGGCGGCGGGC 75
>BC069078-1|AAH69078.1| 105|Homo sapiens keratin associated protein
17-1 protein.
Length = 105
Score = 32.7 bits (71), Expect = 1.4
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -3
Query: 589 CTGTECWGSSLCGRCTECRWCCGGC 515
C G+ C GS CG C C C GGC
Sbjct: 52 CCGSSCCGSG-CGGCGGCGGCGGGC 75
>AY360461-1|AAQ62965.1| 187|Homo sapiens UHS KERB-like protein
protein.
Length = 187
Score = 32.7 bits (71), Expect = 1.4
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 7/63 (11%)
Frame = -3
Query: 679 ACGAEKPDVG-VEKTKASCR*CRLPEA---KTCICT---GTECWGSSLCGRCTECRWCCG 521
+CG K D G +K C C + K C C+ G+ C SS C C CC
Sbjct: 62 SCGGSKGDCGSCGGSKGGCGSCGCSQCSCCKPCCCSSGCGSSCCQSSCCKPCCSQSSCCK 121
Query: 520 GCT 512
C+
Sbjct: 122 PCS 124
>AJ406952-1|CAC27591.1| 105|Homo sapiens keratin associated protein
16.1 protein.
Length = 105
Score = 32.7 bits (71), Expect = 1.4
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -3
Query: 589 CTGTECWGSSLCGRCTECRWCCGGC 515
C G+ C GS CG C C C GGC
Sbjct: 52 CCGSSCCGSG-CGGCGGCGGCGGGC 75
>AJ006692-1|CAA07188.1| 194|Homo sapiens ultra high sulfer keratin
protein.
Length = 194
Score = 32.7 bits (71), Expect = 1.4
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 7/63 (11%)
Frame = -3
Query: 679 ACGAEKPDVG-VEKTKASCR*CRLPEA---KTCICT---GTECWGSSLCGRCTECRWCCG 521
+CG K D G +K C C + K C C+ G+ C SS C C CC
Sbjct: 69 SCGGSKGDCGSCGGSKGGCGSCGCSQCSCYKPCCCSSGCGSSCCQSSCCKPCCSQSSCCK 128
Query: 520 GCT 512
C+
Sbjct: 129 PCS 131
>AB126077-1|BAD20204.1| 187|Homo sapiens keratin associated protein
protein.
Length = 187
Score = 32.7 bits (71), Expect = 1.4
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 7/63 (11%)
Frame = -3
Query: 679 ACGAEKPDVG-VEKTKASCR*CRLPEA---KTCICT---GTECWGSSLCGRCTECRWCCG 521
+CG K D G +K C C + K C C+ G+ C SS C C CC
Sbjct: 62 SCGGSKGDCGSCGGSKGGCGSCGCSQCSCYKPCCCSSGCGSSCCQSSCCKPCCSQSSCCK 121
Query: 520 GCT 512
C+
Sbjct: 122 PCS 124
>BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongation
regulator 1 protein.
Length = 1077
Score = 31.5 bits (68), Expect = 3.3
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = +3
Query: 570 QHSVPVQIQVLASGSRHQRQLALVFSTPTSGFSAPQASTATTIVQPTLPTFGQTTA 737
Q Q QV A + A+ STPT+ AP ST+T+ P+ T TTA
Sbjct: 234 QAQAQAQAQVQAQVQAQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSSTTSTTTTA 289
>AL096857-1|CAB51071.1| 2701|Homo sapiens hypothetical protein
protein.
Length = 2701
Score = 31.5 bits (68), Expect = 3.3
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = +3
Query: 540 SVHLPHKLLPQHSVPVQIQVLASGSRHQRQLALVFSTPTSGFSAPQASTATTIVQPTLPT 719
S P +L S P + +LAS S AL ++ + A + A I PT+P
Sbjct: 1836 SAPAPTPILASVSTPASVTILASASIPILASALASTSAPTPAPAASSPAAPVITAPTIPA 1895
Query: 720 FGQTTAAP 743
T + P
Sbjct: 1896 SAPTASVP 1903
>AF488829-1|AAO49478.1| 2701|Homo sapiens HBxAg transactivated protein
2 protein.
Length = 2701
Score = 31.5 bits (68), Expect = 3.3
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = +3
Query: 540 SVHLPHKLLPQHSVPVQIQVLASGSRHQRQLALVFSTPTSGFSAPQASTATTIVQPTLPT 719
S P +L S P + +LAS S AL ++ + A + A I PT+P
Sbjct: 1836 SAPAPTPILASVSTPASVTILASASIPILASALASTSAPTPAPAASSPAAPVITAPTIPA 1895
Query: 720 FGQTTAAP 743
T + P
Sbjct: 1896 SAPTASVP 1903
>AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription
factor CA150 protein.
Length = 1098
Score = 31.5 bits (68), Expect = 3.3
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = +3
Query: 570 QHSVPVQIQVLASGSRHQRQLALVFSTPTSGFSAPQASTATTIVQPTLPTFGQTTA 737
Q Q QV A + A+ STPT+ AP ST+T+ P+ T TTA
Sbjct: 234 QAQAQAQAQVQAQVQAQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSSTTSTTTTA 289
>AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongation
regulator 1 variant protein.
