Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20361
         (613 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119129-1|AAM50989.1|  458|Drosophila melanogaster RE32163p pro...    54   2e-07
AE014134-602|AAF51109.1|  458|Drosophila melanogaster CG2774-PA ...    54   2e-07
AY071431-1|AAL49053.1|  167|Drosophila melanogaster RE52028p pro...    49   4e-06
AE014297-1556|AAN13550.1|  110|Drosophila melanogaster CG6359-PB...    49   4e-06
AE014297-1555|AAF54838.1|  167|Drosophila melanogaster CG6359-PA...    49   4e-06
AY069705-1|AAL39850.1|  565|Drosophila melanogaster LD47602p pro...    44   1e-04
AF223381-1|AAF34701.1|  565|Drosophila melanogaster sorting nexi...    44   1e-04
AE014296-1715|AAF50219.2|  565|Drosophila melanogaster CG6757-PA...    44   1e-04
AY061149-1|AAL28697.1|  326|Drosophila melanogaster LD12265p pro...    35   0.100
AE014134-463|AAF51213.2|  326|Drosophila melanogaster CG3077-PA ...    35   0.100
BT010067-1|AAQ22536.1|  531|Drosophila melanogaster LD13361p pro...    32   0.53 
AY095047-1|AAM11375.1|  520|Drosophila melanogaster LD35592p pro...    32   0.53 
AE014298-781|AAF46072.2|  531|Drosophila melanogaster CG32758-PA...    32   0.53 
AE014134-2288|AAF53251.1|  520|Drosophila melanogaster CG5439-PA...    32   0.53 
BT001897-1|AAN71686.1|  407|Drosophila melanogaster SD19533p pro...    31   1.6  
AY118879-1|AAM50739.1|  228|Drosophila melanogaster HL01025p pro...    31   1.6  
AE013599-2542|AAF57807.1|  407|Drosophila melanogaster CG6410-PA...    31   1.6  
AY102684-1|AAM27513.1|  872|Drosophila melanogaster LD24134p pro...    30   2.1  
AE014297-1234|AAF54579.2|  872|Drosophila melanogaster CG6621-PA...    30   2.1  
AY051704-1|AAK93128.1|  681|Drosophila melanogaster LD24550p pro...    29   4.9  
AE014297-2470|AAF55518.1|  681|Drosophila melanogaster CG7156-PA...    29   4.9  

>AY119129-1|AAM50989.1|  458|Drosophila melanogaster RE32163p
           protein.
          Length = 458

 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 11/89 (12%)
 Frame = +3

Query: 21  RRYTEFEQIHDYLQVTYPHV--VIPPLPEKRVLYAWR------KSDTTDP---EFVERRR 167
           RR+++F  IHD L   Y  +  +IPP P K ++ + +      +S+   P   E+VE RR
Sbjct: 115 RRFSDFLGIHDLLVGKYMRLGRIIPPAPSKNIIGSTKVKISPQQSEPGTPMTQEWVEIRR 174

Query: 168 AGLENFLLRVASHPRLCFDDQFINFLQEE 254
           A LE F+ R A HP L  D  F+NFL+ +
Sbjct: 175 AALERFVHRTAQHPVLRVDLDFMNFLESD 203


>AE014134-602|AAF51109.1|  458|Drosophila melanogaster CG2774-PA
           protein.
          Length = 458

 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 11/89 (12%)
 Frame = +3

Query: 21  RRYTEFEQIHDYLQVTYPHV--VIPPLPEKRVLYAWR------KSDTTDP---EFVERRR 167
           RR+++F  IHD L   Y  +  +IPP P K ++ + +      +S+   P   E+VE RR
Sbjct: 115 RRFSDFLGIHDLLVGKYMRLGRIIPPAPSKNIIGSTKVKISPQQSEPGTPMTQEWVEIRR 174

