Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20335
         (615 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L76433-1|AAC27659.1|  392|Anopheles gambiae tryptophan oxygenase...    27   0.48 
L76432-1|AAC27663.1|  392|Anopheles gambiae tryptophan oxygenase...    27   0.48 
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    24   4.5  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    24   4.5  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    23   7.8  

>L76433-1|AAC27659.1|  392|Anopheles gambiae tryptophan oxygenase
           protein.
          Length = 392

 Score = 27.1 bits (57), Expect = 0.48
 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = -2

Query: 296 LQKLRLQSKNLKIITKMPKN*KHNFIGQRRRFHC-STSIVFEKNCVRDLTSTTSVNQ 129
           L K+    + L +  K P + +H FI   + +      I+FE + +RDL ST  + +
Sbjct: 33  LDKVLSAQRMLSVEGKKPVHDEHLFIVTHQAYELWFKQIIFELDSIRDLFSTEHIEE 89


>L76432-1|AAC27663.1|  392|Anopheles gambiae tryptophan oxygenase
           protein.
          Length = 392

 Score = 27.1 bits (57), Expect = 0.48
 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = -2

Query: 296 LQKLRLQSKNLKIITKMPKN*KHNFIGQRRRFHC-STSIVFEKNCVRDLTSTTSVNQ 129
           L K+    + L +  K P + +H FI   + +      I+FE + +RDL ST  + +
Sbjct: 33  LDKVLSAQRMLSVEGKKPVHDEHLFIVTHQAYELWFKQIIFELDSIRDLFSTEHIEE 89


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +1

Query: 97  YDCRDEPTADCWFTEVVEVKSRTQFFSKTILV 192
           Y C  EP  D  FT  ++++ RT ++   ++V
Sbjct: 211 YQCCPEPYVDITFT--IQIRRRTLYYFFNLIV 240


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +1

Query: 97  YDCRDEPTADCWFTEVVEVKSRTQFFSKTILV 192
           Y C  EP  D  FT  ++++ RT ++   ++V
Sbjct: 211 YQCCPEPYVDITFT--IQIRRRTLYYFFNLIV 240


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -1

Query: 528 PFFLIYINSYNKHNSFVLPTHAHPSLLTMKCC 433
           P    Y+N+  + + F+L  H  P L  + CC
Sbjct: 564 PIIYCYMNARFR-SGFILVLHGVPGLQQLCCC 594


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 586,876
Number of Sequences: 2352
Number of extensions: 10953
Number of successful extensions: 26
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)