Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20323
(679 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 1e-12
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 64 1e-10
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 56 3e-08
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 55 6e-08
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 53 2e-07
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 48 9e-06
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 43 3e-04
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 42 3e-04
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 40 0.001
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 39 0.004
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 38 0.007
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 36 0.023
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 36 0.023
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 36 0.023
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 35 0.053
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 35 0.070
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 34 0.092
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 32 0.37
SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.86
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 31 1.1
SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 30 1.5
SB_3046| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 29 3.5
SB_6554| Best HMM Match : Isy1 (HMM E-Value=0) 29 3.5
SB_23248| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_8125| Best HMM Match : MFS_1 (HMM E-Value=3.2e-07) 29 4.6
SB_15074| Best HMM Match : PID (HMM E-Value=0.00012) 28 8.0
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 70.5 bits (165), Expect = 1e-12
Identities = 31/89 (34%), Positives = 47/89 (52%)
Frame = +1
Query: 250 PSWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPD 429
P + +PFNKNFY+ HP + K+S E+++ R K + VSG P F F +
Sbjct: 467 PEKSKIDYKPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDE 526
Query: 430 YVQQGVKTMGYKEPTPIQAQGWPIAMLER 516
+ ++ + Y +PT IQ Q PIA+ R
Sbjct: 527 QMMASIRKLEYTQPTQIQCQALPIALSGR 555
Score = 64.9 bits (151), Expect = 6e-11
Identities = 28/46 (60%), Positives = 37/46 (80%)
Frame = +2
Query: 530 SQTGSGKTLAYILPAIVHINNQPPIRRSDGPIALVLAPTRELAQQI 667
++TGSGKT A++ PA+VHI +QP ++ DGPI L+ APTREL QQI
Sbjct: 561 AKTGSGKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQI 606
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +2
Query: 560 YILPAIVHINNQPPIRRSDGPIALVLAPTRELAQQIQQVA 679
+ILP IVHIN+QP ++ DGPI LVL PTRELAQQ+Q+VA
Sbjct: 113 FILPGIVHINHQPLLQPGDGPIVLVLCPTRELAQQVQEVA 152
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/56 (48%), Positives = 36/56 (64%)
Frame = +1
Query: 322 RSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 489
R +EV+ YR ++TV+G V P+ FEE+ FPDY+Q K G+ EPT IQAQ
Sbjct: 57 RGQHEVDAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQ 112
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 56.0 bits (129), Expect = 3e-08
Identities = 28/52 (53%), Positives = 37/52 (71%), Gaps = 4/52 (7%)
Frame = +2
Query: 530 SQTGSGKTLAYILPAIVHINNQPPIRRSD----GPIALVLAPTRELAQQIQQ 673
++TGSGKT A+ +P +V I P I R + GP AL+LAPTRELAQQI++
Sbjct: 145 AETGSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEE 196
Score = 48.8 bits (111), Expect = 4e-06
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +1
Query: 346 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLER 516
+R ++ G + PI+ ++EA PD + + V +GYK+PTPIQ Q PI + R
Sbjct: 83 FREDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNR 139