Query: 168 AGLENFLLRVASHPRLCFDDQFINFLQEE 254
           A LE F+ R A HP L  D  F+NFL+ +
Sbjct: 175 AALERFVHRTAQHPVLRVDLDFMNFLESD 203


>AY071431-1|AAL49053.1|  167|Drosophila melanogaster RE52028p
           protein.
          Length = 167

 Score = 49.2 bits (112), Expect = 4e-06
 Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
 Frame = +3

Query: 12  TIWRRYTEFEQIHDYLQVTYPHVVIPPLPEKRVLYAWRKS-------DTTDPEFVERRRA 170
           ++ RRY++FE + + L+     +V+PPLP K    AW++           D  F+E RR 
Sbjct: 71  SVRRRYSDFEWLRNELERD-SKIVVPPLPGK----AWKRQMPFRGDEGIFDESFIEERRK 125

Query: 171 GLENFLLRVASHPRLCFDDQFIN-FLQEEMVGGKLSP 278
           GLE F+ ++A HP L  +++ ++ FLQE ++     P
Sbjct: 126 GLEAFINKIAGHP-LAQNERCLHMFLQENVIDKNYVP 161


>AE014297-1556|AAN13550.1|  110|Drosophila melanogaster CG6359-PB,
           isoform B protein.
          Length = 110

 Score = 49.2 bits (112), Expect = 4e-06
 Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
 Frame = +3

Query: 12  TIWRRYTEFEQIHDYLQVTYPHVVIPPLPEKRVLYAWRKS-------DTTDPEFVERRRA 170
           ++ RRY++FE + + L+     +V+PPLP K    AW++           D  F+E RR 
Sbjct: 14  SVRRRYSDFEWLRNELERD-SKIVVPPLPGK----AWKRQMPFRGDEGIFDESFIEERRK 68

Query: 171 GLENFLLRVASHPRLCFDDQFIN-FLQEEMVGGKLSP 278
           GLE F+ ++A HP L  +++ ++ FLQE ++     P
Sbjct: 69  GLEAFINKIAGHP-LAQNERCLHMFLQENVIDKNYVP 104


>AE014297-1555|AAF54838.1|  167|Drosophila melanogaster CG6359-PA,
           isoform A protein.
          Length = 167

 Score = 49.2 bits (112), Expect = 4e-06
 Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
 Frame = +3

Query: 12  TIWRRYTEFEQIHDYLQVTYPHVVIPPLPEKRVLYAWRKS-------DTTDPEFVERRRA 170
           ++ RRY++FE + + L+     +V+PPLP K    AW++           D  F+E RR 
Sbjct: 71  SVRRRYSDFEWLRNELERD-SKIVVPPLPGK----AWKRQMPFRGDEGIFDESFIEERRK 125

Query: 171 GLENFLLRVASHPRLCFDDQFIN-FLQEEMVGGKLSP 278
           GLE F+ ++A HP L  +++ ++ FLQE ++     P
Sbjct: 126 GLEAFINKIAGHP-LAQNERCLHMFLQENVIDKNYVP 161


>AY069705-1|AAL39850.1|  565|Drosophila melanogaster LD47602p
           protein.
          Length = 565

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 24/78 (30%), Positives = 43/78 (55%)
 Frame = +3

Query: 12  TIWRRYTEFEQIHDYLQVTYPHVVIPPLPEKRVLYAWRKSDTTDPEFVERRRAGLENFLL 191
           ++ RRY  F+ +H+ L   +  + +PPLP+K++      S   + +FVE RR  L+ F+ 
Sbjct: 251 SVSRRYKHFDWLHERLVDKFCLIPVPPLPDKQI------SGRYEEQFVEHRRVQLQEFVD 304

Query: 192 RVASHPRLCFDDQFINFL 245
            V  HP +   + + +FL
Sbjct: 305 WVCRHPVISKCEVWYHFL 322


>AF223381-1|AAF34701.1|  565|Drosophila melanogaster sorting nexin
           DSH3PX1 protein.
          Length = 565

