Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20362
         (778 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   6.3  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    22   6.3  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   6.3  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   6.3  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    21   8.3  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 559 ADSIDSVAEDEEQLADQLKEYLFY 630
           A+SID +  +     D++  YLFY
Sbjct: 101 AESIDDLLSNAVFCRDRVNPYLFY 124


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 4/28 (14%)
 Frame = +3

Query: 21  RRYTE----FEQIHDYLQVTYPHVVIPP 92
           RRY +    FE    Y+Q  Y  +VIPP
Sbjct: 174 RRYMQLTPLFEYSQTYIQHGYLELVIPP 201


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 4/28 (14%)
 Frame = +3

Query: 21  RRYTE----FEQIHDYLQVTYPHVVIPP 92
           RRY +    FE    Y+Q  Y  +VIPP
Sbjct: 174 RRYMQLTPLFEYSQTYIQHGYLELVIPP 201


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 4/28 (14%)
 Frame = +3

Query: 21  RRYTE----FEQIHDYLQVTYPHVVIPP 92
           RRY +    FE    Y+Q  Y  +VIPP
Sbjct: 174 RRYMQLTPLFEYSQTYIQHGYLELVIPP 201


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 11/29 (37%), Positives = 12/29 (41%)
 Frame = +3

Query: 129 SDTTDPEFVERRRAGLENFLLRVASHPRL 215
           S  TDP  V + RAG       V   P L
Sbjct: 99  SAATDPSVVSKFRAGFSECASEVGRFPGL 127


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,518
Number of Sequences: 336
Number of extensions: 4379
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)