Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20327
(759 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 174 5e-44
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 171 5e-43
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 171 5e-43
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 152 2e-37
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 112 2e-25
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 112 2e-25
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 90 2e-18
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 69 5e-12
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 69 5e-12
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 65 6e-11
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 65 6e-11
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 65 6e-11
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 50 2e-06
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 45 5e-05
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 40 0.002
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 38 0.006
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 33 0.17
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 33 0.29
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 33 0.29
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 1.2
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 30 1.6
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 30 1.6
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 30 1.6
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 30 2.1
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 2.1
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 2.7
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 2.7
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 2.7
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 2.7
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 3.6
U80022-4|AAC25887.2| 469|Caenorhabditis elegans Expulsion defec... 29 4.7
U80022-3|AAV28354.1| 490|Caenorhabditis elegans Expulsion defec... 29 4.7
U80022-2|AAV28355.1| 510|Caenorhabditis elegans Expulsion defec... 29 4.7
U80022-1|AAV28356.1| 501|Caenorhabditis elegans Expulsion defec... 29 4.7
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 8.3
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 174 bits (424), Expect = 5e-44
Identities = 99/167 (59%), Positives = 107/167 (64%)
Frame = +3
Query: 9 AQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITG 188
AQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITG
Sbjct: 46 AQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITG 105
Query: 189 TSQADCAVLIVAAGTGEFEAGILRTVKXXXXXXXXXXXXXXXXXXE*TKWIPLNHHTVSP 368
TSQADCAVL+VA GTGEFEAGI + + + + L T SP
Sbjct: 106 TSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGV-------KQLVSLRSPTRSP 158
Query: 369 DLRKSRRKYPHTSRRLATTQLLSLSCPFLDGTETTCWSLQPKCLGSR 509
D +SRR T Q L D TETTC C GSR
Sbjct: 159 D----------SSRRSDTIQRLFHLSQSPDSTETTCLRSPRTCHGSR 195
Score = 54.0 bits (124), Expect = 1e-07
Identities = 48/140 (34%), Positives = 63/140 (45%)
Frame = +2
Query: 257 KNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAV 436
KNGQTREHALLA TLGVKQL V+ T P S R + I++ + + +P +
Sbjct: 129 KNGQTREHALLAQTLGVKQL---VSLRSPTRSPDSSRRSDTIQR-----LFHLSQSPDST 180
Query: 437 AFVPISGWHGDNMLEPSTKMPWFKDGRWSVKKAKLTENASLKLSMPSCHLPAPLTSPCVF 616
L +DG + +K L E S +L PS H A LT VF
Sbjct: 181 E---------TTCLRSPRTCHGSRDGLLNARKETLPERPSSRLLTPSSHHNAQLTDHSVF 231
Query: 617 PCKTYTKSVVLVPCPSAELK 676
+ T+S L P S L+
Sbjct: 232 HSRMCTRSEELEPSQSDVLR 251
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 171 bits (416), Expect = 5e-43
Identities = 78/82 (95%), Positives = 81/82 (98%)
Frame = +3
Query: 9 AQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITG 188
AQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITG
Sbjct: 46 AQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITG 105
Query: 189 TSQADCAVLIVAAGTGEFEAGI 254
TSQADCAVL+VA GTGEFEAGI
Sbjct: 106 TSQADCAVLVVACGTGEFEAGI 127
Score = 168 bits (408), Expect = 4e-42
Identities = 92/171 (53%), Positives = 110/171 (64%), Gaps = 4/171 (2%)
Frame = +2
Query: 257 KNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAV 436
KNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV
Sbjct: 129 KNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAV 188
