Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20351
(709 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 109 5e-23
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 109 9e-23
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 107 3e-22
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 98 2e-19
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 90 4e-17
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 88 2e-16
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 87 3e-16
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 82 1e-14
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 82 1e-14
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 82 2e-14
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 81 3e-14
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 79 1e-13
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 79 1e-13
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 71 3e-11
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 70 5e-11
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 67 3e-10
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 67 5e-10
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 66 6e-10
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 64 3e-09
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 61 2e-08
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 60 7e-08
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 56 9e-07
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 54 3e-06
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 53 8e-06
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 49 1e-04
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 48 2e-04
UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarc... 47 4e-04
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 46 7e-04
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 46 0.001
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 44 0.003
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 43 0.006
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 43 0.009
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 42 0.020
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 40 0.045
UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole gen... 37 0.56
UniRef50_Q9VJJ9 Cluster: CG31738-PB, isoform B; n=3; Drosophila ... 37 0.56
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 36 0.74
UniRef50_Q6ZS86 Cluster: Glycerol kinase 5; n=26; Euteleostomi|R... 36 1.3
UniRef50_Q7F729 Cluster: OSJNBa0004B13.22 protein; n=2; Oryza sa... 35 1.7
UniRef50_Q2J5X5 Cluster: Putative uncharacterized protein; n=3; ... 35 2.3
UniRef50_A5P4M3 Cluster: Putative uncharacterized protein precur... 34 3.0
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 34 3.0
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 34 3.9
UniRef50_UPI000059FF73 Cluster: PREDICTED: hypothetical protein ... 33 5.2
UniRef50_Q2T2X7 Cluster: Transcriptional regulator, GntR family;... 33 5.2
UniRef50_UPI0000E1F6E9 Cluster: PREDICTED: hypothetical protein;... 33 6.9
UniRef50_Q1AWB5 Cluster: Carboxylate-amine ligase Rxyl_1350; n=1... 33 6.9
UniRef50_UPI000058888F Cluster: PREDICTED: similar to ENSANGP000... 33 9.1
UniRef50_Q0S4B0 Cluster: Putative uncharacterized protein; n=2; ... 33 9.1
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 109 bits (263), Expect = 5e-23
Identities = 50/57 (87%), Positives = 54/57 (94%)
Frame = +1
Query: 508 EINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKGSG 678
EINKTKQAVIFLRR+KAWSD+LKVYKSQRLRAGKGKMRNRRR+ RKGPLII+NK G
Sbjct: 25 EINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRLHRKGPLIIYNKDQG 81
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 109 bits (261), Expect = 9e-23
Identities = 52/75 (69%), Positives = 61/75 (81%)
Frame = +1
Query: 31 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 210
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 211 HQTSAESWGTGRAVA 255
HQTSAESWGTGRAVA
Sbjct: 60 HQTSAESWGTGRAVA 74
Score = 91.1 bits (216), Expect = 2e-17
Identities = 37/38 (97%), Positives = 37/38 (97%)
Frame = +3
Query: 255 RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 368
RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 75 RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 89.8 bits (213), Expect = 6e-17
Identities = 39/54 (72%), Positives = 49/54 (90%)
Frame = +1
Query: 517 KTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKGSG 678
KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+ +G
Sbjct: 163 KTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG 216
Score = 48.0 bits (109), Expect = 2e-04
Identities = 20/33 (60%), Positives = 29/33 (87%)
Frame = +2
Query: 410 SVAATGVPALVQARGHIIEKIPELPLVVADKVQ 508
++AA+ +PALV ++GH IE++PELPLVV DKV+
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVE 159
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 107 bits (256), Expect = 3e-22
Identities = 52/77 (67%), Positives = 61/77 (79%)
Frame = +1
Query: 25 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 204
