Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20362
(778 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45198| Best HMM Match : PX (HMM E-Value=2.3e-10) 74 1e-13
SB_22287| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_41682| Best HMM Match : PX (HMM E-Value=3.9) 44 2e-04
SB_31091| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_1933| Best HMM Match : PI3_PI4_kinase (HMM E-Value=4.06377e-44) 39 0.005
SB_21029| Best HMM Match : PX (HMM E-Value=9.1e-15) 38 0.009
SB_38344| Best HMM Match : PX (HMM E-Value=8.1e-21) 37 0.016
SB_18498| Best HMM Match : PX (HMM E-Value=1.6e-15) 37 0.021
SB_45017| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.15
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.15
SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07) 34 0.15
SB_43841| Best HMM Match : PXA (HMM E-Value=1e-16) 33 0.34
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 33 0.34
SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0) 29 3.2
SB_805| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_47087| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_9811| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_22920| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.7
>SB_45198| Best HMM Match : PX (HMM E-Value=2.3e-10)
Length = 408
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/57 (57%), Positives = 44/57 (77%), Gaps = 2/57 (3%)
Frame = +3
Query: 15 IWRRYTEFEQIHDYLQVTYPHVVIPPLPEKRV-LYAWR-KSDTTDPEFVERRRAGLE 179
+WRRY+EFE + +YL TYP V++PPLPEKR+ L A R +D DP+F+E+RR GLE
Sbjct: 69 LWRRYSEFELLRNYLVATYPAVIVPPLPEKRINLSALRLAADKFDPDFIEKRRTGLE 125
Score = 41.9 bits (94), Expect = 6e-04
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +1
Query: 556 IADSIDSVAEDEE-QLADQLKEYLFYAGALQQLCSNHEALQRNLEQAQDTLNNRLAERTR 732
++ S+D+V ED+E AD LKEY +A L+ + Q +LE+A++ L+ + +R
Sbjct: 203 LSASVDNVLEDDELTFADPLKEYQLFADVLKMVAKKQWLRQYDLEKAEEALSAKNKQRQD 262
Query: 733 AAAGKSGIMSDCLVP 777
K + + VP
Sbjct: 263 LETQKQAVAAATPVP 277
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +2
Query: 293 LQAENKIKSLSVSIRLKKPDPEVESFKNYGKQLETNLGNFLYTRSK---IIEKNY 448
L+ +++++SLS S+ LKKPD E K+Y L T++ + L R + I+ NY
Sbjct: 124 LEVDSRLRSLSASMSLKKPDRRFEDMKHYADNLGTSVASMLKVRQQEKASIKSNY 178
>SB_22287| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/64 (40%), Positives = 38/64 (59%)
Frame = +3
Query: 12 TIWRRYTEFEQIHDYLQVTYPHVVIPPLPEKRVLYAWRKSDTTDPEFVERRRAGLENFLL 191
T+ RRY+EF + L +P+ IPPLP KRVL + D EF++ R+ GLE++L
Sbjct: 68 TVRRRYSEFTWLRKKLAEEFPNASIPPLPGKRVLGRF------DTEFIKNRQQGLEHWLR 121
Query: 192 RVAS 203
+ S
Sbjct: 122 SLLS 125
>SB_41682| Best HMM Match : PX (HMM E-Value=3.9)
Length = 96
Score = 43.6 bits (98), Expect = 2e-04
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +3
Query: 78 VVIPPLPEKRV--LYAWRKSDTT-DPEFVERRRAGLENFLLRVASHPRLCFDDQFINFLQ 248
+V+P LP K + + +R D + EF+E RR GLE F+ RVA HP + FLQ
Sbjct: 1 IVVPALPGKALKRMLPFRGDDGIFEDEFIEDRRQGLEAFINRVAGHPLAQNEKCLHMFLQ 60
Query: 249 EEMVGGKLSP 278
E M+ P
Sbjct: 61 EPMIDKNYVP 70
>SB_31091| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 607
Score = 41.9 bits (94), Expect = 6e-04
Identities = 22/65 (33%), Positives = 37/65 (56%)
