Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20351
         (709 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X13382-1|CAA31759.1|  407|Drosophila melanogaster protein ( Dros...   107   2e-23
BT025959-1|ABG02203.1|  233|Drosophila melanogaster IP15855p pro...   107   2e-23
AY069485-1|AAL39630.1|  401|Drosophila melanogaster LD21756p pro...   107   2e-23
AE014297-4196|AAG22173.1|  401|Drosophila melanogaster CG5502-PA...   107   2e-23
X06881-1|CAA29998.1|  123|Drosophila melanogaster protein ( Dros...    87   2e-17
BT023938-1|ABB36442.1| 1103|Drosophila melanogaster RE04201p pro...    37   0.031
AY094813-1|AAM11166.1| 1413|Drosophila melanogaster LD30602p pro...    37   0.031
AE014134-2739|AAF53547.2| 1413|Drosophila melanogaster CG31738-P...    37   0.031
AE014134-2738|AAF53546.3| 1700|Drosophila melanogaster CG31738-P...    37   0.031
BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p pro...    29   4.7  
AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-P...    29   4.7  

>X13382-1|CAA31759.1|  407|Drosophila melanogaster protein (
           Drosophila melanogastermRNA for put. ribosomal protein
           L1. ).
          Length = 407

 Score =  107 bits (256), Expect = 2e-23
 Identities = 52/77 (67%), Positives = 61/77 (79%)
 Frame = +1

Query: 25  MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 204
           MSL  ARPLVSVY+EK+E  +     LP VFKAPIRPD+VN+VH  + +N+RQ Y VS+ 
Sbjct: 1   MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60

Query: 205 AGHQTSAESWGTGRAVA 255
           AGHQTSAESWGTGRAVA
Sbjct: 61  AGHQTSAESWGTGRAVA 77



 Score = 90.6 bits (215), Expect = 2e-18
 Identities = 40/62 (64%), Positives = 51/62 (82%)
 Frame = +1

Query: 493 SRQSPEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKG 672
           S +  ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR+RRRI R+GPL++++K 
Sbjct: 158 SDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRGPLVVYDKD 217

Query: 673 SG 678
            G
Sbjct: 218 EG 219



 Score = 87.0 bits (206), Expect = 2e-17
 Identities = 36/38 (94%), Positives = 37/38 (97%)
 Frame = +3

Query: 255 RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 368
           RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 78  RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 115



 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 21/37 (56%), Positives = 32/37 (86%)
 Frame = +2

Query: 401 LGGSVAATGVPALVQARGHIIEKIPELPLVVADKVQR 511
           L  ++AA+GVPALVQ++GH+I+ + E PLVV+D+VQ+
Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQK 163


>BT025959-1|ABG02203.1|  233|Drosophila melanogaster IP15855p
           protein.
          Length = 233

 Score =  107 bits (256), Expect = 2e-23
 Identities = 52/77 (67%), Positives = 61/77 (79%)
 Frame = +1

Query: 25  MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 204
           MSL  ARPLVSVY+EK+E  +     LP VFKAPIRPD+VN+VH  + +N+RQ Y VS+ 
Sbjct: 1   MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60

Query: 205 AGHQTSAESWGTGRAVA 255
           AGHQTSAESWGTGRAVA
Sbjct: 61  AGHQTSAESWGTGRAVA 77



 Score = 90.6 bits (215), Expect = 2e-18
 Identities = 40/62 (64%), Positives = 51/62 (82%)
 Frame = +1

Query: 493 SRQSPEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKG 672
           S +  ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR+RRRI R+GPL++++K 
Sbjct: 158 SDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRGPLVVYDKD 217

Query: 673 SG 678
            G
Sbjct: 218 EG 219



 Score = 87.0 bits (206), Expect = 2e-17
 Identities = 36/38 (94%), Positives = 37/38 (97%)
 Frame = +3

Query: 255 RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 368
           RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 78  RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 115