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 24/78 (30%), Positives = 43/78 (55%)
 Frame = +3

Query: 12  TIWRRYTEFEQIHDYLQVTYPHVVIPPLPEKRVLYAWRKSDTTDPEFVERRRAGLENFLL 191
           ++ RRY  F+ +H+ L   +  + +PPLP+K++      S   + +FVE RR  L+ F+ 
Sbjct: 251 SVSRRYKHFDWLHERLVDKFCLIPVPPLPDKQI------SGRYEEQFVEHRRVQLQEFVD 304

Query: 192 RVASHPRLCFDDQFINFL 245
            V  HP +   + + +FL
Sbjct: 305 WVCRHPVISKCEVWYHFL 322


>AE014296-1715|AAF50219.2|  565|Drosophila melanogaster CG6757-PA
           protein.
          Length = 565

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 24/78 (30%), Positives = 43/78 (55%)
 Frame = +3

Query: 12  TIWRRYTEFEQIHDYLQVTYPHVVIPPLPEKRVLYAWRKSDTTDPEFVERRRAGLENFLL 191
           ++ RRY  F+ +H+ L   +  + +PPLP+K++      S   + +FVE RR  L+ F+ 
Sbjct: 251 SVSRRYKHFDWLHERLVDKFCLIPVPPLPDKQI------SGRYEEQFVEHRRVQLQEFVD 304

Query: 192 RVASHPRLCFDDQFINFL 245
            V  HP +   + + +FL
Sbjct: 305 WVCRHPVISKCEVWYHFL 322


>AY061149-1|AAL28697.1|  326|Drosophila melanogaster LD12265p
           protein.
          Length = 326

 Score = 34.7 bits (76), Expect = 0.100
 Identities = 26/80 (32%), Positives = 38/80 (47%)
 Frame = +3

Query: 15  IWRRYTEFEQIHDYLQVTYPHVVIPPLPEKRVLYAWRKSDTTDPEFVERRRAGLENFLLR 194
           I RRYT+F +++  L+  +P  +       +VL    KS     E +  R A  E FL  
Sbjct: 114 IERRYTDFRELYLGLKRQHPAEMANKYFPAKVLMGNFKS-----ELIGERSAAFEAFLTY 168

Query: 195 VASHPRLCFDDQFINFLQEE 254
           VAS   L   + F+ FLQ +
Sbjct: 169 VASQAMLRDSEYFLRFLQHD 188


>AE014134-463|AAF51213.2|  326|Drosophila melanogaster CG3077-PA
           protein.
          Length = 326

 Score = 34.7 bits (76), Expect = 0.100
 Identities = 26/80 (32%), Positives = 38/80 (47%)
 Frame = +3

Query: 15  IWRRYTEFEQIHDYLQVTYPHVVIPPLPEKRVLYAWRKSDTTDPEFVERRRAGLENFLLR 194
           I RRYT+F +++  L+  +P  +       +VL    KS     E +  R A  E FL  
Sbjct: 114 IERRYTDFRELYLGLKRQHPAEMANKYFPAKVLMGNFKS-----ELIGERSAAFEAFLTY 168

Query: 195 VASHPRLCFDDQFINFLQEE 254
           VAS   L   + F+ FLQ +
Sbjct: 169 VASQAMLRDSEYFLRFLQHD 188


>BT010067-1|AAQ22536.1|  531|Drosophila melanogaster LD13361p
           protein.
          Length = 531

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 24/87 (27%), Positives = 41/87 (47%)
 Frame = +3

Query: 21  RRYTEFEQIHDYLQVTYPHVVIPPLPEKRVLYAWRKSDTTDPEFVERRRAGLENFLLRVA 200
           RRY EF  +H  L+  +     P LP K   + ++ S+    + ++ RR GLE +L +V 
Sbjct: 200 RRYREFANLHSLLRKEFSGFNFPKLPGK---WPFQLSE----QQLDTRRRGLEQYLEKVC 252