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 205 AGHQTSAESWGTGRAVA 255
AGHQTSAESWGTGRAVA
Sbjct: 61 AGHQTSAESWGTGRAVA 77
Score = 90.6 bits (215), Expect = 3e-17
Identities = 40/62 (64%), Positives = 51/62 (82%)
Frame = +1
Query: 493 SRQSPEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKG 672
S + ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR+RRRI R+GPL++++K
Sbjct: 158 SDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRGPLVVYDKD 217
Query: 673 SG 678
G
Sbjct: 218 EG 219
Score = 87.0 bits (206), Expect = 4e-16
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +3
Query: 255 RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 368
RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 78 RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 115
Score = 51.2 bits (117), Expect = 2e-05
Identities = 21/37 (56%), Positives = 32/37 (86%)
Frame = +2
Query: 401 LGGSVAATGVPALVQARGHIIEKIPELPLVVADKVQR 511
L ++AA+GVPALVQ++GH+I+ + E PLVV+D+VQ+
Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQK 163
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 97.9 bits (233), Expect = 2e-19
Identities = 47/72 (65%), Positives = 53/72 (73%)
Frame = +1
Query: 40 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 219
+RP VSV S T G PLP VF +PIRPD+V VH M+KN RQPY VS++AGHQT
Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQT 61
Query: 220 SAESWGTGRAVA 255
SAESWGTGRAVA
Sbjct: 62 SAESWGTGRAVA 73
Score = 81.0 bits (191), Expect = 3e-14
Identities = 32/38 (84%), Positives = 34/38 (89%)
Frame = +3
Query: 255 RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 368
RIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 74 RIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWH 111
Score = 53.2 bits (122), Expect = 6e-06
Identities = 24/56 (42%), Positives = 38/56 (67%)
Frame = +1
Query: 499 QSPEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFN 666
+ +I +T A L+ + A D+ KV S++LRAGKGK+R RR QR+GPL++++
Sbjct: 159 EGAKIARTAAAAGLLKTVGALKDVEKVKDSRKLRAGKGKLRGRRHRQRRGPLVVYD 214
Score = 40.7 bits (91), Expect = 0.034
Identities = 19/46 (41%), Positives = 32/46 (69%)
Frame = +2
Query: 410 SVAATGVPALVQARGHIIEKIPELPLVVADKVQRSTRPNRLSSS*G 547
++AA+GVPAL+ ARGH I ++ E+PLV+ +V + R +++ G
Sbjct: 126 ALAASGVPALLFARGHQISEVAEVPLVINSEVFEGAKIARTAAAAG 171
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 90.2 bits (214), Expect = 4e-17
Identities = 43/66 (65%), Positives = 51/66 (77%)
Frame = +1
Query: 58 VYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWG 237
VY++KSE + LP VF+AP+RPD+V+ VH + KN RQPY VS EAGHQTSAESWG
Sbjct: 127 VYNDKSEPTDTQIR-LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQTSAESWG 185
Query: 238 TGRAVA 255
TGRAVA
Sbjct: 186 TGRAVA 191
Score = 86.6 bits (205), Expect = 5e-16
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +3
Query: 255 RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 368
RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 192 RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWH 229
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 88.2 bits (209), Expect = 2e-16
Identities = 43/75 (57%), Positives = 53/75 (70%)
Frame = +1
Query: 31 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 210
++ ARP+VSV+ T ++ PLP VF +P+R DLV V +MSKN RQ Y VS +AG
Sbjct: 1 MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAG 60
Query: 211 HQTSAESWGTGRAVA 255
HQ SAESWGTGRAVA
Sbjct: 61 HQHSAESWGTGRAVA 75
Score = 67.3 bits (157), Expect = 3e-10
Identities = 28/38 (73%), Positives = 31/38 (81%)
Frame = +3
Query: 255 RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 368
RIPRV GT RSGQGAFGNMCRGG MF+P K +RR+H
Sbjct: 76 RIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFH 113
Score = 48.8 bits (111), Expect = 1e-04
Identities = 19/36 (52%), Positives = 29/36 (80%)
Frame = +2
Query: 401 LGGSVAATGVPALVQARGHIIEKIPELPLVVADKVQ 508
+ ++AATG P+LV ARGH I +PELPLV+++++Q
Sbjct: 125 VAAAIAATGCPSLVMARGHRINNVPELPLVISNEIQ 160
Score = 48.8 bits (111), Expect = 1e-04
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Frame = +1
Query: 493 SRQSPEINKTKQAVIFLRRL-KAWSDILK-VYKSQRLRAGKGKMRNRRRIQRKGPLIIFN 666
S + INKT AV F + K + +K + S +R GKGKMRNRRR+ GPL+++
Sbjct: 156 SNEIQNINKTSTAVEFFKNFGKGLEEEMKRIESSIAIRCGKGKMRNRRRVCAVGPLVVYA 215
Query: 667 KGSG 678
+ +G
Sbjct: 216 EDNG 219
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 87.4 bits (207), Expect = 3e-16
Identities = 44/72 (61%), Positives = 52/72 (72%)
Frame = +1
Query: 40 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 219
ARP VSVYS S++V G PLP VF APIR D+V VH +M+KNSRQ Y V++ +G
Sbjct: 3 ARPSVSVYSASSDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSGMNH 61
Query: 220 SAESWGTGRAVA 255
SA SWGTGRAVA
Sbjct: 62 SAHSWGTGRAVA 73
Score = 74.9 bits (176), Expect = 2e-12
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = +3
Query: 255 RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 368
RIPR+ GGGT SG GAFGNMCRGGRMFAPTK +RRWH
Sbjct: 74 RIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWH 111
Score = 58.8 bits (136), Expect = 1e-07
