Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20363
         (556 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M73837-1|AAA59870.1|  246|Homo sapiens modulator recognition fac...    30   6.3  
AL671972-2|CAH72686.1| 1188|Homo sapiens modulator recognition f...    30   6.3  
AL671972-1|CAH72685.1|  945|Homo sapiens modulator recognition f...    30   6.3  
AJ277892-6|CAD12460.1|  454|Homo sapiens Titin fetal Isoform pro...    30   6.3  
AF321609-1|AAT09768.1|  834|Homo sapiens titin protein.                30   6.3  
X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein.          29   8.3  
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.                29   8.3  

>M73837-1|AAA59870.1|  246|Homo sapiens modulator recognition factor
           2 protein.
          Length = 246

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +2

Query: 338 KQESLAQAELSNPKLTQTDNPKAEVPKTEAPKTEALKPE 454
           KQE+ +Q   +  K++ T   K E+PK++  K  A KP+
Sbjct: 123 KQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQ 161


>AL671972-2|CAH72686.1| 1188|Homo sapiens modulator recognition
           factor 2 (MRF2) protein.
          Length = 1188

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +2

Query: 338 KQESLAQAELSNPKLTQTDNPKAEVPKTEAPKTEALKPE 454
           KQE+ +Q   +  K++ T   K E+PK++  K  A KP+
Sbjct: 424 KQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQ 462


>AL671972-1|CAH72685.1|  945|Homo sapiens modulator recognition
           factor 2 (MRF2) protein.
          Length = 945

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +2

Query: 338 KQESLAQAELSNPKLTQTDNPKAEVPKTEAPKTEALKPE 454
           KQE+ +Q   +  K++ T   K E+PK++  K  A KP+
Sbjct: 181 KQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQ 219


>AJ277892-6|CAD12460.1|  454|Homo sapiens Titin fetal Isoform
           protein.
          Length = 454

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 374 PKLTQTDNPKAEVPKTEAPKTEALKPEAPVPE 469
           P++ +   PK  VP+ + P   A KPEAP P+
Sbjct: 340 PEVPEVLPPKEVVPEKKVPVPPAKKPEAPPPK 371



 Score = 29.5 bits (63), Expect = 8.3
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 398 PKAEVPKTEAPKTEALKPEAPVPE 469
           PKA VP+ + P+    KPE+P PE
Sbjct: 318 PKAAVPEKKVPEAIPPKPESPPPE 341


>AF321609-1|AAT09768.1|  834|Homo sapiens titin protein.
          Length = 834

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 374 PKLTQTDNPKAEVPKTEAPKTEALKPEAPVPE 469
           P++ +   PK  VP+ + P   A KPEAP P+
Sbjct: 506 PEVPEVLPPKEVVPEKKVPVPPAKKPEAPPPK 537



 Score = 29.9 bits (64), Expect = 6.3
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 374 PKLTQTDNPKAEVPKTEAPKTEALKPEAPVPE 469
           P++ +   PK  VP+ + P   A KPEAP P+
Sbjct: 703 PEVPEVLPPKEVVPEKKVPVPPAKKPEAPPPK 734



 Score = 29.5 bits (63), Expect = 8.3
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 398 PKAEVPKTEAPKTEALKPEAPVPE 469
           PKA VP+ + P+    KPE+P PE
Sbjct: 681 PKAAVPEKKVPEAIPPKPESPPPE 704


>X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein.
          Length = 7962

 Score = 29.5 bits (63), Expect = 8.3
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 398  PKAEVPKTEAPKTEALKPEAPVPE 469
            PKA VP+ + P+    KPE+P PE
Sbjct: 7222 PKAAVPEKKVPEAIPPKPESPPPE 7245


>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
          Length = 30000

 Score = 29.5 bits (63), Expect = 8.3
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 398   PKAEVPKTEAPKTEALKPEAPVPE 469
             PKA VP+ + P+    KPE+P PE
Sbjct: 11484 PKAAVPEKKVPEAIPPKPESPPPE 11507


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,816,118
Number of Sequences: 237096
Number of extensions: 870853
Number of successful extensions: 2459
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2444
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5533942988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)