Query: 201 SHPRLCFDDQFINFLQEEMVGGKLSPI 281
           +   +   D   +FL +       SP+
Sbjct: 253 AVRVIAESDAVQDFLTDTEDDISASPV 279


>AY095047-1|AAM11375.1|  520|Drosophila melanogaster LD35592p
           protein.
          Length = 520

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 21/62 (33%), Positives = 31/62 (50%)
 Frame = +3

Query: 12  TIWRRYTEFEQIHDYLQVTYPHVVIPPLPEKRVLYAWRKSDTTDPEFVERRRAGLENFLL 191
           T +RRY+EF ++H  L  T+P V     P K      +     +  FVE RR  L+ +LL
Sbjct: 439 TFFRRYSEFYKLHKSLLKTHPVVSAVEFPPK------KHFGNMNLVFVEERRQQLQIYLL 492

Query: 192 RV 197
            +
Sbjct: 493 NL 494


>AE014298-781|AAF46072.2|  531|Drosophila melanogaster CG32758-PA
           protein.
          Length = 531

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 24/87 (27%), Positives = 41/87 (47%)
 Frame = +3

Query: 21  RRYTEFEQIHDYLQVTYPHVVIPPLPEKRVLYAWRKSDTTDPEFVERRRAGLENFLLRVA 200
           RRY EF  +H  L+  +     P LP K   + ++ S+    + ++ RR GLE +L +V 
Sbjct: 200 RRYREFANLHSLLRKEFSGFNFPKLPGK---WPFQLSE----QQLDTRRRGLEQYLEKVC 252

Query: 201 SHPRLCFDDQFINFLQEEMVGGKLSPI 281
           +   +   D   +FL +       SP+
Sbjct: 253 AVRVIAESDAVQDFLTDTEDDISASPV 279


>AE014134-2288|AAF53251.1|  520|Drosophila melanogaster CG5439-PA
           protein.
          Length = 520

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 21/62 (33%), Positives = 31/62 (50%)
 Frame = +3

Query: 12  TIWRRYTEFEQIHDYLQVTYPHVVIPPLPEKRVLYAWRKSDTTDPEFVERRRAGLENFLL 191
           T +RRY+EF ++H  L  T+P V     P K      +     +  FVE RR  L+ +LL
Sbjct: 439 TFFRRYSEFYKLHKSLLKTHPVVSAVEFPPK------KHFGNMNLVFVEERRQQLQIYLL 492

Query: 192 RV 197
            +
Sbjct: 493 NL 494


>BT001897-1|AAN71686.1|  407|Drosophila melanogaster SD19533p
           protein.
          Length = 407

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 18/67 (26%), Positives = 36/67 (53%)
 Frame = +3

Query: 15  IWRRYTEFEQIHDYLQVTYPHVVIPPLPEKRVLYAWRKSDTTDPEFVERRRAGLENFLLR 194
           + RRYT+F +++  L+  +P++ +  LP K++       D  +  F++ R  GL+ F+  
Sbjct: 256 VMRRYTDFVRLNSKLKQAFPNLTL-MLPRKKLF-----GDNFNAVFLDNRVQGLQIFVNS 309

Query: 195 VASHPRL 215
           V +   L
Sbjct: 310 VMAKEEL 316


>AY118879-1|AAM50739.1|  228|Drosophila melanogaster HL01025p
           protein.
          Length = 228

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 18/67 (26%), Positives = 36/67 (53%)
 Frame = +3

Query: 15  IWRRYTEFEQIHDYLQVTYPHVVIPPLPEKRVLYAWRKSDTTDPEFVERRRAGLENFLLR 194
           + RRYT+F +++  L+  +P++ +  LP K++       D  +  F++ R  GL+ F+  
Sbjct: 77  VMRRYTDFVRLNSKLKQAFPNLTL-MLPRKKLF-----GDNFNAVFLDNRVQGLQIFVNS 130