Identities = 26/55 (47%), Positives = 41/55 (74%), Gaps = 2/55 (3%)
Frame = +1
Query: 517 KTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIF--NKGS 675
KTK+A+ FL+ + A D+ +V S+ +RAG+GKMRNRR + R+GP+++ NKG+
Sbjct: 162 KTKEAMAFLKAIAAIDDVNRVNDSREIRAGRGKMRNRRYVARRGPMLVMPNNKGT 216
Score = 43.6 bits (98), Expect = 0.005
Identities = 18/33 (54%), Positives = 26/33 (78%)
Frame = +2
Query: 410 SVAATGVPALVQARGHIIEKIPELPLVVADKVQ 508
++AA+ VP+LV +RGH I +PE+PLVV D +Q
Sbjct: 126 ALAASSVPSLVMSRGHQIGNVPEVPLVVEDSIQ 158
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/73 (53%), Positives = 53/73 (72%)
Frame = +1
Query: 37 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 216
V RP+VSV+S +E G+ +P VF P+R DLV+ VH +MSKN RQ Y +S+ +G+Q
Sbjct: 2 VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQ 60
Query: 217 TSAESWGTGRAVA 255
TSA SWGTGRA++
Sbjct: 61 TSARSWGTGRALS 73
Score = 71.3 bits (167), Expect = 2e-11
Identities = 27/38 (71%), Positives = 30/38 (78%)
Frame = +3
Query: 255 RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 368
R PRV+GGGTHRSGQ A+ N CR G MFAPT+ WR WH
Sbjct: 74 RTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTWRHWH 111
Score = 42.3 bits (95), Expect = 0.011
Identities = 20/40 (50%), Positives = 27/40 (67%)
Frame = +2
Query: 401 LGGSVAATGVPALVQARGHIIEKIPELPLVVADKVQRSTR 520
L SVAAT LV +RGH +E +PELPLV+ D ++ T+
Sbjct: 123 LAVSVAATASVPLVMSRGHRVESVPELPLVLDDTMETLTK 162
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 82.2 bits (194), Expect = 1e-14
Identities = 41/71 (57%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Frame = +1
Query: 46 PLVSVYSEKSET-VQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 222
PLVSV+S T V PLP VF+ PIRPD+V+ VH +++KN RQ + V+ +AG Q S
Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAGMQHS 64
Query: 223 AESWGTGRAVA 255
AESWGTGRAVA
Sbjct: 65 AESWGTGRAVA 75
Score = 70.5 bits (165), Expect = 4e-11
Identities = 29/38 (76%), Positives = 29/38 (76%)
Frame = +3
Query: 255 RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 368
RIPRV G GTHRSGQ AFGN CR GRM P K WRRWH
Sbjct: 76 RIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVWRRWH 113
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = +2
Query: 410 SVAATGVPALVQARGHIIEKIPELPLVVADKVQ 508
+VAATG+ LV ARGH I ++P++PLVV DK++
Sbjct: 128 AVAATGIVPLVLARGHRISQVPQIPLVVEDKIE 160
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = +1
Query: 517 KTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIF 663
KT A+ FL+R A+ D+ KV ++ +RAG K R ++ RKGPL+++
Sbjct: 164 KTTDALNFLKRFGAFEDVQKVVSTKVVRAGISKQRGKKYRVRKGPLVVY 212
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 81.8 bits (193), Expect = 2e-14
Identities = 36/54 (66%), Positives = 46/54 (85%)
Frame = +1
Query: 517 KTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKGSG 678
KTK+ V+ L++LKAW+DI KVY SQR+RAGKGKMRNRR IQR+G II+N+ +G
Sbjct: 104 KTKEEVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRPIQRRGSCIIYNEDNG 157
Score = 60.5 bits (140), Expect = 4e-08
Identities = 26/38 (68%), Positives = 31/38 (81%)
Frame = +1
Query: 136 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRA 249
D+VN VH ++ KN QPY VS+ AG+QTSAESWGTGRA
Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQTSAESWGTGRA 62
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 81.0 bits (191), Expect = 3e-14
Identities = 32/38 (84%), Positives = 34/38 (89%)
Frame = +3
Query: 255 RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 368
RIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 51 RIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWH 88
Score = 57.6 bits (133), Expect = 3e-07
Identities = 27/52 (51%), Positives = 36/52 (69%)
Frame = +1
Query: 511 INKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFN 666
I KT AV L+ + A +D K S++LRAGKGK+R RR QR+GPL+I+N
Sbjct: 140 IRKTSAAVALLKAVGAGADCEKAKNSRKLRAGKGKLRGRRHKQRRGPLVIYN 191
Score = 42.7 bits (96), Expect = 0.009
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +1
Query: 169 KNSRQPYCVSKEAGHQTSAESWGTGRAVA 255
++++ V +AGHQTSAESWGTGRAVA
Sbjct: 22 ESTKDTLTVPNKAGHQTSAESWGTGRAVA 50
Score = 39.5 bits (88), Expect = 0.079
Identities = 15/29 (51%), Positives = 24/29 (82%)
Frame = +2
Query: 410 SVAATGVPALVQARGHIIEKIPELPLVVA 496
++AA+G PAL+ ARGH + +PE+PLV++
Sbjct: 103 ALAASGSPALLMARGHNVSTVPEVPLVIS 131
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 79.0 bits (186), Expect = 1e-13
Identities = 38/75 (50%), Positives = 50/75 (66%)
Frame = +1
Query: 31 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 210
++ RPL +VY + V G + +P VF+ PIR DL+ + +MSKN R PY V AG
Sbjct: 1 MATIRPLANVYGINGKKVVGEVE-IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAG 59
Query: 211 HQTSAESWGTGRAVA 255
++TSAESWGTGRAVA
Sbjct: 60 YETSAESWGTGRAVA 74
Score = 75.4 bits (177), Expect = 1e-12
Identities = 31/37 (83%), Positives = 32/37 (86%)
Frame = +3
Query: 255 RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 365
RIPRV GGGTHR+GQ AFGNMCRGG MF PTK WRRW
Sbjct: 75 RIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRW 111
Score = 48.0 bits (109), Expect = 2e-04
Identities = 26/62 (41%), Positives = 36/62 (58%)
