Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20351
         (709 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domai...    27   0.44 
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    25   2.3  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    25   3.1  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   7.1  
CR954257-4|CAJ14155.1|  196|Anopheles gambiae predicted protein ...    23   9.4  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    23   9.4  

>DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 168

 Score = 27.5 bits (58), Expect = 0.44
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = +1

Query: 466 KDSRASPGCSRQSPEINKTKQAVIFLR 546
           K+ +  P CS ++  ++KT  A++F+R
Sbjct: 81  KEGKCIPKCSNENMPLSKTSTAILFVR 107


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -2

Query: 276 HHGHAEFGDSTSSTP*FSTGLVTSLL 199
           HHG   FG+ T+S   FS  L   LL
Sbjct: 394 HHGMGMFGNQTTSPDAFSINLAGVLL 419


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 12/31 (38%), Positives = 13/31 (41%)
 Frame = -2

Query: 330 VHHDTCYRRHPDRTYEYHHHGHAEFGDSTSS 238
           VH     RRH  R    HH    E GD  S+
Sbjct: 40  VHIPGSSRRHSQRRRHKHHQASRENGDKGST 70


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -2

Query: 309 RRHPDRTYEYHHHGH 265
           ++HP  +  +HHH H
Sbjct: 175 QQHPGHSQHHHHHHH 189


>CR954257-4|CAJ14155.1|  196|Anopheles gambiae predicted protein
           protein.
          Length = 196

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -3

Query: 527 CLVLLISGLCRL 492
           CLVLLI+G C L
Sbjct: 9   CLVLLIAGCCAL 20


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 78  DGAGCSQAPPVRVQGAHPSGPG 143
           DG     +PP+ V G+  S PG
Sbjct: 153 DGLHSIPSPPITVSGSDMSSPG 174


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 700,916
Number of Sequences: 2352
Number of extensions: 13632
Number of successful extensions: 48
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)