Frame = +3
Query: 21 RRYTEFEQIHDYLQVTYPHVVIPPLPEKRVLYAWRKSDTTDPEFVERRRAGLENFLLRVA 200
RR+ F+ +++ L Y + IPPLP+K++ + +FVE+RR LE ++ R+
Sbjct: 199 RRFKHFDWLYNRLVDKYTLIAIPPLPDKQI------TGRFGEDFVEKRREKLEKWVGRLC 252
Query: 201 SHPRL 215
HP L
Sbjct: 253 QHPVL 257
>SB_1933| Best HMM Match : PI3_PI4_kinase (HMM E-Value=4.06377e-44)
Length = 915
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = +3
Query: 15 IWRRYTEFEQIHDYLQVTYPHVVIPPLPEKRVLYAWRKSDTTDPEFVERRRAGLENFLLR 194
++RR+ F ++H L YP + +P LP + +Y R T ERRRA L+ FL
Sbjct: 502 VFRRFGHFIELHAKLSELYPDIALPRLPAR--IYLGRSQIRT---VAERRRAELDTFLRH 556
Query: 195 VASHPR 212
+ P+
Sbjct: 557 LLMMPQ 562
>SB_21029| Best HMM Match : PX (HMM E-Value=9.1e-15)
Length = 1466
Score = 37.9 bits (84), Expect = 0.009
Identities = 25/76 (32%), Positives = 37/76 (48%)
Frame = +3
Query: 21 RRYTEFEQIHDYLQVTYPHVVIPPLPEKRVLYAWRKSDTTDPEFVERRRAGLENFLLRVA 200
+RY EF ++HD L Y H+ LP K+ DP+++E RR LE +L ++
Sbjct: 784 KRYREFRELHDKLVKEY-HIDQSLLPPKKYF------GNLDPDYIETRRLLLEIYLHKLL 836
Query: 201 SHPRLCFDDQFINFLQ 248
DQ NFL+
Sbjct: 837 EKFEDNLPDQLDNFLE 852
>SB_38344| Best HMM Match : PX (HMM E-Value=8.1e-21)
Length = 632
Score = 37.1 bits (82), Expect = 0.016
Identities = 21/64 (32%), Positives = 38/64 (59%)
Frame = +3
Query: 12 TIWRRYTEFEQIHDYLQVTYPHVVIPPLPEKRVLYAWRKSDTTDPEFVERRRAGLENFLL 191
TI+RRY++F+ +H +L+ + PLP +L R D +F+E+RRA L++++
Sbjct: 371 TIYRRYSDFDDLHMHLKNKFG-----PLPNL-LLPGKRTFRNMDKDFLEKRRAALDSYIQ 424
Query: 192 RVAS 203
+ S
Sbjct: 425 TLLS 428
>SB_18498| Best HMM Match : PX (HMM E-Value=1.6e-15)
Length = 402
Score = 36.7 bits (81), Expect = 0.021
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Frame = +3
Query: 3 ARGTIWRRYTEFEQIHDYLQVTYP-HVVIPPLPEKRVLYAWRKSDTTDPEFVERRRAGLE 179
++ + RR++EFE + + L+ + PPLP KR+L + +S F++ R+ L+
Sbjct: 45 SKSCVRRRFSEFEWLRNILEQNGSISLQPPPLPHKRLLGRFNQS------FIKERQQELQ 98
Query: 180 NFLLRVASHPRLCFDDQFINFLQEEMVGGKLSPIVD 287
+FL+RV + + FLQ + + I+D
Sbjct: 99 DFLVRVLAVTSYLSEAALHLFLQTNLSINTIERILD 134
>SB_45017| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 33.9 bits (74), Expect = 0.15
Identities = 13/36 (36%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = +3
Query: 12 TIWRRYTEFEQIHDYLQVTYPHV--VIPPLPEKRVL 113
T+ RR+++F +H+ + Y H+ ++PP PEK V+
Sbjct: 10 TVKRRFSDFLGLHERINAKYLHLGRIVPPAPEKSVI 45
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 33.9 bits (74), Expect = 0.15
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +1
Query: 562 DSIDSVAEDEEQLADQL---KEYLFYAGA-LQQLCSNHEALQRNLEQAQDTLNNRLAERT 729
+ ID A+ E +L + + KE + A ++Q HEALQRNL+ D +++L E+
Sbjct: 1790 EEIDRHADTEARLGELIQAKKEEIAQLSAQVKQWNEKHEALQRNLDD-HDLRHSQLQEQY 1848
Query: 730 RAAAGKSGIMSDCLV 774
+ ++ DCL+
Sbjct: 1849 EFKCNEVEVLQDCLL 1863
>SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07)
Length = 1447
Score = 33.9 bits (74), Expect = 0.15
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +1
Query: 553 SIADSIDSVAEDEEQLADQLKEYLFYAGALQQLCSNHEALQRNLEQAQDTLNNRLAE 723
S+ S+DSV + +Q A+++ E Y ++QL EAL ++ E D L L +
Sbjct: 262 SLKSSLDSVEQLRKQHAEEMIEVENYVSHIRQLSDEREALTQDTEAENDQLKAELQQ 318
>SB_43841| Best HMM Match : PXA (HMM E-Value=1e-16)