Frame = +1
Query: 493 SRQSPEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKG 672
S + KTK A+ FL L ++ ++ KS +LRA GKMRNR+ GPLII++
Sbjct: 155 SNDIESMQKTKDALKFLISLGLRDEVNRLIKSXKLRARXGKMRNRKYKISNGPLIIYSXD 214
Query: 673 SG 678
SG
Sbjct: 215 SG 216
Score = 37.5 bits (83), Expect = 0.32
Identities = 15/33 (45%), Positives = 25/33 (75%)
Frame = +2
Query: 410 SVAATGVPALVQARGHIIEKIPELPLVVADKVQ 508
S+AA+G+ +LV ARGH I + E+PLV ++ ++
Sbjct: 127 SIAASGITSLVLARGHRISNLKEVPLVASNDIE 159
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 78.6 bits (185), Expect = 1e-13
Identities = 41/71 (57%), Positives = 49/71 (69%)
Frame = +1
Query: 43 RPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 222
RP VSV++ GA +P VF AP+R DLV VH +MSKN RQ Y VSK +G+QTS
Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQTS 62
Query: 223 AESWGTGRAVA 255
A SWGTGRA+A
Sbjct: 63 ARSWGTGRAMA 73
Score = 72.1 bits (169), Expect = 1e-11
Identities = 26/38 (68%), Positives = 32/38 (84%)
Frame = +3
Query: 255 RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 368
R+PRV+GGGTHR+GQ A+ N CR G M+APT+ WRRWH
Sbjct: 74 RVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVWRRWH 111
Score = 37.1 bits (82), Expect = 0.42
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +2
Query: 401 LGGSVAATGVPALVQARGHIIEKIPELPLVVADKVQR 511
L ++AAT V +V +RGH IE + E+P+VV D +++
Sbjct: 123 LASALAATAVVPVVMSRGHRIEALREVPMVVDDAIEQ 159
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 70.9 bits (166), Expect = 3e-11
Identities = 37/72 (51%), Positives = 48/72 (66%)
Frame = +1
Query: 40 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 219
+RP V++Y + + LP VF APIR D+V+ V+ + SKN+RQP VS +AG Q
Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQH 62
Query: 220 SAESWGTGRAVA 255
SA SWGTGRAVA
Sbjct: 63 SAISWGTGRAVA 74
Score = 65.7 bits (153), Expect = 1e-09
Identities = 29/57 (50%), Positives = 43/57 (75%)
Frame = +1
Query: 493 SRQSPEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIF 663
S+ I KTKQAV L+++ A+SD+LKV S+ +RAG+GKMR R+ +RKGPL+++
Sbjct: 156 SKSISVIKKTKQAVYLLKKINAYSDVLKVIASKTVRAGQGKMRGRKIKERKGPLVVY 212
Score = 57.2 bits (132), Expect = 4e-07
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = +3
Query: 255 RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 365
RIPR+ G G+ R+GQGAFGNM R G MF+P K +R+W
Sbjct: 75 RIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKW 111
Score = 41.1 bits (92), Expect = 0.026
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = +2
Query: 413 VAATGVPALVQARGHIIEKIPELPLVVADK 502
+AA+ VPALV ARGH I +P++PLVV K
Sbjct: 128 IAASAVPALVSARGHHIAGVPQIPLVVNSK 157
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 70.1 bits (164), Expect = 5e-11
Identities = 27/38 (71%), Positives = 30/38 (78%)
Frame = +3
Query: 255 RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 368
R+PRV G GTHRSGQGA N CRGGR+F PT WR+WH
Sbjct: 70 RVPRVPGSGTHRSGQGAIANFCRGGRIFNPTTIWRKWH 107
Score = 60.5 bits (140), Expect = 4e-08
Identities = 30/51 (58%), Positives = 35/51 (68%)
Frame = +1
Query: 103 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVA 255
+P VF + IR D+V VH +M KN RQ Y VS AG TSA SWGTGRAV+
Sbjct: 19 IPKVFFSKIRVDIVRFVHKNMCKNKRQVYAVSSTAGMGTSAVSWGTGRAVS 69
Score = 38.3 bits (85), Expect = 0.18
Identities = 20/52 (38%), Positives = 33/52 (63%)
Frame = +1
Query: 508 EINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIF 663
+I KT+ + L L + I++ ++L++GKGKMRNRR + GPL++F
Sbjct: 155 KIPKTRDLIKILTTLGI-NSIVRNKLKRKLKSGKGKMRNRRFKKPTGPLLVF 205
Score = 35.1 bits (77), Expect = 1.7
Identities = 10/40 (25%), Positives = 29/40 (72%)
Frame = +2
Query: 392 ESGLGGSVAATGVPALVQARGHIIEKIPELPLVVADKVQR 511
+S + ++A++ + +++ +RG+ ++ IPE+P V+ D +++
Sbjct: 116 KSAIFSAIASSSIVSIIVSRGYRVKTIPEIPFVIEDSIEK 155
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 67.3 bits (157), Expect = 3e-10
Identities = 34/70 (48%), Positives = 41/70 (58%)
Frame = +1
Query: 46 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA 225
P V V+ V A P P VF P+RPD++N VH + K R PY VS+ AG Q +A
Sbjct: 3 PTVKVFGPTGTQV--AELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAGVQCTA 60
Query: 226 ESWGTGRAVA 255
SWG GRAVA
Sbjct: 61 HSWGPGRAVA 70
Score = 56.4 bits (130), Expect = 6e-07
Identities = 24/52 (46%), Positives = 36/52 (69%)
Frame = +1
Query: 511 INKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFN 666
+ KTK A+ ++ + D+ + S+ +RAG+GKMRNRR I RKGPL+I+N
Sbjct: 149 VTKTKDALAIIKAVGVLRDVERCKDSRHIRAGRGKMRNRRYITRKGPLVIYN 200
Score = 34.7 bits (76), Expect = 2.3
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +2
Query: 401 LGGSVAATGVPALVQARGHIIEKIPELPLVV-ADKVQRS 514
+ ++AA+ ALV+ARGH I +P +PLVV D V ++
Sbjct: 114 VASALAASANAALVEARGHRIADVPSIPLVVDTDNVTKT 152
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 66.9 bits (156), Expect = 5e-10
Identities = 34/69 (49%), Positives = 46/69 (66%)
Frame = +1
Query: 49 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAE 228
L +VY+ + A P + +PIRPD+V+ VH++++KN RQP+ AGHQ SAE
Sbjct: 7 LTTVYNTDGKARDTTAVPSVIRY-SPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQHSAE 65
