Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20344
(795 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X75913-1|CAA53512.1| 282|Homo sapiens gCIq-R protein. 30 8.4
M69039-1|AAA73055.1| 278|Homo sapiens protein ( Human pre-mRNA ... 30 8.4
L04636-1|AAA16315.1| 282|Homo sapiens splicing factor protein. 30 8.4
DQ372108-1|ABC79624.1| 282|Homo sapiens complement component 1,... 30 8.4
BT019899-1|AAV38702.1| 282|Homo sapiens complement component 1,... 30 8.4
BT019898-1|AAV38701.1| 282|Homo sapiens complement component 1,... 30 8.4
BC013731-1|AAH13731.1| 282|Homo sapiens complement component 1,... 30 8.4
BC000435-1|AAH00435.1| 282|Homo sapiens complement component 1,... 30 8.4
AL021937-5|CAB38257.1| 69|Homo sapiens ret finger protein-like... 30 8.4
AF338439-1|AAK26580.1| 282|Homo sapiens gC1qR/p32 protein. 30 8.4
AF275902-1|AAF78763.1| 197|Homo sapiens hyaluronan-binding prot... 30 8.4
>X75913-1|CAA53512.1| 282|Homo sapiens gCIq-R protein.
Length = 282
Score = 30.3 bits (65), Expect = 8.4
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +1
Query: 373 IDMVARGEFRKVLIYQAHMKSEEVGPEDEIQAD 471
++++ + +K L+ H +EVG EDE ++D
Sbjct: 170 VEVIKNDDGKKALVLDCHYPEDEVGQEDEAESD 202
>M69039-1|AAA73055.1| 278|Homo sapiens protein ( Human pre-mRNA
splicing factor SF2p32, complete sequence. ).
Length = 278
Score = 30.3 bits (65), Expect = 8.4
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +1
Query: 373 IDMVARGEFRKVLIYQAHMKSEEVGPEDEIQAD 471
++++ + +K L+ H +EVG EDE ++D
Sbjct: 166 VEVIKNDDGKKALVLDCHYPEDEVGQEDEAESD 198
>L04636-1|AAA16315.1| 282|Homo sapiens splicing factor protein.
Length = 282
Score = 30.3 bits (65), Expect = 8.4
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +1
Query: 373 IDMVARGEFRKVLIYQAHMKSEEVGPEDEIQAD 471
++++ + +K L+ H +EVG EDE ++D
Sbjct: 170 VEVIKNDDGKKALVLDCHYPEDEVGQEDEAESD 202
>DQ372108-1|ABC79624.1| 282|Homo sapiens complement component 1, q
subcomponent binding protein protein.
Length = 282
Score = 30.3 bits (65), Expect = 8.4
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +1
Query: 373 IDMVARGEFRKVLIYQAHMKSEEVGPEDEIQAD 471
++++ + +K L+ H +EVG EDE ++D
Sbjct: 170 VEVIKNDDGKKALVLDCHYPEDEVGQEDEAESD 202
>BT019899-1|AAV38702.1| 282|Homo sapiens complement component 1, q
subcomponent binding protein protein.
Length = 282
Score = 30.3 bits (65), Expect = 8.4
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +1
Query: 373 IDMVARGEFRKVLIYQAHMKSEEVGPEDEIQAD 471
++++ + +K L+ H +EVG EDE ++D
Sbjct: 170 VEVIKNDDGKKALVLDCHYPEDEVGQEDEAESD 202
>BT019898-1|AAV38701.1| 282|Homo sapiens complement component 1, q
subcomponent binding protein protein.
Length = 282
Score = 30.3 bits (65), Expect = 8.4
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +1
Query: 373 IDMVARGEFRKVLIYQAHMKSEEVGPEDEIQAD 471
++++ + +K L+ H +EVG EDE ++D
Sbjct: 170 VEVIKNDDGKKALVLDCHYPEDEVGQEDEAESD 202
>BC013731-1|AAH13731.1| 282|Homo sapiens complement component 1, q
subcomponent binding protein protein.
Length = 282
Score = 30.3 bits (65), Expect = 8.4
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +1
Query: 373 IDMVARGEFRKVLIYQAHMKSEEVGPEDEIQAD 471
++++ + +K L+ H +EVG EDE ++D
Sbjct: 170 VEVIKNDDGKKALVLDCHYPEDEVGQEDEAESD 202
>BC000435-1|AAH00435.1| 282|Homo sapiens complement component 1, q
subcomponent binding protein protein.
Length = 282
Score = 30.3 bits (65), Expect = 8.4
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +1
Query: 373 IDMVARGEFRKVLIYQAHMKSEEVGPEDEIQAD 471
++++ + +K L+ H +EVG EDE ++D
Sbjct: 170 VEVIKNDDGKKALVLDCHYPEDEVGQEDEAESD 202
>AL021937-5|CAB38257.1| 69|Homo sapiens ret finger protein-like 3
antisense protein.
Length = 69
Score = 30.3 bits (65), Expect = 8.4
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 439 EVGPEDEIQADESEYLEEDPDFGATSH*NERSLN-QRYLLSPYRSKVNVADQ 591
+V PED+ + D E+ EDP F T ++N YL SP R+ +V +
Sbjct: 9 KVPPEDQWKVDSKEWASEDP-FSVTKVTPRNTVNVAAYLASPGRTGASVVPE 59
>AF338439-1|AAK26580.1| 282|Homo sapiens gC1qR/p32 protein.
Length = 282
Score = 30.3 bits (65), Expect = 8.4
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +1
Query: 373 IDMVARGEFRKVLIYQAHMKSEEVGPEDEIQAD 471
++++ + +K L+ H +EVG EDE ++D
Sbjct: 170 VEVIKNDDGKKALVLDCHYPEDEVGQEDEAESD 202
>AF275902-1|AAF78763.1| 197|Homo sapiens hyaluronan-binding protein
precursor protein.
Length = 197
Score = 30.3 bits (65), Expect = 8.4
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +1
Query: 373 IDMVARGEFRKVLIYQAHMKSEEVGPEDEIQAD 471
++++ + +K L+ H +EVG EDE ++D
Sbjct: 85 VEVIKNDDGKKALVLDCHYPEDEVGQEDEAESD 117
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,593,880
Number of Sequences: 237096
Number of extensions: 2178589
Number of successful extensions: 8951
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8932
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9757565650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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