 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 21/37 (56%), Positives = 32/37 (86%)
 Frame = +2

Query: 401 LGGSVAATGVPALVQARGHIIEKIPELPLVVADKVQR 511
           L  ++AA+GVPALVQ++GH+I+ + E PLVV+D+VQ+
Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQK 163


>AY069485-1|AAL39630.1|  401|Drosophila melanogaster LD21756p
           protein.
          Length = 401

 Score =  107 bits (256), Expect = 2e-23
 Identities = 52/77 (67%), Positives = 61/77 (79%)
 Frame = +1

Query: 25  MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 204
           MSL  ARPLVSVY+EK+E  +     LP VFKAPIRPD+VN+VH  + +N+RQ Y VS+ 
Sbjct: 1   MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60

Query: 205 AGHQTSAESWGTGRAVA 255
           AGHQTSAESWGTGRAVA
Sbjct: 61  AGHQTSAESWGTGRAVA 77



 Score = 90.6 bits (215), Expect = 2e-18
 Identities = 40/62 (64%), Positives = 51/62 (82%)
 Frame = +1

Query: 493 SRQSPEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKG 672
           S +  ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR+RRRI R+GPL++++K 
Sbjct: 158 SDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRGPLVVYDKD 217

Query: 673 SG 678
            G
Sbjct: 218 EG 219



 Score = 87.0 bits (206), Expect = 2e-17
 Identities = 36/38 (94%), Positives = 37/38 (97%)
 Frame = +3

Query: 255 RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 368
           RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 78  RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 115



 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 21/37 (56%), Positives = 32/37 (86%)
 Frame = +2

Query: 401 LGGSVAATGVPALVQARGHIIEKIPELPLVVADKVQR 511
           L  ++AA+GVPALVQ++GH+I+ + E PLVV+D+VQ+
Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQK 163


>AE014297-4196|AAG22173.1|  401|Drosophila melanogaster CG5502-PA
           protein.
          Length = 401

 Score =  107 bits (256), Expect = 2e-23
 Identities = 52/77 (67%), Positives = 61/77 (79%)
 Frame = +1

Query: 25  MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 204
           MSL  ARPLVSVY+EK+E  +     LP VFKAPIRPD+VN+VH  + +N+RQ Y VS+ 
Sbjct: 1   MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60

Query: 205 AGHQTSAESWGTGRAVA 255
           AGHQTSAESWGTGRAVA
Sbjct: 61  AGHQTSAESWGTGRAVA 77



 Score = 90.6 bits (215), Expect = 2e-18
 Identities = 40/62 (64%), Positives = 51/62 (82%)
 Frame = +1

Query: 493 SRQSPEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKG 672
           S +  ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR+RRRI R+GPL++++K 
Sbjct: 158 SDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRGPLVVYDKD 217

Query: 673 SG 678
            G
Sbjct: 218 EG 219



 Score = 87.0 bits (206), Expect = 2e-17
 Identities = 36/38 (94%), Positives = 37/38 (97%)
 Frame = +3

Query: 255 RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 368
           RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 78  RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 115



 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 21/37 (56%), Positives = 32/37 (86%)
 Frame = +2

Query: 401 LGGSVAATGVPALVQARGHIIEKIPELPLVVADKVQR 511
           L  ++AA+GVPALVQ++GH+I+ + E PLVV+D+VQ+
Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQK 163


>X06881-1|CAA29998.1|  123|Drosophila melanogaster protein (
           Drosophila gene forribosomal protein L1 fragment. ).
          Length = 123

 Score = 87.0 bits (206), Expect = 2e-17
 Identities = 36/38 (94%), Positives = 37/38 (97%)
 Frame = +3

Query: 255 RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 368
           RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 16  RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 53



 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 21/37 (56%), Positives = 32/37 (86%)
 Frame = +2

Query: 401 LGGSVAATGVPALVQARGHIIEKIPELPLVVADKVQR 511
           L  ++AA+GVPALVQ++GH+I+ + E PLVV+D+VQ+
Sbjct: 65  LVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQK 101