Query: 229 SWGTGRAVA 255
SWGTGRAVA
Sbjct: 66 SWGTGRAVA 74
Score = 62.5 bits (145), Expect = 1e-08
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = +3
Query: 255 RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 368
R+PR+ G GT R+GQ AF N RGG M++P K WRRWH
Sbjct: 75 RVPRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWH 112
Score = 55.2 bits (127), Expect = 1e-06
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = +1
Query: 508 EINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKGSG 678
+I KTK+AV L LKA D+ +S+R+R G GK RNRR QR+G LI+ ++ G
Sbjct: 160 QIKKTKEAVKVLAALKASDDVKHSAESKRIRVGSGKARNRRYTQRRGVLIVHDQNEG 216
Score = 44.8 bits (101), Expect = 0.002
Identities = 19/34 (55%), Positives = 28/34 (82%)
Frame = +2
Query: 410 SVAATGVPALVQARGHIIEKIPELPLVVADKVQR 511
++AA+ P+LV ARGH I+ +PELPLVV+D V++
Sbjct: 127 AIAASSNPSLVLARGHKIDNVPELPLVVSDDVEQ 160
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 66.5 bits (155), Expect = 6e-10
Identities = 29/56 (51%), Positives = 45/56 (80%)
Frame = +1
Query: 511 INKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKGSG 678
I KT +AV L++L A++DI KV S+ +R+GKGKMRNRR +QR+GPL+++++ +G
Sbjct: 164 IKKTAKAVELLKQLGAYADIEKVKASRNVRSGKGKMRNRRYVQRRGPLVVYSEDNG 219
Score = 44.4 bits (100), Expect = 0.003
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Frame = +2
Query: 410 SVAATGVPALVQARGHIIEKIPELPLVV---ADKVQRSTRPNRLSSS*GASRHGLISLRC 580
++AA+ VP+L+ ARGH +E +PE+PLVV A ++++ + L GA + I
Sbjct: 130 AIAASAVPSLLLARGHRVEGVPEVPLVVDDSASSIKKTAKAVELLKQLGA--YADIEKVK 187
Query: 581 TSLSVFVLVRVKCAXXXXXXXXXXXXXXXXXQGLTRAFRNIPG 709
S +V + K G+TRAFRNIPG
Sbjct: 188 ASRNV-RSGKGKMRNRRYVQRRGPLVVYSEDNGVTRAFRNIPG 229
Score = 35.9 bits (79), Expect = 0.98
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +1
Query: 88 GAAKPLPFVFKAPIRPDLVNDVHVSMSKN 174
GA+ +P VF +PIR D+VN VH ++KN
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKN 43
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 64.1 bits (149), Expect = 3e-09
Identities = 34/68 (50%), Positives = 40/68 (58%)
Frame = +1
Query: 52 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 231
++ Y TV+ LP VF PIR DLV + +RQPY VSK AG Q SAES
Sbjct: 5 INCYEADGVTVKKTLD-LPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQHSAES 63
Query: 232 WGTGRAVA 255
WGTGRA+A
Sbjct: 64 WGTGRAIA 71
Score = 63.3 bits (147), Expect = 6e-09
Identities = 26/37 (70%), Positives = 29/37 (78%)
Frame = +3
Query: 255 RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 365
R+PRV+GGGT R+GQGAF N CR GRM PTK RRW
Sbjct: 72 RVPRVKGGGTRRAGQGAFANFCRKGRMAHPTKTHRRW 108
Score = 55.6 bits (128), Expect = 1e-06
Identities = 28/53 (52%), Positives = 35/53 (66%)
Frame = +1
Query: 517 KTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKGS 675
KTK AV LR L ++ +V KS+ +R GKGKMRNRR QRKG LI+ + S
Sbjct: 160 KTKDAVEILRNLNMTEELKRVEKSRGVRCGKGKMRNRRYTQRKGILIVHGESS 212
Score = 35.1 bits (77), Expect = 1.7
Identities = 14/37 (37%), Positives = 26/37 (70%)
Frame = +2
Query: 410 SVAATGVPALVQARGHIIEKIPELPLVVADKVQRSTR 520
+VAA+ +LV+ARGH I + LP++V+D + ++ +
Sbjct: 124 AVAASAQASLVEARGHRISDVKMLPIIVSDDIAKARK 160
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 61.3 bits (142), Expect = 2e-08
Identities = 26/36 (72%), Positives = 33/36 (91%)
Frame = +1
Query: 517 KTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 624
KT++AV+ L++LKAW+DI KVY SQR+RAGKGKMRN
Sbjct: 26 KTEEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 61
Score = 32.7 bits (71), Expect = 9.1
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = +2
Query: 446 ARGHIIEKIPELPLVVADKVQ 508
++GH I ++PELPLVV DKV+
Sbjct: 2 SKGHRIGEVPELPLVVEDKVE 22
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 59.7 bits (138), Expect = 7e-08
Identities = 29/73 (39%), Positives = 49/73 (67%)
Frame = +1
Query: 37 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 216
++R V+V +++ + + + LP VF PIR ++V +V+V+++KN++QP+ AG +
Sbjct: 1 MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAGKK 58
Query: 217 TSAESWGTGRAVA 255
SA SWGTGRA A
Sbjct: 59 VSAISWGTGRAKA 71
Score = 52.0 bits (119), Expect = 1e-05
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +3
Query: 258 IPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 365
+PRV G G++R+GQGA+ N CRGG F P RRW
Sbjct: 73 VPRVNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRW 108
Score = 48.4 bits (110), Expect = 2e-04
Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Frame = +2
Query: 368 PSRQPPTAESGLGGSVAATGVPALVQARGHIIEKIPELPLVVADKVQRSTRP-NRLSSS* 544
PSRQ A + ++AAT V LVQARGH++ ++ E+P+VV D VQ R + +
Sbjct: 113 PSRQRKFA---IASAIAATAVVPLVQARGHVLGEVKEVPIVVVDAVQEIKRTRDAVELLK 169
Query: 545 GASRHGLISLRCTSLSVFVLVRVKCAXXXXXXXXXXXXXXXXXQGLTRAFRNIPG 709
+G + R SV + K +G+ +AFRNIPG
Sbjct: 170 KVGVYGDVQ-RVLDGSVHRSSKGKFRRAAYKTKKGPLVIYNEDKGIVKAFRNIPG 223
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/57 (35%), Positives = 33/57 (57%)
Frame = +1
Query: 508 EINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKGSG 678
EI +T+ AV L+++ + D+ +V R+ KGK R +KGPL+I+N+ G
Sbjct: 157 EIKRTRDAVELLKKVGVYGDVQRVLDGSVHRSSKGKFRRAAYKTKKGPLVIYNEDKG 213
