Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20365
(744 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003148-5|AAB54209.3| 792|Caenorhabditis elegans Hypothetical ... 32 0.49
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 31 1.1
AC024838-4|AAF60819.1| 99|Caenorhabditis elegans Hypothetical ... 31 1.1
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 30 2.0
U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical pr... 30 2.0
U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical pr... 30 2.0
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr... 30 2.0
U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore co... 29 2.6
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 29 2.6
AL032627-17|CAA21550.1| 103|Caenorhabditis elegans Hypothetical... 29 2.6
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z34801-2|CAD82919.1| 884|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z34801-1|CAA84330.1| 860|Caenorhabditis elegans Hypothetical pr... 29 3.5
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 29 3.5
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 29 4.6
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 29 4.6
AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical ... 29 4.6
X53244-1|CAA37334.1| 75|Caenorhabditis elegans metallothionein... 28 6.1
U64853-6|AAB04979.1| 75|Caenorhabditis elegans Metallothionein... 28 6.1
M92909-1|AAA28110.1| 75|Caenorhabditis elegans metallothionein... 28 6.1
D17364-1|BAA04180.1| 75|Caenorhabditis elegans metallothionein... 28 6.1
Z81097-5|CAB03168.1| 243|Caenorhabditis elegans Hypothetical pr... 28 8.0
>AF003148-5|AAB54209.3| 792|Caenorhabditis elegans Hypothetical
protein F32B5.7 protein.
Length = 792
Score = 31.9 bits (69), Expect = 0.49
Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
Frame = -3
Query: 589 CTGTECWGSSLCGRCTECRWC--CGGC 515
C G C CG C C C CGGC
Sbjct: 759 CDGAACGACGACGACGACGGCGGCGGC 785
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/77 (33%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Frame = -3
Query: 742 GAAVV*PNVGRVGCTIVVAVLACGAEKPDVGVEKTKASCR*CRLPEAKTCICTGTECWGS 563
G++ V N G GC CG G + C C P+ C CT C +
Sbjct: 43 GSSRVKRNGGCCGCC------GCGGGGGGCGCCCCRPRCCCCCRPK---CCCT---CCRT 90
Query: 562 SLCGRC-TECRWCCGGC 515
C RC T CR CC GC
Sbjct: 91 CCCTRCCTCCRPCCCGC 107
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/77 (33%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Frame = -3
Query: 742 GAAVV*PNVGRVGCTIVVAVLACGAEKPDVGVEKTKASCR*CRLPEAKTCICTGTECWGS 563
G++ V N G GC CG G + C C P+ C CT C +
Sbjct: 46 GSSRVKRNGGCCGCC------GCGGGGGGCGCCCCRPRCCCCCRPK---CCCT---CCRT 93
Query: 562 SLCGRC-TECRWCCGGC 515
C RC T CR CC GC
Sbjct: 94 CCCTRCCTCCRPCCCGC 110
>AC024838-4|AAF60819.1| 99|Caenorhabditis elegans Hypothetical
protein Y59E9AL.5 protein.
Length = 99
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Frame = -3
Query: 601 KTCI---CTGTECWGSSLCGRCTECRWCCGGCT 512
K C+ CT C +S C RC+ C C CT
Sbjct: 66 KVCVQDDCTTCSCTSASRCSRCSPCCSGCCSCT 98
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = -3
Query: 676 CGAEKPDVGVEKTKASCR*CRLPEAKTCICTGTECWGSSLCGRC-TECRWCCGGC 515
CG G + C C P+ C CT C + C RC T CR CC GC
Sbjct: 57 CGGGGGGCGCCCCRPRCCCCCRPK---CCCT---CCRTCCCTRCCTCCRPCCCGC 105
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical
protein T01D3.3b protein.
Length = 1011
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = -3
Query: 619 CRLPEAKTCICTGTECWGSSLCGRCTECRWCCGGCTKDRFWAC 491
C LP T I T T C+ S C R ++C C G T + AC
Sbjct: 228 CPLP-LNTSITTLTRCFCDSECERGSKC--CPGSITNSNYHAC 267
>U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical
protein C37C3.6c protein.
