Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20344
         (795 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66515-13|CAA91355.1|  184|Caenorhabditis elegans Hypothetical p...    31   1.3  
Z48638-11|CAA88572.1|  184|Caenorhabditis elegans Hypothetical p...    31   1.3  
Z74032-7|CAD54140.1|  330|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z50027-2|CAA90335.1|  188|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AL117203-9|CAB60420.3|  675|Caenorhabditis elegans Hypothetical ...    29   5.1  
Z32683-6|CAA83623.1|  728|Caenorhabditis elegans Hypothetical pr...    28   6.7  
U56963-2|AAB38119.2|  326|Caenorhabditis elegans Neuropeptide-li...    28   6.7  
U50193-1|AAA91247.2|  532|Caenorhabditis elegans Hypothetical pr...    28   6.7  

>Z66515-13|CAA91355.1|  184|Caenorhabditis elegans Hypothetical
           protein R53.8 protein.
          Length = 184

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 14/53 (26%), Positives = 28/53 (52%)
 Frame = +1

Query: 334 NFKKQVFECEKKFIDMVARGEFRKVLIYQAHMKSEEVGPEDEIQADESEYLEE 492
           NF+ +VFE E K + + A+GE +K +I     K      +  ++ ++ E  ++
Sbjct: 84  NFEAKVFEKESKIVKLKAKGELKKPVIVSIKDKKNGNSVKVMVKVEDQESADQ 136


>Z48638-11|CAA88572.1|  184|Caenorhabditis elegans Hypothetical
           protein R53.8 protein.
          Length = 184

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 14/53 (26%), Positives = 28/53 (52%)
 Frame = +1

Query: 334 NFKKQVFECEKKFIDMVARGEFRKVLIYQAHMKSEEVGPEDEIQADESEYLEE 492
           NF+ +VFE E K + + A+GE +K +I     K      +  ++ ++ E  ++
Sbjct: 84  NFEAKVFEKESKIVKLKAKGELKKPVIVSIKDKKNGNSVKVMVKVEDQESADQ 136


>Z74032-7|CAD54140.1|  330|Caenorhabditis elegans Hypothetical
           protein F35B12.9 protein.
          Length = 330

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 25/93 (26%), Positives = 36/93 (38%), Gaps = 10/93 (10%)
 Frame = -2

Query: 284 GPFGPSFICDY*YQSIPTAYPRKL----------HFHSSKCTQNLNLCNTLQKDSTGKGR 135
           GP GP    DY Y  +P   P K+          H + +    N N+ +  +KD     +
Sbjct: 184 GPMGPPPPLDYDYLFVPVEAPSKMESNNNGNNNVHVNVNHVQVNSNVLHVPEKDKKNIEK 243

Query: 134 DSPSPQYRQTPSLYHDSNITLTNKVPYVTMTVF 36
               P     PS YHDS  + T++  Y     F
Sbjct: 244 HEDMPPI--IPS-YHDSEPSSTSQFLYFNFNTF 273


>Z50027-2|CAA90335.1|  188|Caenorhabditis elegans Hypothetical
           protein C39B10.3 protein.
          Length = 188

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
 Frame = +2

Query: 113 DIVVKENPGLCRCCLSEGCYKDLGSEYTWMNENEVYADML----LECFDISNHK 262
           +I + +   L R C  EG  + LGS  T MNENE Y  +L    L+  D+ +H+
Sbjct: 9   EIQIMQKLTLERRCNYEG--QSLGSNKTDMNENEEYQQLLETKRLQDLDLQHHR 60


>AL117203-9|CAB60420.3|  675|Caenorhabditis elegans Hypothetical
           protein Y48C3A.12 protein.
          Length = 675

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +2

Query: 599 TRCQAREKEIKYGRQEN*TCSKDKNSPFEPSTDTPAP 709
           T  Q+   E   G   +   SK+ +SPF+ S+ TPAP
Sbjct: 184 TSIQSTTSETTPGHSSSRKPSKEDSSPFDASSATPAP 220


>Z32683-6|CAA83623.1|  728|Caenorhabditis elegans Hypothetical
           protein R07E5.8 protein.
          Length = 728

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +1

Query: 406 VLIYQAHMKSEEVGPEDEIQADESEYLEEDPDF 504
           V + Q H++++EV P+DE    +S  LEE P F
Sbjct: 259 VRLEQMHVETDEVAPKDEF---KSPVLEEKPKF 288


>U56963-2|AAB38119.2|  326|Caenorhabditis elegans Neuropeptide-like
           protein protein16 protein.
          Length = 326

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +1

Query: 436 EEVGPEDEIQADESEYLEEDP 498
           +E  PEDEIQ DE++ + E+P
Sbjct: 232 DEDEPEDEIQTDENDEVTEEP 252


>U50193-1|AAA91247.2|  532|Caenorhabditis elegans Hypothetical
           protein ZK328.4 protein.
          Length = 532

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +1

Query: 415 YQAHMKSEEVGPEDEIQADESEYLEEDPDFGATSH*NERSLNQR 546
           Y +   SEE   E+E   D+ EY E  P+  A    ++R   +R
Sbjct: 213 YISEESSEEESEEEEEDVDDEEYRESSPEVEAKISYSDRKQKKR 256


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,082,098
Number of Sequences: 27780
Number of extensions: 354016
Number of successful extensions: 1040
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1040
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)