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 56.0 bits (129), Expect = 9e-07
Identities = 28/70 (40%), Positives = 40/70 (57%)
Frame = +1
Query: 46 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA 225
P+ ++ E+ +TV+ LP F+ P+R DL+ ++ N RQPY AG +TSA
Sbjct: 4 PVFNLEGEEVDTVE-----LPSFFEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFRTSA 58
Query: 226 ESWGTGRAVA 255
ESWG G VA
Sbjct: 59 ESWGAGHGVA 68
Score = 49.6 bits (113), Expect = 7e-05
Identities = 21/65 (32%), Positives = 37/65 (56%)
Frame = +1
Query: 511 INKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKGSGSDSR 690
+NK ++ F + + W+D+ + ++R+RAGKGK R RR ++ K LI+ ++ G
Sbjct: 155 LNKAREVREFFKSVGLWADVERAKSNRRIRAGKGKRRGRRYVKPKSVLIVVDEDEGIKLG 214
Query: 691 LPQHP 705
HP
Sbjct: 215 ARNHP 219
Score = 41.1 bits (92), Expect = 0.026
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +2
Query: 395 SGLGGSVAATGVPALVQARGHIIEKIPELPLVVADKVQ 508
+ L ++AAT P V+ RGH+I+ +P LP+VV D+++
Sbjct: 116 AALRSALAATAKPEFVKERGHVIDDVPHLPVVVVDELK 153
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 54.0 bits (124), Expect = 3e-06
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +3
Query: 255 RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 368
RIPR++G GT ++GQGA NMCRGGR+F ++W+
Sbjct: 76 RIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWN 113
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 52.8 bits (121), Expect = 8e-06
Identities = 24/51 (47%), Positives = 32/51 (62%)
Frame = +1
Query: 511 INKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIF 663
+ KT A+ L++ A+ D K S + GKGKMRNRR I RKGPLI++
Sbjct: 24 VEKTSAAIDILKQFDAYLDTEKAKDSHAIHPGKGKMRNRRYISRKGPLIVY 74
Score = 33.9 bits (74), Expect = 3.9
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2
Query: 446 ARGHIIEKIPELPLVVADKVQ 508
ARGH IE +PELPLV+ D +
Sbjct: 2 ARGHRIESVPELPLVIGDSAE 22
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 49.2 bits (112), Expect = 1e-04
Identities = 24/55 (43%), Positives = 33/55 (60%)
Frame = +1
Query: 511 INKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKGS 675
INKTK A+ L+ L + DI + + + +RAG+GKMR RR Q K LI+ S
Sbjct: 152 INKTKDAIALLKNLGVYEDIERSREGKHIRAGRGKMRGRRYKQPKSVLIVARNSS 206
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/49 (42%), Positives = 33/49 (67%)
Frame = +1
Query: 517 KTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIF 663
KTK A+ FL+R A+ D+ KV ++ +RAG K R ++ RKGPL+++
Sbjct: 10 KTKDALNFLKRFGAFEDVQKVVSTKTIRAGVSKSRGKKYRVRKGPLVVY 58
>UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L4P -
Nanoarchaeum equitans
Length = 268
Score = 47.2 bits (107), Expect = 4e-04
Identities = 24/53 (45%), Positives = 35/53 (66%)
Frame = +1
Query: 508 EINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFN 666
++ KTK+ L +L ++ +VY+ +R RAGKGK R R I+RKGPLI+ N
Sbjct: 161 QLRKTKEIQQLLLKLGLEKELERVYEIKR-RAGKGKRRGRAYIERKGPLIVVN 212
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 46.4 bits (105), Expect = 7e-04
Identities = 19/62 (30%), Positives = 35/62 (56%)
Frame = +1
Query: 493 SRQSPEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKG 672
S + + +TK R + ++D+ + + +R RAG+GKMR RR +++K L++ K
Sbjct: 142 SNELESVKRTKDVAEVFRAIGVYADVERAKERKRYRAGRGKMRGRRYVKKKSVLLVVGKD 201
Query: 673 SG 678
G
Sbjct: 202 DG 203
Score = 39.1 bits (87), Expect = 0.10
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 103 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVA 255
LP VF RPD++ +++ + RQPY + +G S E+WG G A
Sbjct: 18 LPEVFAEEFRPDIIKRAVLALQSHRRQPYGPNPLSGVDYSWENWGPGHGYA 68
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 46.0 bits (104), Expect = 0.001
Identities = 24/68 (35%), Positives = 38/68 (55%)
Frame = +1
Query: 52 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 231
++VYS K + + LP +F+ RPD++ +SM QP+ AG +T+AES
Sbjct: 4 INVYSLKGDITEEIE--LPEIFEEEYRPDVIKRAVISMQTARIQPWGTDPMAGKRTTAES 61
Query: 232 WGTGRAVA 255
+G+GR A
Sbjct: 62 FGSGRGAA 69
Score = 40.7 bits (91), Expect = 0.034
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +1
Query: 511 INKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKGSG 678
+ TK+ + L DI++ K +++++GKGK+R R+ KGPL++ G
Sbjct: 151 VKTTKETREIFKDLGIMDDIVRAKKGRKIKSGKGKLRGRKYRTPKGPLVVVGNDRG 206
Score = 32.7 bits (71), Expect = 9.1
Identities = 13/42 (30%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Frame = +2
Query: 410 SVAATGVPALVQARGHIIEKIPELPLVVADKVQ--RSTRPNR 529
++AAT LV+ RGH + ++ ++P V+ D+++ ++T+ R
Sbjct: 117 AIAATANKELVEQRGHQVSELEQIPFVIDDEIETVKTTKETR 158
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 44.4 bits (100), Expect = 0.003
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +1
Query: 451 RTHY*KDSRASP-GCSRQSPEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 627
R H KDS P + + T + FL+++ + D+ +V + R+RAGKGKMR R
Sbjct: 136 RGHVFKDSVRFPIVVTDDIVNLKTTSEVEEFLKKIGVYDDVERVKERIRIRAGKGKMRGR 195
Query: 628 RRIQRKGPLII 660
+ + GPLII
Sbjct: 196 KYKEPIGPLII 206
Score = 41.1 bits (92), Expect = 0.026
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +1
Query: 103 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVA 255