Length = 848
Score = 32.7 bits (71), Expect = 0.34
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +3
Query: 15 IWRRYTEFEQIHDYLQVTYPHVVIP-PLPEKRVLYAWRKSDTTDPEFVERRRAGLENFLL 191
+ R++ +F+ +H L+ + P P K+ W KS D EF+ + R LE +L
Sbjct: 649 VTRKFNDFKILHAKLKECSSKLPNELPAPAKK----WYKS--LDDEFLNKSRLALEQYLQ 702
Query: 192 RVASHPRLCFDDQFINFL 245
+ + LC ++ +FL
Sbjct: 703 SLLADETLCLSEELYSFL 720
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 32.7 bits (71), Expect = 0.34
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +1
Query: 592 EQLADQLKEYLFYAGALQQLCSNHEALQRNLEQAQDTLNNRLAERTRAAA 741
++L +L++ L A AL++ NH + NL+ L N+L+E R AA
Sbjct: 655 KRLESELQDALNRASALEEDAKNHNQVVDNLQDEITRLKNKLSEAERQAA 704
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/68 (22%), Positives = 31/68 (45%)
Frame = +1
Query: 508 EEMGDGLQKAGHYFDSIADSIDSVAEDEEQLADQLKEYLFYAGALQQLCSNHEALQRNLE 687
+E+ D K ++ + +++L D K+ ALQ +N LQR+++
Sbjct: 2140 DELVDARHKIATLESQTEEAQQKIEAQQKELLDAYKKIADLEAALQSANNNKSELQRDIK 2199
Query: 688 QAQDTLNN 711
Q+ +N+
Sbjct: 2200 NLQNRINS 2207
>SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 2681
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 459 NCTRTTANCLVNGASSRRDGRRIAEGRTLFRFNSGQY 569
+CT T C+ +S RDG+ I G ++GQY
Sbjct: 2605 DCTATCNRCIPTANNSTRDGKSIPSGLLWRSTDAGQY 2641
>SB_805| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1270
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +1
Query: 529 QKAGHYFDSIADSI-DSVAEDEEQLADQ-LKEYLFYAGALQQLCSNHEALQRNLEQAQDT 702
Q G+ D IA+ + D +L D+ + +Y+ +LC HE + L
Sbjct: 759 QNEGYNADKIAEILRDRHEASRNRLHDRHVTDYVTDKALCNRLCDRHEVSRDRLHDRHKA 818
Query: 703 LNNRLAER 726
L NRL +R
Sbjct: 819 LCNRLCDR 826
>SB_47087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 332
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 367 LQKLWETIRN*FRKLFIYKIQNNRKK 444
L+K WET+ N FRKL + QNN K
Sbjct: 206 LEKWWETVENVFRKL-LATFQNNPDK 230
>SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3212
Score = 29.1 bits (62), Expect = 4.2
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Frame = +2
Query: 263 RETITDSGYLLQAENK---IKSLSVSIRLKKPDPEVESFKNYGKQLETNLGNFL-YTRSK 430
+E +T LL+ K I S + SI K P VE + K +E +LGNFL Y + +
Sbjct: 2010 KEELTRVEALLETYRKSSSITSSTPSILQKSPGITVEEDMSQVKHMEEDLGNFLFYVQEE 2069
Query: 431 I--IEKN 445
+ IE+N
Sbjct: 2070 LAKIERN 2076
>SB_9811| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = -3
Query: 182 IF*ASSTALHKLRVCSVRFAPRVKHPFLW*WRYNYMWICDL*VIM 48
IF +S A+H+ +V F P +KH +++ W +WI + +++
Sbjct: 117 IFTLTSMAIHRRKVILNPFKPEIKHRYVFIW-IVVIWIMAILIVI 160
>SB_22920| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +1
Query: 634 GALQQLCSNHEALQRNLEQAQDTLNNRLAERTRAAAGKSGIMS 762
G LQQL S + L ++E ++ T++N ++E ++ A IMS
Sbjct: 44 GNLQQLQSITDRLVGSMEASRATVDNLMSEINQSLASSRNIMS 86
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,144,545
Number of Sequences: 59808
Number of extensions: 569429
Number of successful extensions: 1379
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1373
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2119930593
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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