Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20363
         (556 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z84574-5|CAB06541.1|  846|Caenorhabditis elegans Hypothetical pr...    34   0.079
L15313-1|AAA28202.1|  305|Caenorhabditis elegans Hypothetical pr...    31   0.56 
U43283-7|AAC69018.1|  537|Caenorhabditis elegans Hypothetical pr...    31   0.74 
AC006833-6|AAF60950.1|  491|Caenorhabditis elegans Hypothetical ...    30   1.3  
Z80215-7|CAB02274.1|  674|Caenorhabditis elegans Hypothetical pr...    28   3.9  
Z35663-4|CAA84724.1|  307|Caenorhabditis elegans Hypothetical pr...    28   3.9  
AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical ...    28   5.2  
Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical pr...    27   9.1  
AL110500-9|CAE54920.1|  586|Caenorhabditis elegans Hypothetical ...    27   9.1  
AL110500-8|CAB60430.1|  551|Caenorhabditis elegans Hypothetical ...    27   9.1  

>Z84574-5|CAB06541.1|  846|Caenorhabditis elegans Hypothetical
           protein F33E2.6 protein.
          Length = 846

 Score = 33.9 bits (74), Expect = 0.079
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +2

Query: 362 ELSNPKLTQTDNPKAEVPKTEAPKTEALKPEAPVPE 469
           E    ++  T  P+ E PKTEAP+T   K EAP+ E
Sbjct: 649 EAPRTEVPMTVPPRTEPPKTEAPRTVPPKTEAPMTE 684



 Score = 33.5 bits (73), Expect = 0.10
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = +2

Query: 386 QTDNPKAEVPKTEAPKTEALKPEAPV 463
           +T+ P+ E PKTEAP+T   K EAP+
Sbjct: 572 RTEPPRTEPPKTEAPRTVRPKTEAPM 597



 Score = 32.3 bits (70), Expect = 0.24
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +2

Query: 332 TEKQESLA-QAELSNPKLTQTDNPKAEVPKTEAPKTEALKPEAP 460
           TE  E++  + E    +  +T  P+ E P+TE P+TE  K EAP
Sbjct: 543 TEAPETVTTRTEPPRTEPPRTIPPRTEAPRTEPPRTEPPKTEAP 586



 Score = 32.3 bits (70), Expect = 0.24
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +2

Query: 386 QTDNPKAEVPKTEAPKTEALKPEAPVPEA 472
           +T+ P+ E P+TE PKTEA +   P  EA
Sbjct: 567 RTEAPRTEPPRTEPPKTEAPRTVRPKTEA 595



 Score = 31.9 bits (69), Expect = 0.32
 Identities = 15/28 (53%), Positives = 17/28 (60%)
 Frame = +2

Query: 386 QTDNPKAEVPKTEAPKTEALKPEAPVPE 469
           +TD P+ E PKTE P TE  K E P  E
Sbjct: 369 KTDPPRTEPPKTEPPTTEPPKIEPPRTE 396



 Score = 31.5 bits (68), Expect = 0.42
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 386 QTDNPKAEVPKTEAPKTEALKPEAPV 463
           +T+ PK E P+T  PKTEA   E P+
Sbjct: 662 RTEPPKTEAPRTVPPKTEAPMTEVPM 687



 Score = 31.1 bits (67), Expect = 0.56
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +2

Query: 386 QTDNPKAEVPKTEAPKTEALKPEAPVPE 469
           +T+ P  E PKTE PKT   K E P  E
Sbjct: 399 KTEPPPTEPPKTEPPKTTPPKTEPPTTE 426



 Score = 30.7 bits (66), Expect = 0.74
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +2

Query: 389 TDNPKAEVPKTEAPKTEALKPEAPVPE 469
           T+ PK E P+TE PKTE    E P  E
Sbjct: 385 TEPPKIEPPRTEPPKTEPPPTEPPKTE 411



 Score = 30.7 bits (66), Expect = 0.74
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +2

Query: 383 TQTDNPKAEVPKTEAPKTEALKPEAPVPE 469
           T+T+ P+ E P+T  P+TEA + E P  E
Sbjct: 551 TRTEPPRTEPPRTIPPRTEAPRTEPPRTE 579



 Score = 30.7 bits (66), Expect = 0.74
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +2

Query: 386 QTDNPKAEVPKTEAPKTEALKPEAPVPEA 472
           +T+ P+   P+TEAP+TE  + E P  EA
Sbjct: 557 RTEPPRTIPPRTEAPRTEPPRTEPPKTEA 585