Length = 1081
Score = 31.5 bits (68), Expect = 3.3
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = +3
Query: 570 QHSVPVQIQVLASGSRHQRQLALVFSTPTSGFSAPQASTATTIVQPTLPTFGQTTA 737
Q Q QV A + A+ STPT+ AP ST+T+ P+ T TTA
Sbjct: 238 QAQAQAQAQVQAQVQAQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSSTTSTTTTA 293
>AB029019-1|BAA83048.2| 1919|Homo sapiens KIAA1096 protein protein.
Length = 1919
Score = 31.5 bits (68), Expect = 3.3
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = +3
Query: 540 SVHLPHKLLPQHSVPVQIQVLASGSRHQRQLALVFSTPTSGFSAPQASTATTIVQPTLPT 719
S P +L S P + +LAS S AL ++ + A + A I PT+P
Sbjct: 859 SAPAPTPILASVSTPASVTILASASIPILASALASTSAPTPAPAASSPAAPVITAPTIPA 918
Query: 720 FGQTTAAP 743
T + P
Sbjct: 919 SAPTASVP 926
>BC029120-1|AAH29120.1| 603|Homo sapiens chromosome 12 open reading
frame 26 protein.
Length = 603
Score = 31.1 bits (67), Expect = 4.4
Identities = 19/44 (43%), Positives = 21/44 (47%)
Frame = -3
Query: 577 ECWGSSLCGRCTECRWCCGGCTKDRFWACPAF*FVACPKAELPT 446
E WG +C E RWCCG R AC A VA + LPT
Sbjct: 431 EKWGFPMCHYLKEERWCCG--RNARMSACLALERVAAGQG-LPT 471
>AL670729-3|CAH71673.1| 6620|Homo sapiens obscurin, cytoskeletal
calmodulin and titin-interacting RhoGEF protein.
Length = 6620
Score = 30.7 bits (66), Expect = 5.8
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = -3
Query: 688 AVLAC--GAEKPDVGVEKTKASCR*CRLPEAKTCICTGTECWGSSLCGRCTECRWCCG 521
A+ +C GAE D V+ + + + CRL E GT L C E W CG
Sbjct: 1787 AIYSCRVGAEGQDFPVQVEEVAAKFCRLLEPVCGELGGTVTLACELSPACAEVVWRCG 1844
>AL359510-13|CAI15072.1| 6620|Homo sapiens obscurin, cytoskeletal
calmodulin and titin-interacting RhoGEF protein.
Length = 6620
Score = 30.7 bits (66), Expect = 5.8
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = -3
Query: 688 AVLAC--GAEKPDVGVEKTKASCR*CRLPEAKTCICTGTECWGSSLCGRCTECRWCCG 521
A+ +C GAE D V+ + + + CRL E GT L C E W CG
Sbjct: 1787 AIYSCRVGAEGQDFPVQVEEVAAKFCRLLEPVCGELGGTVTLACELSPACAEVVWRCG 1844
>AL353593-3|CAI19285.1| 6620|Homo sapiens obscurin, cytoskeletal
calmodulin and titin-interacting RhoGEF protein.
Length = 6620
Score = 30.7 bits (66), Expect = 5.8
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = -3
Query: 688 AVLAC--GAEKPDVGVEKTKASCR*CRLPEAKTCICTGTECWGSSLCGRCTECRWCCG 521
A+ +C GAE D V+ + + + CRL E GT L C E W CG
Sbjct: 1787 AIYSCRVGAEGQDFPVQVEEVAAKFCRLLEPVCGELGGTVTLACELSPACAEVVWRCG 1844
>AJ314903-1|CAC85750.1| 542|Homo sapiens obscurin protein.
Length = 542
Score = 30.7 bits (66), Expect = 5.8
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = -3
Query: 688 AVLAC--GAEKPDVGVEKTKASCR*CRLPEAKTCICTGTECWGSSLCGRCTECRWCCG 521
A+ +C GAE D V+ + + + CRL E GT L C E W CG
Sbjct: 256 AIYSCRVGAEGQDFPVQVEEVAAKFCRLLEPVCGELGGTVTLACELSPACAEVVWRCG 313
>AJ002535-1|CAC44768.1| 6620|Homo sapiens obscurin protein.
Length = 6620
Score = 30.7 bits (66), Expect = 5.8
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = -3
Query: 688 AVLAC--GAEKPDVGVEKTKASCR*CRLPEAKTCICTGTECWGSSLCGRCTECRWCCG 521
A+ +C GAE D V+ + + + CRL E GT L C E W CG
Sbjct: 1787 AIYSCRVGAEGQDFPVQVEEVAAKFCRLLEPVCGELGGTVTLACELSPACAEVVWRCG 1844
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,024,451
Number of Sequences: 237096
Number of extensions: 1892064
Number of successful extensions: 5386
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5362
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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