LP +F P+R DL+ V ++ +S QP AG +TSAES+G +A
Sbjct: 25 LPIIFSFPVRKDLIRRVFIAEFTHSLQPKGRDPNAGKRTSAESFGINLGMA 75
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 43.2 bits (97), Expect = 0.006
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +1
Query: 508 EINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLII 660
+IN+ K+A L W D+ + + ++RAGKGKMR RR + K L++
Sbjct: 177 KINRAKEAKKLFEALGLWPDVERAAEGVKIRAGKGKMRGRRYKEPKSVLVV 227
Score = 42.3 bits (95), Expect = 0.011
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Frame = +2
Query: 410 SVAATGVPALVQARGHIIEKIPELPLVV---ADKVQRSTRPNRLSSS*G 547
++AAT + V ARGH++EK+P LP+VV A+K+ R+ +L + G
Sbjct: 144 AIAATAYRSWVAARGHVVEKVPSLPVVVVGDAEKINRAKEAKKLFEALG 192
Score = 39.1 bits (87), Expect = 0.10
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +1
Query: 106 PFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVA 255
P F PIRPDL+ ++S QP V + AG + S ES+G G +A
Sbjct: 45 PLHFLEPIRPDLIRRAYLSALSARFQPKGVYEGAGKEHSCESFGVGLGIA 94
>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 246
Score = 42.7 bits (96), Expect = 0.009
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = +1
Query: 103 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVA 255
LP VF+ P+R DL+ + N +Q Y + AG +T AES+G+GR A
Sbjct: 18 LPDVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQA 68
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 41.5 bits (93), Expect = 0.020
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +2
Query: 278 WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQP 382
W VR C+R HV WW +VR E L LAP QP
Sbjct: 134 WNEHVRRRCVRQHVPWWPHVRADEDLPPLAPQDQP 168
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 40.3 bits (90), Expect = 0.045
Identities = 25/69 (36%), Positives = 33/69 (47%)
Frame = +1
Query: 49 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAE 228
+V VY E+ LP +F+ P+R DL+ +S QP AG +TSA
Sbjct: 15 IVPVYDERGGEKDSVV--LPQIFRFPVRKDLIRRAFLSEFTARLQPKGRDPMAGKRTSAV 72
Query: 229 SWGTGRAVA 255
S G GR VA
Sbjct: 73 SLGVGRGVA 81
Score = 35.5 bits (78), Expect = 1.3
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +1
Query: 508 EINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLII 660
+I+ ++A L + + D+L+ + +R AGKGKMR RR K L +
Sbjct: 162 KISTAREARSLLESVGVYEDVLRAKEGKRYNAGKGKMRGRRYKVPKSVLFV 212
>UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_113, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 145
Score = 36.7 bits (81), Expect = 0.56
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2
Query: 413 VAATGVPALVQARGHIIEKIPELPLVVADKVQ 508
+A + V +LV ARGH IE + ELPLV+ D +
Sbjct: 13 IATSAVLSLVMARGHRIESVLELPLVIGDSTK 44
>UniRef50_Q9VJJ9 Cluster: CG31738-PB, isoform B; n=3; Drosophila
melanogaster|Rep: CG31738-PB, isoform B - Drosophila
melanogaster (Fruit fly)
Length = 1700
Score = 36.7 bits (81), Expect = 0.56
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = -2
Query: 342 GRTYVHHDTCYRRHPDRTYEYHHHGHAEFGDSTSSTP*FSTGLVTSLLAHAVGLPRVL 169
G T HH + H + HH H G S+S++ + ++S LA A GL R++
Sbjct: 1601 GATDSHHQHQHHMHHSHHMHHAHHPHTGMGGSSSNSSSSTAAAISSSLAQAGGLRRIV 1658
>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
organisms|Rep: Ribosomal protein L4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 304
Score = 36.3 bits (80), Expect = 0.74
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 7/67 (10%)
Frame = +1
Query: 76 ETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK-------EAGHQTSAESW 234
E G A LP VF IR DL+ ++ N RQ Y + +AG + S E W
Sbjct: 41 EAKNGKAVTLPDVFSGEIREDLIRRAVLASRANRRQSYGHREHDGKRKPQAGMKHSVEWW 100
Query: 235 GTGRAVA 255
G GR V+
Sbjct: 101 GKGRGVS 107
>UniRef50_Q6ZS86 Cluster: Glycerol kinase 5; n=26; Euteleostomi|Rep:
Glycerol kinase 5 - Homo sapiens (Human)
Length = 529
Score = 35.5 bits (78), Expect = 1.3
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Frame = -2
Query: 627 TVAHFTLTSTKT-LRLVH-LKDIRPCLEAPQEDDSLFGLVDLWTLSATTRGS 478
T + FT T+ +T LRLV L+++ +A +E++ FG +D W L T+GS
Sbjct: 157 TASLFTFTTQQTSLRLVWILQNLTEVQKAVEEENCCFGTIDTWLLYKLTKGS 208
>UniRef50_Q7F729 Cluster: OSJNBa0004B13.22 protein; n=2; Oryza
sativa (japonica cultivar-group)|Rep: OSJNBa0004B13.22
protein - Oryza sativa subsp. japonica (Rice)
Length = 248
Score = 35.1 bits (77), Expect = 1.7
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +1
Query: 361 VGTVASTSDSGERPWRQRCCYRRPSARSG*RTHY*KDSRASPGCSRQSPEI 513
+GT AS G+RPW R C+ R RS T + A P R +P +
Sbjct: 106 IGTAASIFSGGQRPWACRSCHLRGGCRSSATTR--RRVTAEPRALRSTPPV 154
>UniRef50_Q2J5X5 Cluster: Putative uncharacterized protein; n=3;
Frankia|Rep: Putative uncharacterized protein - Frankia
sp. (strain CcI3)
Length = 216
Score = 34.7 bits (76), Expect = 2.3
Identities = 20/45 (44%), Positives = 24/45 (53%)
Frame = +3
Query: 228 IMGYWTCCRRIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRR 362
+ G W CRR GGT +G+G GNM G PT+PWRR
Sbjct: 7 VNGGWFGCRRGTEKLYGGTC-AGRGG-GNMTAGPLGRVPTRPWRR 49
>UniRef50_A5P4M3 Cluster: Putative uncharacterized protein
precursor; n=1; Methylobacterium sp. 4-46|Rep: Putative
uncharacterized protein precursor - Methylobacterium sp.
