Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20334
         (463 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT012499-1|AAS93770.1|  347|Drosophila melanogaster GH09281p pro...    33   0.25 
AY089219-1|AAL89957.1|  340|Drosophila melanogaster AT01837p pro...    33   0.25 
AE014134-190|AAF51428.2|  347|Drosophila melanogaster CG4415-PA ...    33   0.25 
BT025087-1|ABE73258.1|  463|Drosophila melanogaster IP13921p pro...    29   4.0  

>BT012499-1|AAS93770.1|  347|Drosophila melanogaster GH09281p
           protein.
          Length = 347

 Score = 32.7 bits (71), Expect = 0.25
 Identities = 29/71 (40%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
 Frame = -3

Query: 317 EMRVRRDLQKLRLQS-KNLKIITKMPKN*KHNFIGQR---RRFHCSTSIVFEKNCVRDLT 150
           E + RR L KL L+  +N+  +T         +I Q    R  H ST I F + CV D T
Sbjct: 192 ERKARRILMKLDLKPMENVARVTMKKGKNILLYIDQPDVYRVAHSSTYIFFGEICVED-T 250

Query: 149 STTSVNQQSAV 117
           STTSV  Q+AV
Sbjct: 251 STTSVASQAAV 261


>AY089219-1|AAL89957.1|  340|Drosophila melanogaster AT01837p
           protein.
          Length = 340

 Score = 32.7 bits (71), Expect = 0.25
 Identities = 29/71 (40%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
 Frame = -3

Query: 317 EMRVRRDLQKLRLQS-KNLKIITKMPKN*KHNFIGQR---RRFHCSTSIVFEKNCVRDLT 150
           E + RR L KL L+  +N+  +T         +I Q    R  H ST I F + CV D T
Sbjct: 185 ERKARRILMKLDLKPMENVARVTMKKGKNILLYIDQPDVYRVAHSSTYIFFGEICVED-T 243

Query: 149 STTSVNQQSAV 117
           STTSV  Q+AV
Sbjct: 244 STTSVASQAAV 254


>AE014134-190|AAF51428.2|  347|Drosophila melanogaster CG4415-PA
           protein.
          Length = 347

 Score = 32.7 bits (71), Expect = 0.25
 Identities = 29/71 (40%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
 Frame = -3

Query: 317 EMRVRRDLQKLRLQS-KNLKIITKMPKN*KHNFIGQR---RRFHCSTSIVFEKNCVRDLT 150
           E + RR L KL L+  +N+  +T         +I Q    R  H ST I F + CV D T
Sbjct: 192 ERKARRILMKLDLKPMENVARVTMKKGKNILLYIDQPDVYRVAHSSTYIFFGEICVED-T 250

Query: 149 STTSVNQQSAV 117
           STTSV  Q+AV
Sbjct: 251 STTSVASQAAV 261


>BT025087-1|ABE73258.1|  463|Drosophila melanogaster IP13921p
           protein.
          Length = 463

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
 Frame = -3

Query: 185 IVFEKNCVRDLTST---TSVNQQSAVGSSLQSYYFK-QIKMSL*NRIECKRQSVD 33
           +VF +    D T T   ++ N+ S + + L+  + + +IKM L  +I CK + +D
Sbjct: 10  VVFNERAYNDSTKTKLKSAENKSSTLENGLKKIHIQIEIKMKLYEKINCKIEEMD 64


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,272,458
Number of Sequences: 53049
Number of extensions: 336790
Number of successful extensions: 1091
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1091
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1539014778
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)