Length = 1487
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 610 PEAKTCICTGTECWGSSLCGRCTECRWCCGGCTKDRFWAC 491
PE KT +C G+ +EC CGG ++DR C
Sbjct: 633 PEGKTNCTNEEKCTGTWYTSSWSECTAECGGGSQDRVAVC 672
>U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical
protein C37C3.6a protein.
Length = 1558
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 610 PEAKTCICTGTECWGSSLCGRCTECRWCCGGCTKDRFWAC 491
PE KT +C G+ +EC CGG ++DR C
Sbjct: 633 PEGKTNCTNEEKCTGTWYTSSWSECTAECGGGSQDRVAVC 672
>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical
protein C37C3.6b protein.
Length = 2167
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 610 PEAKTCICTGTECWGSSLCGRCTECRWCCGGCTKDRFWAC 491
PE KT +C G+ +EC CGG ++DR C
Sbjct: 633 PEGKTNCTNEEKCTGTWYTSSWSECTAECGGGSQDRVAVC 672
>U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore
complex protein protein11 protein.
Length = 805
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +3
Query: 645 STPTSGFSAPQASTATTIVQPTLPTFGQTTAAP 743
+ PT G STATT PT FG +TAAP
Sbjct: 136 AAPTGGLFGSSTSTATTA--PTGGLFGSSTAAP 166
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -3
Query: 628 CR*CRLPEAKTCICTGTECWGSSLCGRC-TECRWCCGGC 515
C CR P+ C C + C RC T CR CC GC
Sbjct: 85 CCCCR-PKCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGC 122
>AL032627-17|CAA21550.1| 103|Caenorhabditis elegans Hypothetical
protein Y41C4A.13 protein.
Length = 103
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 3/25 (12%)
Frame = -2
Query: 323 TKCKTAK---YWCTCCGTSEAECCF 258
TKC T+ YW CCG ECCF
Sbjct: 47 TKCGTSSIFHYW-KCCGELNKECCF 70
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = -3
Query: 628 CR*CRLPEAKTCICTGTECWGSSLCGRC-TECRWCCGGC 515
C CR P C C + C RC T CR CC GC
Sbjct: 86 CCCCR-PRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGC 123
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = -3
Query: 628 CR*CRLPEAKTCICTGTECWGSSLCGRC-TECRWCCGGC 515
C CR P C C + C RC T CR CC GC
Sbjct: 84 CCCCR-PRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGC 121
>Z34801-2|CAD82919.1| 884|Caenorhabditis elegans Hypothetical
protein F59A2.1b protein.
Length = 884
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 645 STPTSGFSAPQASTATTIVQPTLPTFGQTTAA 740
+ P SG AP+ S ++ P PTF T A
Sbjct: 169 TVPASGVIAPKTSPPEVVIPPAKPTFSTPTPA 200
>Z34801-1|CAA84330.1| 860|Caenorhabditis elegans Hypothetical
protein F59A2.1a protein.
Length = 860
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 645 STPTSGFSAPQASTATTIVQPTLPTFGQTTAA 740
+ P SG AP+ S ++ P PTF T A
Sbjct: 169 TVPASGVIAPKTSPPEVVIPPAKPTFSTPTPA 200
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = -3
Query: 628 CR*CRLPEAKTCICTGTECWGSSLCGRC-TECRWCCGGC 515
C CR P C C + C RC T CR CC GC
Sbjct: 85 CCCCR-PRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGC 122
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = -3
Query: 628 CR*CRLPEAKTCICTGTECWGSSLCGRC-TECRWCCGGC 515
C CR P C C + C RC T CR CC GC
Sbjct: 86 CCCCR-PRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGC 123
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein
F53B7.5b protein.