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 54.8 bits (126), Expect = 6e-08
Identities = 24/46 (52%), Positives = 32/46 (69%)
Frame = +2
Query: 530 SQTGSGKTLAYILPAIVHINNQPPIRRSDGPIALVLAPTRELAQQI 667
++TGSGKTLAY LP + + + P D P+AL+L PTREL QQ+
Sbjct: 116 AETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQV 161
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/79 (29%), Positives = 38/79 (48%)
Frame = +1
Query: 280 FNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 459
F ++YD + V + S V+E R K+ + + G + PI+ F + N P + +
Sbjct: 32 FMWSYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKN 91
Query: 460 YKEPTPIQAQGWPIAMLER 516
++ PTPIQ Q M R
Sbjct: 92 FQVPTPIQMQSLSCVMSGR 110
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 54.0 bits (124), Expect = 1e-07
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +1
Query: 262 SVSLQPFNKNFYDPHPTVLKRSPYEVEEYR-NKHEVTVSGVEVHNPIQYFEEANFPDYVQ 438
+V QPF K+FY P + K +P E +E+R + + V G P++ + + +
Sbjct: 58 TVVYQPFRKDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWAQTGVQLKIL 117
Query: 439 QGVKTMGYKEPTPIQAQGWPIAMLER 516
+K Y++PTPIQAQ P+ M R
Sbjct: 118 DVLKKNSYEKPTPIQAQAIPVIMSGR 143
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +2
Query: 548 KTLAYILPAIVHINNQPPIRRSDGPIALVLAPTRELAQQIQQ 673
K +Y P + P I IA+V+ PTRELA QI +
Sbjct: 121 KKNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELAIQIHR 162
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/74 (32%), Positives = 40/74 (54%)
Frame = +1
Query: 295 YDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 474
Y HPT+ + +V++ R+K E+ V G V +P+ F +F + + + + GY PT
Sbjct: 161 YKEHPTIAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPT 220
Query: 475 PIQAQGWPIAMLER 516
PIQ Q P+ + R
Sbjct: 221 PIQMQVLPVLLSGR 234
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/46 (52%), Positives = 31/46 (67%)
Frame = +2
Query: 530 SQTGSGKTLAYILPAIVHINNQPPIRRSDGPIALVLAPTRELAQQI 667
+QTGSGKT AY+LP + + Q P+AL +APTRELA+QI
Sbjct: 523 AQTGSGKTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQI 568
Score = 34.7 bits (76), Expect = 0.070
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +1
Query: 370 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLER 516
VSG I F E F + + + GY+ PTP+Q PI M R
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGR 517
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 47.6 bits (108), Expect = 9e-06
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Frame = +1
Query: 334 EVEEYRNKHEVTVSGVEVHNPIQYF----EEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 501
++ +R++ + V G +V +P++ F E FPDY+ V+ GY PTPIQ Q P+
Sbjct: 137 KINLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPIQMQATPL 196
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/48 (41%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = +2
Query: 527 RSQTGSGKTLAYILPAIVHINN-QPPIRRSDGPIALVLAPTRELAQQI 667
+++TG+GKTL++ LP + + + + +R P LV+APTRELA+Q+
Sbjct: 116 QARTGTGKTLSFALPLVEKLQDGKLSQKRGRAPKVLVMAPTRELAKQV 163
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/49 (48%), Positives = 33/49 (67%)
Frame = +2
Query: 530 SQTGSGKTLAYILPAIVHINNQPPIRRSDGPIALVLAPTRELAQQIQQV 676
++TGSGKTLA+++P I + Q DG ALV++PTRELA Q +V
Sbjct: 94 AKTGSGKTLAFLIPIIETLWRQ-KWTSMDGLGALVISPTRELAYQTFEV 141
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 41.9 bits (94), Expect = 5e-04
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Frame = +2
Query: 527 RSQTGSGKTLAYILPAIVHIN-NQPPIRRSDGPIALVLAPTRELAQQIQQV 676
++Q+G+GKT + + + I+ N D ALVLAPTRELAQQIQ+V
Sbjct: 128 QAQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQKV 178