 Score = 40.3 bits (90), Expect = 0.003
 Identities = 18/28 (64%), Positives = 22/28 (78%)
 Frame = +1

Query: 493 SRQSPEINKTKQAVIFLRRLKAWSDILK 576
           S +  ++ KTKQAVIFLRRLK W+DI K
Sbjct: 96  SDEVQKVQKTKQAVIFLRRLKIWADIQK 123



 Score = 36.3 bits (80), Expect = 0.041
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = +1

Query: 211 HQTSAESWGTGRAVA 255
           HQTSAESWGTGRAVA
Sbjct: 1   HQTSAESWGTGRAVA 15


>BT023938-1|ABB36442.1| 1103|Drosophila melanogaster RE04201p protein.
          Length = 1103

 Score = 36.7 bits (81), Expect = 0.031
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = -2

Query: 342  GRTYVHHDTCYRRHPDRTYEYHHHGHAEFGDSTSSTP*FSTGLVTSLLAHAVGLPRVL 169
            G T  HH   +  H      + HH H   G S+S++   +   ++S LA A GL R++
Sbjct: 1004 GATDSHHQHQHHMHHSHHMHHAHHPHTGMGGSSSNSSSSTAAAISSSLAQAGGLRRIV 1061


>AY094813-1|AAM11166.1| 1413|Drosophila melanogaster LD30602p protein.
          Length = 1413

 Score = 36.7 bits (81), Expect = 0.031
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = -2

Query: 342  GRTYVHHDTCYRRHPDRTYEYHHHGHAEFGDSTSSTP*FSTGLVTSLLAHAVGLPRVL 169
            G T  HH   +  H      + HH H   G S+S++   +   ++S LA A GL R++
Sbjct: 1314 GATDSHHQHQHHMHHSHHMHHAHHPHTGMGGSSSNSSSSTAAAISSSLAQAGGLRRIV 1371


>AE014134-2739|AAF53547.2| 1413|Drosophila melanogaster CG31738-PA,
            isoform A protein.
          Length = 1413

 Score = 36.7 bits (81), Expect = 0.031
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = -2

Query: 342  GRTYVHHDTCYRRHPDRTYEYHHHGHAEFGDSTSSTP*FSTGLVTSLLAHAVGLPRVL 169
            G T  HH   +  H      + HH H   G S+S++   +   ++S LA A GL R++
Sbjct: 1314 GATDSHHQHQHHMHHSHHMHHAHHPHTGMGGSSSNSSSSTAAAISSSLAQAGGLRRIV 1371


>AE014134-2738|AAF53546.3| 1700|Drosophila melanogaster CG31738-PB,
            isoform B protein.
          Length = 1700

 Score = 36.7 bits (81), Expect = 0.031
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = -2

Query: 342  GRTYVHHDTCYRRHPDRTYEYHHHGHAEFGDSTSSTP*FSTGLVTSLLAHAVGLPRVL 169
            G T  HH   +  H      + HH H   G S+S++   +   ++S LA A GL R++
Sbjct: 1601 GATDSHHQHQHHMHHSHHMHHAHHPHTGMGGSSSNSSSSTAAAISSSLAQAGGLRRIV 1658


>BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p
           protein.
          Length = 1953

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +3

Query: 30  SIGSPTFSVGVLREE*DGAGCSQAPPVRVQG--AHPSGPG 143
           ++GSP ++VG       G G S APP  V    AH +G G
Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGVVAPPAHLAGIG 326


>AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-PC
           protein.
          Length = 2528

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +3

Query: 30  SIGSPTFSVGVLREE*DGAGCSQAPPVRVQG--AHPSGPG 143
           ++GSP ++VG       G G S APP  V    AH +G G
Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGVVAPPAHLAGIG 326


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,707,759
Number of Sequences: 53049
Number of extensions: 690847
Number of successful extensions: 3532
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3496
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)