Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20358
(758 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 28 0.083
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 25 0.58
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 24 1.8
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 2.4
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 2.4
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 23 3.1
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 22 7.2
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 22 7.2
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 7.2
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 22 7.2
AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding prote... 22 7.2
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 9.5
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 28.3 bits (60), Expect = 0.083
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = +2
Query: 41 TVVQDQEITTAIPVSTKLTEYPETTQKTFEAETPATDTTESDEDVK--APVKTEFEKATS 214
T+ TT +T T P TTQ A TP E D+ A + E EKA
Sbjct: 657 TITTITTTTTTTTTTTTTTTTPNTTQNA-SATTPPPQVDEVDDKELSGAEEEKEVEKALL 715
Query: 215 SPVLT 229
P+L+
Sbjct: 716 KPLLS 720
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 25.4 bits (53), Expect = 0.58
Identities = 20/89 (22%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Frame = +1
Query: 253 TSEHEVHEKTTDVPTTEFVTSYSKLPENAETSDISDLDQTTDSAIL---STTSVSDEHKT 423
T E ++ TT+ V S K + +E +I+D TT+ +++ TT+++ +
Sbjct: 786 TKETTPKKERKTATTTQPVISSRKEQKKSEEKNINDHCVTTEQSVVVTNVTTTINTPTTS 845
Query: 424 VTEAEKSPIVTTEIPSMGIT-NDIEENKE 507
V + + T +P+ + N I K+
Sbjct: 846 VISMSGTTVPITSLPASSTSINSITVEKD 874
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 23.8 bits (49), Expect = 1.8
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -1
Query: 659 FICLGYVSGFFYFLS-IVSRVNWNINGN 579
+ L Y+SG FY+LS V+ + +NI N
Sbjct: 326 YTILTYMSGVFYYLSTTVNPLLYNIMSN 353
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.4 bits (48), Expect = 2.4
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -1
Query: 506 SLFSSISFVIPIEGISVVTIGDF 438
+LF +++ +IP GIS +T+ F
Sbjct: 244 TLFYTVNIIIPCMGISFLTVLTF 266
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.4 bits (48), Expect = 2.4
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -1
Query: 506 SLFSSISFVIPIEGISVVTIGDF 438
+LF +++ +IP GIS +T+ F
Sbjct: 244 TLFYTVNIIIPCMGISFLTVLTF 266
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 23.0 bits (47), Expect = 3.1
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = -1
Query: 506 SLFSSISFVIPIEGISVVTI 447
+LF +++ +IP GIS +T+
Sbjct: 240 TLFYTVNLIIPCMGISFLTV 259
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 21.8 bits (44), Expect = 7.2
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 58 RNNNSYSSIDKVDRISR 108
R Y+S+ K+DR SR
Sbjct: 412 RRTPRYNSVSKIDRASR 428
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 21.8 bits (44), Expect = 7.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -1
Query: 692 GSNVLGISCSCFICLGYVS 636
G +LGI C +CL + S
Sbjct: 379 GGYLLGIQCLTVVCLAFWS 397
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.8 bits (44), Expect = 7.2
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +1
Query: 283 TDVPTTEFVTSYSKLPENAETSDISDLDQTT--DSAILSTTSVSD 411
T E TS K+P N T + S+LD+T D + ++T++ +
Sbjct: 1217 TKADNAEEPTS-QKVPPNQLTHEASELDKTRRYDFWVTASTNIGE 1260
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.8 bits (44), Expect = 7.2
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 325 LPENAETSDISDLDQTTDSAILSTTSVSDEHKTVT 429
LP+ ++++++DLD + + S S+SD K T
Sbjct: 523 LPQ-LDSTELADLDISLSENLSSGLSISDSTKPET 556
>AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding protein
ASP5 protein.
Length = 143
Score = 21.8 bits (44), Expect = 7.2
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +3
Query: 594 PVYTADYGQEVKETTNIPETYETTAADTKDITTELAKGEIPDITSIQ 734
PV + Q K N+ ++ A T+++ + +GE PD +Q
Sbjct: 20 PVKSMSADQVEKLAKNMRKSCLQKIAITEELVDGMRRGEFPDDHDLQ 66
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = -1
Query: 506 SLFSSISFVIPIEGISVVTI 447
+LF +++ +IP GIS +++
Sbjct: 236 TLFYTVNLIIPCVGISFLSV 255
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,664
Number of Sequences: 438
Number of extensions: 4747
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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