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Frame = +2
Query: 530 SQTGSGKTLAYILPAIVHINN----QPPIRRSDGPIALVLAPTRELAQQI 667
+QTGSGKT A++LP + + N + P A+ +APTRELA QI
Sbjct: 755 AQTGSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQI 804
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/59 (38%), Positives = 31/59 (52%)
Frame = +1
Query: 340 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLER 516
E+Y ++ EV VSG I FEEAN + V+ YK+PTP+Q PI + R
Sbjct: 692 EKY-DQIEVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGR 749
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +2
Query: 530 SQTGSGKTLAYILPAIVHINNQPP----IRRSDGPIALVLAPTRELAQQIQQVA 679
+QTGSGKTLAY+ P + + + R P A ++ P RELA QI + A
Sbjct: 422 AQTGSGKTLAYLAPLVHRLREDEERHGILARLKRPRACIVVPARELATQILKTA 475
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/50 (46%), Positives = 34/50 (68%)
Frame = +2
Query: 527 RSQTGSGKTLAYILPAIVHINNQPPIRRSDGPIALVLAPTRELAQQIQQV 676
++Q+G+GKT + + + I+ Q +R P ALVL+PTRELA QIQ+V
Sbjct: 40 QAQSGTGKTATFSISVLQAIDTQ--LRE---PQALVLSPTRELANQIQKV 84
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/50 (38%), Positives = 34/50 (68%)
Frame = +2
Query: 530 SQTGSGKTLAYILPAIVHINNQPPIRRSDGPIALVLAPTRELAQQIQQVA 679
++TGSGKTLA+++P +V + + + +G ++++PTREL+ Q VA
Sbjct: 616 AKTGSGKTLAFLVP-VVELLYKLQFKTRNGTGVIIISPTRELSLQTYGVA 664
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/59 (38%), Positives = 31/59 (52%)
Frame = +1
Query: 340 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLER 516
E+Y ++ EV VSG I FEEAN + V+ YK+PTP+Q PI + R
Sbjct: 115 EKY-DQIEVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGR 172
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/46 (47%), Positives = 29/46 (63%)
Frame = +2
Query: 530 SQTGSGKTLAYILPAIVHINNQPPIRRSDGPIALVLAPTRELAQQI 667
++TGSGKT A+ LP + + + P G A+VL PTRELA QI
Sbjct: 51 AKTGSGKTAAFALPILQKLCDDP-----YGIFAVVLTPTRELAFQI 91
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 37.5 bits (83), Expect = 0.010
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 14/61 (22%)
Frame = +2
Query: 530 SQTGSGKTLAYILPAIVHI--------NNQPPIRRSD------GPIALVLAPTRELAQQI 667
++TGSGKTLA+ +P I HI P + SD +AL++APTRELA Q+
Sbjct: 175 AETGSGKTLAFGIPIIQHIEAYKKRKAEQSPSDKESDLESQGYPLLALIMAPTRELALQV 234
Query: 668 Q 670
+
Sbjct: 235 K 235
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 37.1 bits (82), Expect = 0.013
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +2
Query: 530 SQTGSGKTLAYILPAIVHINNQPPIRRSDGPIALVLAPTRELAQQIQQ 673
++TGSGKT A+++P + G AL+L+PTRELA Q Q+
Sbjct: 325 ARTGSGKTAAFLIPMFEKLQTHTA---KVGIRALILSPTRELALQTQK 369
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 36.3 bits (80), Expect = 0.023
Identities = 21/48 (43%), Positives = 29/48 (60%)
Frame = +2
Query: 530 SQTGSGKTLAYILPAIVHINNQPPIRRSDGPIALVLAPTRELAQQIQQ 673
++TGSGKT A+ LP + + + P AL+L PTRELA QI +
Sbjct: 8 AETGSGKTGAFALPILQALLDNP-----QRLFALILTPTRELAFQISE 50
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 36.3 bits (80), Expect = 0.023
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +2
Query: 503 LCWKEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRSDGPIALVLAPTRELAQQIQQV 676
L ++ R++ G+GKT AY++P + + + ALVL PTRELA Q Q+
Sbjct: 82 LAGRDILARAKNGTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQTSQI 134
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 36.3 bits (80), Expect = 0.023
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +2
Query: 503 LCWKEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRSDGPIALVLAPTRELAQQIQQV 676
L ++ R++ G+GKT AY++P + + + ALVL PTRELA Q Q+
Sbjct: 82 LAGRDILARAKNGTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQTSQI 134