4-46
Length = 1265
Score = 34.3 bits (75), Expect = 3.0
Identities = 28/70 (40%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 356 AALAPSRQPPTAESGLGGSVAATGVPALVQARGHIIEKIPELPLVV-ADKVQRSTRPNRL 532
AA+AP+R P +G G A G PA QAR ++PE V AD R P R
Sbjct: 503 AAVAPARHPGRGGAGAG----AAGGPAPAQARPGAARRLPEGDGVQHADPAHRLAAPRR- 557
Query: 533 SSS*GASRHG 562
S GA+R G
Sbjct: 558 -SGGGAARSG 566
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 34.3 bits (75), Expect = 3.0
Identities = 16/44 (36%), Positives = 29/44 (65%)
Frame = +2
Query: 401 LGGSVAATGVPALVQARGHIIEKIPELPLVVADKVQRSTRPNRL 532
L ++AAT + V RGHII+ I ELP+V++D ++ ++ + +
Sbjct: 120 LCSAIAATASKSTVAGRGHIIDGI-ELPIVISDDIESVSKASEV 162
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 33.9 bits (74), Expect = 3.9
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +3
Query: 255 RIPRVRGGGTHRSGQGAFGNMCRGG 329
R PR GGG HR GA G + RGG
Sbjct: 202 RRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_UPI000059FF73 Cluster: PREDICTED: hypothetical protein
XP_849920; n=1; Canis lupus familiaris|Rep: PREDICTED:
hypothetical protein XP_849920 - Canis familiaris
Length = 384
Score = 33.5 bits (73), Expect = 5.2
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 237 YWTCCRRIPRVRGGGTHRS 293
+WTCC R PR G G+HRS
Sbjct: 18 HWTCCHRHPRRPGEGSHRS 36
>UniRef50_Q2T2X7 Cluster: Transcriptional regulator, GntR family;
n=11; pseudomallei group|Rep: Transcriptional regulator,
GntR family - Burkholderia thailandensis (strain E264 /
ATCC 700388 / DSM 13276 /CIP 106301)
Length = 439
Score = 33.5 bits (73), Expect = 5.2
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Frame = +1
Query: 484 PGCSRQSP-EINKTKQAVIFLR-RLKAWSDILKVYKSQRLRAGKGKMRNRRRI 636
PGC RQ P + N + +F R RL S + +V+ + R+R+ + +R++RRI
Sbjct: 124 PGCLRQWPCDRNTLRSRFLFPRQRLSRPSPLSRVFVASRMRSRRRALRSQRRI 176
>UniRef50_UPI0000E1F6E9 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 539
Score = 33.1 bits (72), Expect = 6.9
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +2
Query: 335 VRPHEALAALAPSRQPPTAESGLGGSVAATGVPALVQARGHIIEKIP 475
+RP + ALAP+ +PP S G A G P L+ A G +++ +P
Sbjct: 151 LRPSSRIRALAPAPRPPLLPSAQG---APHGQPTLICAPGSLLQPLP 194
>UniRef50_Q1AWB5 Cluster: Carboxylate-amine ligase Rxyl_1350; n=1;
Rubrobacter xylanophilus DSM 9941|Rep: Carboxylate-amine
ligase Rxyl_1350 - Rubrobacter xylanophilus (strain DSM
9941 / NBRC 16129)
Length = 363
Score = 33.1 bits (72), Expect = 6.9
Identities = 23/77 (29%), Positives = 36/77 (46%)
Frame = +2
Query: 290 VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGLGGSVAATGVPALVQARGHIIEK 469
VR+G +R + W VRPH L + + P A++ G + A + + A E
Sbjct: 211 VRAGSIRDYTFCWWDVRPHPKLGTV--ELRAPDAQTDPGRTAALAALCQCLAAAAEEFE- 267
Query: 470 IPELPLVVADKVQRSTR 520
PE PL+ + R+TR
Sbjct: 268 -PEDPLLTEENKWRATR 283
>UniRef50_UPI000058888F Cluster: PREDICTED: similar to
ENSANGP00000014064; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000014064
- Strongylocentrotus purpuratus
Length = 300
Score = 32.7 bits (71), Expect = 9.1
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 324 HDTCYRRHPDRTYEYHHHGHAEFGDS 247
H+ YR H + +HHHGH+ G S
Sbjct: 106 HERAYRPHSNSDGHHHHHGHSHHGHS 131
>UniRef50_Q0S4B0 Cluster: Putative uncharacterized protein; n=2;
Rhodococcus sp. RHA1|Rep: Putative uncharacterized
protein - Rhodococcus sp. (strain RHA1)
Length = 449
Score = 32.7 bits (71), Expect = 9.1
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 368 PSRQPPTAESGLGGSVAATGVPALVQARGHIIEKIP 475
P+ P + +GG A GVPAL+ G +I +P
Sbjct: 114 PAMSAPDVGTAIGGLAALPGVPALISGLGSLIPSVP 149
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 694,094,187
Number of Sequences: 1657284
Number of extensions: 14251388
Number of successful extensions: 47423
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 44105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47220
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56611575523
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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