 Score = 30.7 bits (66), Expect = 0.74
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +2

Query: 389 TDNPKAEVPKTEAPKTEALKPEAP 460
           T+ P+ EVP T  P+TE  K EAP
Sbjct: 648 TEAPRTEVPMTVPPRTEPPKTEAP 671



 Score = 30.3 bits (65), Expect = 0.97
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +2

Query: 386 QTDNPKAEVPKTEAPKTEALKPEAPVPE 469
           +T+ PK E P TE PKTE  K   P  E
Sbjct: 394 RTEPPKTEPPPTEPPKTEPPKTTPPKTE 421



 Score = 29.9 bits (64), Expect = 1.3
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
 Frame = +2

Query: 356 QAELSNPKLTQ---TDNPKAEVPKTEAPKTEALKPEAPVPE 469
           +A ++ P  T+   T+ P+ EVP TE PKTE  +   P  E
Sbjct: 594 EAPMTVPPRTEPPMTEAPRTEVPMTEPPKTEPPRTAPPRTE 634



 Score = 29.5 bits (63), Expect = 1.7
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +2

Query: 371 NPKLTQTDNPKAEVPKTEAPKTEALKPEAPVPEA 472
           N +  +T+ P    P+TE PKTEA +   P  EA
Sbjct: 647 NTEAPRTEVPMTVPPRTEPPKTEAPRTVPPKTEA 680



 Score = 29.1 bits (62), Expect = 2.2
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +2

Query: 389 TDNPKAEVPKTEAPKTEALKPEAP 460
           T+ PK E PKT  PKTE    E P
Sbjct: 405 TEPPKTEPPKTTPPKTEPPTTEPP 428



 Score = 29.1 bits (62), Expect = 2.2
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +2

Query: 386 QTDNPKAEVPKTEAPKTEALKPEAPVPEA 472
           +T+ P+   PKTEAP T   + E P+ EA
Sbjct: 582 KTEAPRTVRPKTEAPMTVPPRTEPPMTEA 610



 Score = 28.7 bits (61), Expect = 3.0
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +2

Query: 383 TQTDNPKAEVPKTEAPKTEALKPEAP 460
           T T  PK + P+TE PKTE    E P
Sbjct: 363 TTTVPPKTDPPRTEPPKTEPPTTEPP 388



 Score = 28.7 bits (61), Expect = 3.0
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 386 QTDNPKAEVPKTEAPKTEALKPEAPVPE 469
           +T+ P    P+TE P TEA + E P+ E
Sbjct: 592 KTEAPMTVPPRTEPPMTEAPRTEVPMTE 619



 Score = 28.3 bits (60), Expect = 3.9
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 356 QAELSNPKLTQTDNPKAEVPKTEAPKTEALKPEAPV 463
           + E+S     +T  PK E P+TE P T   + E P+
Sbjct: 712 RTEVSMTLPPETVPPKTEAPRTEVPMTGPSRTEVPM 747



 Score = 27.9 bits (59), Expect = 5.2
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
 Frame = +2

Query: 368 SNPKLTQTDNPKAEVPKTEAPKTE---ALKPEAPVPE 469
           S  ++  T+ PK E P+T  P+TE    L PE   P+
Sbjct: 691 SRTEVPMTEPPKTEQPRTAPPRTEVSMTLPPETVPPK 727



 Score = 27.5 bits (58), Expect = 6.9
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +2

Query: 386 QTDNPKAEVPKTEAPKTEALKPEAPVPE 469
           +T  PK E P T  P+TE    EAP  E
Sbjct: 587 RTVRPKTEAPMTVPPRTEPPMTEAPRTE 614



 Score = 27.5 bits (58), Expect = 6.9
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +2

Query: 356 QAELSNPKLTQTDNPKAEVPKTEAPKTEALKPEAPVPEA 472
           + E+S     +T  P  E P+TE P T   + E P  EA
Sbjct: 632 RTEVSMTLPPETVPPNTEAPRTEVPMTVPPRTEPPKTEA 670



 Score = 27.5 bits (58), Expect = 6.9
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 386 QTDNPKAEVPKTEAPKTEALKPEAPVPE 469
           +T  PK E P TE P T   + E P+ E
Sbjct: 672 RTVPPKTEAPMTEVPMTGPSRTEVPMTE 699