Query: 195 VASHPRL 215
           V +   L
Sbjct: 131 VMAKEEL 137


>AE013599-2542|AAF57807.1|  407|Drosophila melanogaster CG6410-PA
           protein.
          Length = 407

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 18/67 (26%), Positives = 36/67 (53%)
 Frame = +3

Query: 15  IWRRYTEFEQIHDYLQVTYPHVVIPPLPEKRVLYAWRKSDTTDPEFVERRRAGLENFLLR 194
           + RRYT+F +++  L+  +P++ +  LP K++       D  +  F++ R  GL+ F+  
Sbjct: 256 VMRRYTDFVRLNSKLKQAFPNLTL-MLPRKKLF-----GDNFNAVFLDNRVQGLQIFVNS 309

Query: 195 VASHPRL 215
           V +   L
Sbjct: 310 VMAKEEL 316


>AY102684-1|AAM27513.1|  872|Drosophila melanogaster LD24134p
           protein.
          Length = 872

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -1

Query: 259 TISSCRKLMN*SSKHSRG*DATRNRKFSKPARRRSTNS 146
           T+SS RKL+  +SKH +     + +K  K  RR  T S
Sbjct: 503 TVSSVRKLLREASKHKKAKKKGKKKKDKKERRRSRTKS 540


>AE014297-1234|AAF54579.2|  872|Drosophila melanogaster CG6621-PA
           protein.
          Length = 872

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -1

Query: 259 TISSCRKLMN*SSKHSRG*DATRNRKFSKPARRRSTNS 146
           T+SS RKL+  +SKH +     + +K  K  RR  T S
Sbjct: 503 TVSSVRKLLREASKHKKAKKKGKKKKDKKERRRSRTKS 540


>AY051704-1|AAK93128.1|  681|Drosophila melanogaster LD24550p
           protein.
          Length = 681

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 22/102 (21%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
 Frame = +3

Query: 15  IWRRYTEFEQIHDYLQVTYPHVVIP---PLPEKRVLYAWRKSDTTDPEFVERRRAGLENF 185
           +W+R+ + +++H  L   +  + +P   P+P     +        D   ++RR+  +   
Sbjct: 47  VWKRFHDVKRLHRELSRRHKSLQLPGKLPVPTDSTYFK-----RFDAAVIQRRKEYILQL 101

Query: 186 LLRVASHPRLCFDDQFINFLQEEMVGGKLSPIVDIYYKLKIK 311
           L   A HP L     F  F Q E      SP+  +Y +  ++
Sbjct: 102 LDFAAQHPALYKCSTFTQFFQ-ETPSPNGSPLKKLYVERSLR 142


>AE014297-2470|AAF55518.1|  681|Drosophila melanogaster CG7156-PA,
           isoform A protein.
          Length = 681

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 22/102 (21%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
 Frame = +3

Query: 15  IWRRYTEFEQIHDYLQVTYPHVVIP---PLPEKRVLYAWRKSDTTDPEFVERRRAGLENF 185
           +W+R+ + +++H  L   +  + +P   P+P     +        D   ++RR+  +   
Sbjct: 47  VWKRFHDVKRLHRELSRRHKSLQLPGKLPVPTDSTYFK-----RFDAAVIQRRKEYILQL 101

Query: 186 LLRVASHPRLCFDDQFINFLQEEMVGGKLSPIVDIYYKLKIK 311
           L   A HP L     F  F Q E      SP+  +Y +  ++
Sbjct: 102 LDFAAQHPALYKCSTFTQFFQ-ETPSPNGSPLKKLYVERSLR 142


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,363,480
Number of Sequences: 53049
Number of extensions: 628380
Number of successful extensions: 1475
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1472
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)