Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20361
         (613 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   3.4  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   7.8  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +2

Query: 281 SGYLLQAENKIKSLSVSIRLKKPDPEVESFKNYG 382
           S Y+LQ E  +K LS     +K  P  +    YG
Sbjct: 617 SDYVLQEEGPLKQLSGKAVCRKCHPRCKKCTGYG 650


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 350 DPEVESFKNYGKQLETNLGNFLYTRSKIIEKN 445
           DP+  S    GK L+  L NF+  R  ++E N
Sbjct: 75  DPDGLSLFRNGKVLKIVLKNFMCHRHMVVEFN 106


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 686,672
Number of Sequences: 2352
Number of extensions: 14579
Number of successful extensions: 40
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59711994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)