Query: 437 AFVPISGWHGDNMLEPSTKMPWFKDGRWSVKKAKLTENASLKLSMPSCHLP--APLTSPC 610
FVPISG++GDNMLE S+ MPWFK W+V++ + + L +P P P
Sbjct: 189 PFVPISGFNGDNMLEVSSNMPWFKG--WAVERKEGNASGKTLLEALDSIIPPQRPTDRPL 246
Query: 611 VFPCKTYTK--SVVLVPCPSAELKLVC*NQVPLLSLPRNITTEVKSVEMHH 757
P + K + VP E ++ V + P+N+TTEVKSVEMHH
Sbjct: 247 RLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFA-PQNVTTEVKSVEMHH 296
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 171 bits (416), Expect = 5e-43
Identities = 78/82 (95%), Positives = 81/82 (98%)
Frame = +3
Query: 9 AQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITG 188
AQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITG
Sbjct: 46 AQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITG 105
Query: 189 TSQADCAVLIVAAGTGEFEAGI 254
TSQADCAVL+VA GTGEFEAGI
Sbjct: 106 TSQADCAVLVVACGTGEFEAGI 127
Score = 168 bits (408), Expect = 4e-42
Identities = 92/171 (53%), Positives = 110/171 (64%), Gaps = 4/171 (2%)
Frame = +2
Query: 257 KNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAV 436
KNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV
Sbjct: 129 KNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAV 188
Query: 437 AFVPISGWHGDNMLEPSTKMPWFKDGRWSVKKAKLTENASLKLSMPSCHLP--APLTSPC 610
FVPISG++GDNMLE S+ MPWFK W+V++ + + L +P P P
Sbjct: 189 PFVPISGFNGDNMLEVSSNMPWFKG--WAVERKEGNASGKTLLEALDSIIPPQRPTDRPL 246
Query: 611 VFPCKTYTK--SVVLVPCPSAELKLVC*NQVPLLSLPRNITTEVKSVEMHH 757
P + K + VP E ++ V + P+N+TTEVKSVEMHH
Sbjct: 247 RLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFA-PQNVTTEVKSVEMHH 296
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 152 bits (369), Expect = 2e-37
Identities = 69/72 (95%), Positives = 72/72 (100%)
Frame = +3
Query: 9 AQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITG 188
AQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITG
Sbjct: 46 AQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITG 105
Query: 189 TSQADCAVLIVA 224
TSQADCAVL+VA
Sbjct: 106 TSQADCAVLVVA 117
Score = 132 bits (320), Expect = 2e-31
Identities = 73/152 (48%), Positives = 92/152 (60%), Gaps = 4/152 (2%)
Frame = +2
Query: 314 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTK 493
L+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 494 MPWFKDGRWSVKKAKLTENASLKLSMPSCHLP--APLTSPCVFPCKTYTK--SVVLVPCP 661
MPWFK W+V++ + + L +P P P P + K + VP
Sbjct: 174 MPWFKG--WAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVG 231
Query: 662 SAELKLVC*NQVPLLSLPRNITTEVKSVEMHH 757
E ++ V + P+N+TTEVKSVEMHH
Sbjct: 232 RVETGIIKPGMVVTFA-PQNVTTEVKSVEMHH 262
Score = 132 bits (318), Expect = 3e-31
Identities = 57/73 (78%), Positives = 66/73 (90%)
Frame = +1
Query: 505 QGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGV 684
+GW VERKEG A GK L+EALD+I+PP RPTD+PLRLPLQDVYKIGGIGTVPVGRVETG+
Sbjct: 178 KGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGI 237
Query: 685 LKPGTIVVFAPQH 723
+KPG +V FAPQ+
Sbjct: 238 IKPGMVVTFAPQN 250
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 112 bits (270), Expect = 2e-25
Identities = 51/81 (62%), Positives = 61/81 (75%)
Frame = +3
Query: 9 AQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITG 188
A GK SF YAWVLD+ + ERERG+T+DI FETS + ++DAPGH+DFI NMITG
Sbjct: 209 AARNGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITG 268
Query: 189 TSQADCAVLIVAAGTGEFEAG 251
TSQAD A+L+V A TGEFE G
Sbjct: 269 TSQADAAILVVNATTGEFETG 289
Score = 70.1 bits (164), Expect = 2e-12
Identities = 37/89 (41%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Frame = +2
Query: 251 YPKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNP 427
+ GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++
Sbjct: 290 FENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSK 347
Query: 428 AAVAFVPISGWHGDNMLEPSTKMPWFKDG 514
FVP+SG+ G+N+++ ++ W+ DG
Sbjct: 348 P--KFVPVSGFTGENLIK-RMELDWY-DG 372
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +1
Query: 541 DGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETG 681
DG CL+E +D+ + P P+D PLR+ + DV K+ V G++E+G
Sbjct: 371 DGPCLLELIDSFVAPQPPSDGPLRIGISDVLKVASNQLVVSGKIESG 417
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 112 bits (270), Expect = 2e-25
Identities = 51/81 (62%), Positives = 61/81 (75%)
Frame = +3
Query: 9 AQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITG 188
A GK SF YAWVLD+ + ERERG+T+DI FETS + ++DAPGH+DFI NMITG