>L15313-1|AAA28202.1|  305|Caenorhabditis elegans Hypothetical
           protein ZK353.4 protein.
          Length = 305

 Score = 31.1 bits (67), Expect = 0.56
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = +2

Query: 332 TEKQESLAQAELSNPKLTQTDNPKAEVPKTEAPKTEALKPEAPVPE 469
           T   E++ +     PK T    PK  +PK   PKTE L  + P  E
Sbjct: 110 TTVDETIKEKSEKQPK-TCAQKPKVPIPKASTPKTEKLVSKEPSTE 154



 Score = 29.1 bits (62), Expect = 2.2
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +2

Query: 335 EKQESLAQAELSNPKLTQTDNPKAEVPKTEAPKTEALKPEAPVPEA 472
           +  ES  Q + S   + +T   K+E    + PKT A KP+ P+P+A
Sbjct: 97  QSPESTEQDDFSKTTVDETIKEKSE----KQPKTCAQKPKVPIPKA 138


>U43283-7|AAC69018.1|  537|Caenorhabditis elegans Hypothetical
           protein T25G12.2 protein.
          Length = 537

 Score = 30.7 bits (66), Expect = 0.74
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = +1

Query: 88  HLHKDLYEEIITTL*SWLEEKTKVVRKRHLILRKPLLLKVSLQ 216
           H H D ++EI  ++   L  +T+   +RHL+ ++  L KV ++
Sbjct: 403 HYHHDHHQEIEASIPLSLSRRTRKTARRHLVSKEHFLNKVKIE 445


>AC006833-6|AAF60950.1|  491|Caenorhabditis elegans Hypothetical
           protein ZK616.1 protein.
          Length = 491

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +2

Query: 374 PKLTQTDNPKAEVPKTEAPK-TEALKPEAPVPE 469
           PK  + +  K EVPK E PK  E +K EAP  E
Sbjct: 390 PKKVEEEVKKPEVPKNEEPKMEEPVKEEAPKVE 422


>Z80215-7|CAB02274.1|  674|Caenorhabditis elegans Hypothetical
           protein C36B1.9 protein.
          Length = 674

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 11/44 (25%), Positives = 23/44 (52%)
 Frame = +2

Query: 344 ESLAQAELSNPKLTQTDNPKAEVPKTEAPKTEALKPEAPVPEAC 475
           ++L   EL +  + + D PK E+ K E  + + ++  A   ++C
Sbjct: 20  DTLPDTELPSLNVLEVDEPKEEIKKNEMSRIDIIREAADNVQSC 63


>Z35663-4|CAA84724.1|  307|Caenorhabditis elegans Hypothetical
           protein T04A8.6 protein.
          Length = 307

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +2

Query: 368 SNPKLTQTDNPKAEVPKTEAPKTEALKPEAPV 463
           + PK+ +   PKA  PK   PK    K   PV
Sbjct: 204 TTPKIVKAATPKAATPKAVTPKQATPKVSTPV 235


>AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical
           protein R155.3 protein.
          Length = 1165

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 395 NPKAEVPKTEAPKTEALKPEAPVP 466
           N K EVP  EA K+E +K   P+P
Sbjct: 794 NEKYEVPGREALKSEQMKQRLPIP 817


>Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical
           protein C03D6.4 protein.
          Length = 1390

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = +2

Query: 383 TQTDNPKAEVPKTEAPKTEALKPEAPVP 466
           T    PK  VPK EA KT+  KP    P
Sbjct: 913 TTMTTPKVTVPKEEANKTQDQKPIISTP 940


>AL110500-9|CAE54920.1|  586|Caenorhabditis elegans Hypothetical
           protein Y87G2A.8b protein.
          Length = 586

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = -2

Query: 408 SAFGLSV*VSFGFDNSA*ANDSCFSV 331
           SA GLS+ V  GFDN     D  FSV
Sbjct: 311 SAIGLSIAVHIGFDNYEKLLDGAFSV 336


>AL110500-8|CAB60430.1|  551|Caenorhabditis elegans Hypothetical
           protein Y87G2A.8a protein.
          Length = 551

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = -2

Query: 408 SAFGLSV*VSFGFDNSA*ANDSCFSV 331
           SA GLS+ V  GFDN     D  FSV
Sbjct: 276 SAIGLSIAVHIGFDNYEKLLDGAFSV 301


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,007,857
Number of Sequences: 27780
Number of extensions: 139495
Number of successful extensions: 483
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 465
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)