Length = 2892
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 630 LALVFSTPTSGFSAPQASTATTIVQPTLPTFGQTTAAP 743
++ + ST ++G +AP ++ TT+ T P Q AP
Sbjct: 1490 VSCLISTASNGVTAPPTTSTTTVKDDTAPACSQCGRAP 1527
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
F53B7.5a protein.
Length = 3095
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 630 LALVFSTPTSGFSAPQASTATTIVQPTLPTFGQTTAAP 743
++ + ST ++G +AP ++ TT+ T P Q AP
Sbjct: 1490 VSCLISTASNGVTAPPTTSTTTVKDDTAPACSQCGRAP 1527
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 630 LALVFSTPTSGFSAPQASTATTIVQPTLPTFGQTTAAP 743
++ + ST ++G +AP ++ TT+ T P Q AP
Sbjct: 1490 VSCLISTASNGVTAPPTTSTTTVKDDTAPACSQCGRAP 1527
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 630 LALVFSTPTSGFSAPQASTATTIVQPTLPTFGQTTAAP 743
++ + ST ++G +AP ++ TT+ T P Q AP
Sbjct: 1490 VSCLISTASNGVTAPPTTSTTTVKDDTAPACSQCGRAP 1527
>AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical
protein Y39B6A.6 protein.
Length = 321
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 513 VQPPQHHRHSVHLPHKLLPQHSVPVQIQ 596
V+PP H RHS L L H +P Q+Q
Sbjct: 282 VEPP-HRRHSHRLTRDTLRDHDLPFQLQ 308
>X53244-1|CAA37334.1| 75|Caenorhabditis elegans metallothionein-I
protein.
Length = 75
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/44 (27%), Positives = 18/44 (40%)
Frame = -3
Query: 637 KASCR*CRLPEAKTCICTGTECWGSSLCGRCTECRWCCGGCTKD 506
K C+ + C C+G +C C +E + C GC D
Sbjct: 4 KCDCKNKQCKCGDKCECSGDKCCEKYCCEEASEKKCCPAGCKGD 47
>U64853-6|AAB04979.1| 75|Caenorhabditis elegans Metallothionein
protein 1 protein.
Length = 75
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/44 (27%), Positives = 18/44 (40%)
Frame = -3
Query: 637 KASCR*CRLPEAKTCICTGTECWGSSLCGRCTECRWCCGGCTKD 506
K C+ + C C+G +C C +E + C GC D
Sbjct: 4 KCDCKNKQCKCGDKCECSGDKCCEKYCCEEASEKKCCPAGCKGD 47
>M92909-1|AAA28110.1| 75|Caenorhabditis elegans metallothionein I
protein.
Length = 75
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/44 (27%), Positives = 18/44 (40%)
Frame = -3
Query: 637 KASCR*CRLPEAKTCICTGTECWGSSLCGRCTECRWCCGGCTKD 506
K C+ + C C+G +C C +E + C GC D
Sbjct: 4 KCDCKNKQCKCGDKCECSGDKCCEKYCCEEASEKKCCPAGCKGD 47
>D17364-1|BAA04180.1| 75|Caenorhabditis elegans metallothionein-I
protein.
Length = 75
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/44 (27%), Positives = 18/44 (40%)
Frame = -3
Query: 637 KASCR*CRLPEAKTCICTGTECWGSSLCGRCTECRWCCGGCTKD 506
K C+ + C C+G +C C +E + C GC D
Sbjct: 4 KCDCKNKQCKCGDKCECSGDKCCEKYCCEEASEKKCCPAGCKGD 47
>Z81097-5|CAB03168.1| 243|Caenorhabditis elegans Hypothetical
protein K07A1.7 protein.
Length = 243
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = -3
Query: 583 GTECWGSSLCGRCTECRWCCGGCTKDRFWACPAF 482
G + LC RC W C C KD ++ +F
Sbjct: 143 GRRFYLQQLCARCLWSDWSCKNCGKDEWFDGKSF 176
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,158,632
Number of Sequences: 27780
Number of extensions: 299329
Number of successful extensions: 1112
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1099
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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