Sbjct: 227 AARNGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITG 286
Query: 189 TSQADCAVLIVAAGTGEFEAG 251
TSQAD A+L+V A TGEFE G
Sbjct: 287 TSQADAAILVVNATTGEFETG 307
Score = 70.1 bits (164), Expect = 2e-12
Identities = 37/89 (41%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Frame = +2
Query: 251 YPKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNP 427
+ GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++
Sbjct: 308 FENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSK 365
Query: 428 AAVAFVPISGWHGDNMLEPSTKMPWFKDG 514
FVP+SG+ G+N+++ ++ W+ DG
Sbjct: 366 P--KFVPVSGFTGENLIK-RMELDWY-DG 390
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +1
Query: 541 DGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETG 681
DG CL+E +D+ + P P+D PLR+ + DV K+ V G++E+G
Sbjct: 389 DGPCLLELIDSFVAPQPPSDGPLRIGISDVLKVASNQLVVSGKIESG 435
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 89.8 bits (213), Expect = 2e-18
Identities = 40/84 (47%), Positives = 57/84 (67%)
Frame = +3
Query: 9 AQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITG 188
A+E G+ S+ +W +D ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G
Sbjct: 148 AKEKGRESWYLSWCMDTNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVG 207
Query: 189 TSQADCAVLIVAAGTGEFEAGILR 260
+QAD AVL+++A GEFE G R
Sbjct: 208 ANQADLAVLVISARRGEFETGFDR 231
Score = 71.7 bits (168), Expect = 5e-13
Identities = 31/73 (42%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Frame = +2
Query: 251 YPKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPA 430
+ + GQTREH++L T GVK L++ VNKMD + E RF+EI+ +++ +++K+G+NP
Sbjct: 229 FDRGGQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKLGFNPK 288
Query: 431 A-VAFVPISGWHG 466
+ +VP SG G
Sbjct: 289 TDITYVPCSGLTG 301
Score = 37.9 bits (84), Expect = 0.008
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +1
Query: 544 GKCLIEALDAILPP-ARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAP 717
G C IE +D +LP R + P+R + + Y +GTV +G++E+G ++ G +V P
Sbjct: 318 GPCFIEFIDVLLPSYKRDFNGPVRCTVAEKYS--EMGTVIIGKMESGCVQKGDTLVVMP 374
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 68.5 bits (160), Expect = 5e-12
Identities = 34/65 (52%), Positives = 44/65 (67%)
Frame = +3
Query: 51 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 230
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 231 TGEFE 245
G E
Sbjct: 143 DGVME 147
Score = 39.5 bits (88), Expect = 0.003
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Frame = +1
Query: 484 FNQNA--LVQGWQVERKEGKADGKC---LIEALDAILPPARPTDKPLRLPLQDVYKIGGI 648
FN +A +++G + EG+ D C LI+ALD++ P R +P+ I G
Sbjct: 195 FNGDATPVIRGSALSALEGQ-DISCIERLIDALDSLPEPDRNEKDTFVMPIASKTAITGR 253
Query: 649 GTVPVGRVETGVLKPG 696
GTV VG +E GVLK G
Sbjct: 254 GTVIVGTLERGVLKKG 269
Score = 33.1 bits (72), Expect = 0.22
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +2
Query: 266 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFV 445
QT+EH +LA +GVK + + +NK D E E + ++ E + G+N A +
Sbjct: 148 QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHGFNGDATPVI 203
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 68.5 bits (160), Expect = 5e-12
Identities = 34/65 (52%), Positives = 44/65 (67%)
Frame = +3
Query: 51 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 230
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 231 TGEFE 245
G E
Sbjct: 143 DGVME 147
Score = 39.5 bits (88), Expect = 0.003
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Frame = +1
Query: 484 FNQNA--LVQGWQVERKEGKADGKC---LIEALDAILPPARPTDKPLRLPLQDVYKIGGI 648
FN +A +++G + EG+ D C LI+ALD++ P R +P+ I G
Sbjct: 195 FNGDATPVIRGSALSALEGQ-DISCIERLIDALDSLPEPDRNEKDTFVMPIASKTAITGR 253
Query: 649 GTVPVGRVETGVLKPG 696
GTV VG +E GVLK G
Sbjct: 254 GTVIVGTLERGVLKKG 269
Score = 33.1 bits (72), Expect = 0.22
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +2
Query: 266 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFV 445
QT+EH +LA +GVK + + +NK D E E + ++ E + G+N A +
Sbjct: 148 QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHGFNGDATPVI 203
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 64.9 bits (151), Expect = 6e-11
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +3
Query: 51 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 230
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 87 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 146
