Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20361
         (613 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    22   4.7  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   4.7  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   4.7  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    21   6.2  
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    21   8.2  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   8.2  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   8.2  

>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 4/28 (14%)
 Frame = +3

Query: 21  RRYTE----FEQIHDYLQVTYPHVVIPP 92
           RRY +    FE    Y+Q  Y  +VIPP
Sbjct: 174 RRYMQLTPLFEYSQTYIQHGYLELVIPP 201


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 4/28 (14%)
 Frame = +3

Query: 21  RRYTE----FEQIHDYLQVTYPHVVIPP 92
           RRY +    FE    Y+Q  Y  +VIPP
Sbjct: 174 RRYMQLTPLFEYSQTYIQHGYLELVIPP 201


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 4/28 (14%)
 Frame = +3

Query: 21  RRYTE----FEQIHDYLQVTYPHVVIPP 92
           RRY +    FE    Y+Q  Y  +VIPP
Sbjct: 174 RRYMQLTPLFEYSQTYIQHGYLELVIPP 201


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 11/29 (37%), Positives = 12/29 (41%)
 Frame = +3

Query: 129 SDTTDPEFVERRRAGLENFLLRVASHPRL 215
           S  TDP  V + RAG       V   P L
Sbjct: 99  SAATDPSVVSKFRAGFSECASEVGRFPGL 127


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 479 KLFSEWSVIEKRWETDC 529
           +L+    VIE+R E DC
Sbjct: 56  RLYPSVPVIERRLEVDC 72


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -2

Query: 540 SGLLQSVSHLFSMTLHSLNSLP*FAC 463
           S + +S + L  M +  + S+P F C
Sbjct: 197 SAICESAAQLLFMNVQWVRSIPAFTC 222


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -2

Query: 540 SGLLQSVSHLFSMTLHSLNSLP*FAC 463
           S + +S + L  M +  + S+P F C
Sbjct: 197 SAICESAAQLIFMNVQWVRSIPAFTC 222


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,979
Number of Sequences: 336
Number of extensions: 3511
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)