Query: 231 TG 236
G
Sbjct: 147 DG 148
Score = 36.7 bits (81), Expect = 0.018
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = +1
Query: 532 GKADGKCLIEALDA--ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 696
G+ K L+E LD ++P + ++P+ + VY I G GTV G++E G+LK G
Sbjct: 226 GEEAVKQLLEVLDNKFVIPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRG 281
Score = 33.9 bits (74), Expect = 0.13
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +2
Query: 266 QTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 421
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + + GY
Sbjct: 152 QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 202
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 64.9 bits (151), Expect = 6e-11
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +3
Query: 51 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 230
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 231 TG 236
G
Sbjct: 148 DG 149
Score = 36.7 bits (81), Expect = 0.018
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = +1
Query: 532 GKADGKCLIEALDA--ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 696
G+ K L+E LD ++P + ++P+ + VY I G GTV G++E G+LK G
Sbjct: 227 GEEAVKQLLEVLDNKFVIPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRG 282
Score = 33.9 bits (74), Expect = 0.13
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +2
Query: 266 QTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 421
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + + GY
Sbjct: 153 QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 203
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 64.9 bits (151), Expect = 6e-11
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +3
Query: 51 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 230
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 231 TG 236
G
Sbjct: 148 DG 149
Score = 36.7 bits (81), Expect = 0.018
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = +1
Query: 532 GKADGKCLIEALDA--ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 696
G+ K L+E LD ++P + ++P+ + VY I G GTV G++E G+LK G
Sbjct: 227 GEEAVKQLLEVLDNKFVIPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRG 282
Score = 33.9 bits (74), Expect = 0.13
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +2
Query: 266 QTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 421
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + + GY
Sbjct: 153 QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 203
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +3
Query: 48 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 227
+LDKL+ ERERGIT+ Y + +ID PGH DF + + D +L+VAA
Sbjct: 76 MLDKLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAA 135
Query: 228 GTG 236
G
Sbjct: 136 NQG 138
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 45.2 bits (102), Expect = 5e-05
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +3
Query: 9 AQEMGKGSFKYAWVLDKLKAER 74
AQEMGKGSFKYAWVLDKLK +
Sbjct: 46 AQEMGKGSFKYAWVLDKLKVTK 67
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +3
Query: 48 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 227
V D L ERERGIT+ A + + + +ID PGH DF + D V+++
Sbjct: 64 VTDFLDIERERGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDG 123
Query: 228 GTG 236
G
Sbjct: 124 SAG 126
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +3
Query: 51 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 230
+D + ER+RGITI A + + IID PGH DF + D AVL++ G
Sbjct: 87 MDFMDLERQRGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CG 145
Query: 231 TG 236
G
Sbjct: 146 VG 147
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 38.3 bits (85), Expect = 0.006
Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 21 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 197
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 198 ADCAVLIVAAGTG 236
AD VL+VAA G
Sbjct: 228 ADIVVLVVAADDG 240
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 51 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 221
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 51 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 221
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 32.7 bits (71), Expect = 0.29
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +3
Query: 54 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 218
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 172 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 231
Query: 219 VAAGTG 236
V A G
Sbjct: 232 VDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 32.7 bits (71), Expect = 0.29
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +3
Query: 54 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 218
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 47 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 106
Query: 219 VAAGTG 236
V A G
Sbjct: 107 VDAHEG 112
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 129 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 224
+V+ +D PGH + M+ G + D A L+VA
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVA 159
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +3
Query: 87 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 236
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 30.3 bits (65), Expect = 1.6
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +1
Query: 604 PLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAP 717
P + D+Y + G+GT+ G + +G ++ I++ P
Sbjct: 373 PAHFQIDDIYWVDGVGTIASGTLLSGTIRLNDILLLGP 410
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 30.3 bits (65), Expect = 1.6
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +1
Query: 604 PLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAP 717
P + D+Y + G+GT+ G + +G ++ I++ P
Sbjct: 372 PAHFQIDDIYWVDGVGTIASGTLLSGTIRLNDILLLGP 409
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +3
Query: 87 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 236
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 138 IIDAPGHRDFIKNMITGTSQADCAVLIV 221
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 396 PHTSRRLATTQLLSLSCPFLD 458
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 396 PHTSRRLATTQLLSLSCPFLD 458
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 396 PHTSRRLATTQLLSLSCPFLD 458
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 396 PHTSRRLATTQLLSLSCPFLD 458
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +2
Query: 266 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY--NPAAVA 439
QT EH LLA ++I+ +NK D E + + E K+V +K +G N V
Sbjct: 112 QTAEHLLLASKFCPNRVIIVLNKCDLAE----KSKISESAKKVRKGLKSMGVDENSPIVE 167
Query: 440 FVPISGWHGDNMLE 481
G+ + ML+
Sbjct: 168 MSLADGYFKEEMLQ 181
>U80022-4|AAC25887.2| 469|Caenorhabditis elegans Expulsion
defective (defecation)protein 2, isoform a protein.
Length = 469
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +1
Query: 397 LIHQEDWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGWQVERKEGKAD 543
++H+ + P+ FW QHVG+ + + Q + E++E K D
Sbjct: 108 VVHRPSEICPASFLSELDFWRISHQHVGSCCADIIPQKREEEKEEEKVD 156
>U80022-3|AAV28354.1| 490|Caenorhabditis elegans Expulsion
defective (defecation)protein 2, isoform b protein.
Length = 490
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +1
Query: 397 LIHQEDWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGWQVERKEGKAD 543
++H+ + P+ FW QHVG+ + + Q + E++E K D
Sbjct: 129 VVHRPSEICPASFLSELDFWRISHQHVGSCCADIIPQKREEEKEEEKVD 177
>U80022-2|AAV28355.1| 510|Caenorhabditis elegans Expulsion
defective (defecation)protein 2, isoform c protein.
Length = 510
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +1
Query: 397 LIHQEDWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGWQVERKEGKAD 543
++H+ + P+ FW QHVG+ + + Q + E++E K D
Sbjct: 149 VVHRPSEICPASFLSELDFWRISHQHVGSCCADIIPQKREEEKEEEKVD 197
>U80022-1|AAV28356.1| 501|Caenorhabditis elegans Expulsion
defective (defecation)protein 2, isoform d protein.
Length = 501
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +1
Query: 397 LIHQEDWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGWQVERKEGKAD 543
++H+ + P+ FW QHVG+ + + Q + E++E K D
Sbjct: 140 VVHRPSEICPASFLSELDFWRISHQHVGSCCADIIPQKREEEKEEEKVD 188
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 132 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 227
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,605,523
Number of Sequences: 27780
Number of extensions: 446558
Number of successful extensions: 1523
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1513
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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