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 35.1 bits (77), Expect = 0.053
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +2
Query: 527 RSQTGSGKTLAYILPAIVHINNQPPIRRSDGPIALVLAPTRELAQQIQQVA 679
+SQ+G+GKT A++L + ++ P P + L+PT ELA+Q +VA
Sbjct: 148 QSQSGTGKTAAFVLTMLSRVDATKPY-----PQVICLSPTYELARQTGKVA 193
Score = 31.1 bits (67), Expect = 0.86
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +1
Query: 355 KHEVTVSGVEVHNPI---QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLE 513
KHEV V + +P+ + FEE +++GV MG+ +P+ IQ P+ + +
Sbjct: 85 KHEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLAD 140
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 34.7 bits (76), Expect = 0.070
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +2
Query: 536 TGSGKTLAYILPAIVHINNQPPIRRSDGPIALVLAPTRELAQQ 664
TG+GKT A++LP + + +P +S LV+ PTRELA Q
Sbjct: 56 TGTGKTAAFMLPILERLLYRP--TQSPAIRVLVITPTRELAIQ 96
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 34.3 bits (75), Expect = 0.092
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +2
Query: 527 RSQTGSGKTLAYILPAIVHINNQPPIRRSDGPIALVLAPTRELAQQI 667
+S+TG+GK+L ++LP++ Q P R G +++ PTRELA Q+
Sbjct: 203 KSETGTGKSLVFLLPSV-----QDPGR---GYGTIIVVPTRELASQM 241
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 32.3 bits (70), Expect = 0.37
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2
Query: 620 PIALVLAPTRELAQQIQQV 676
P ALVL+PTRELA QIQ+V
Sbjct: 4 PQALVLSPTRELANQIQKV 22
>SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 31.1 bits (67), Expect = 0.86
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +1
Query: 382 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI*LA*PNGF 543
++H P++ + FP Y + Y P P QA W LER+ PNG+
Sbjct: 6 DIHGPVRKLHKHGFPGYEEDYAAVFKYPTPWPEQAMEW----LERV---RPNGW 52
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 397 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLER 516
I FE+ + + + V GYK+PTP+Q PI +R
Sbjct: 874 ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKR 913
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 530 SQTGSGKTLAYILPAIVHINNQPP 601
+QTGSGKT A+++P + I + P
Sbjct: 919 AQTGSGKTAAFLIPILSRIYMEGP 942
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Frame = +2
Query: 476 PFKLKA---GR*LCWKEFSWRSQTGSGKTLAYILPAIVHINNQPPIRRSDGPIALVLAPT 646
P +LKA GR C + ++++G+GKT + + A+ ++ I S+ ++L PT
Sbjct: 38 PIQLKAIPLGR--CGLDLIAQAKSGTGKTCVFSVIALENV-----ITESNCIQIIILTPT 90
Query: 647 RELAQQIQQV 676
RE+A Q++ V
Sbjct: 91 REIAVQVKDV 100
>SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 505
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 328 PYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 459
P+E + + KH++ V+ VE + +Q +E F + ++Q VK G
Sbjct: 252 PFEPPKPKTKHKLDVATVEDYKKLQEYEREKFTEMIKQ-VKDTG 294
>SB_3046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 734
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 212 HQSLQILQIYCHRCQTETNYRRICCLLQIWNHRFHGY 102
H L YC RC T CCLLQ++++ ++G+
Sbjct: 484 HLQQPSLAAYC-RCITILTTAIACCLLQVYHNTYNGH 519
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +2
Query: 539 GSGKTLAYILPAIVHINNQPPIRR---SDGPIALVL 637
GSGK LAY+LP I I + ++GP+ L+L
Sbjct: 234 GSGKRLAYLLPIIHQITESSVYQELPLANGPLVLIL 269
>SB_6554| Best HMM Match : Isy1 (HMM E-Value=0)
Length = 675
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 340 EEYRNK-HEVTVSGVEVHNPIQYFEEANFPDY 432
EE NK H++ + + +HNP YFE+ + DY
Sbjct: 234 EEVNNKLHKILIVNM-IHNPFNYFEKKSPTDY 264
>SB_23248| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 29
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -1
Query: 277 VGVKQNPNWASHVLPSREF 221
VGV+ WAS++LPSR+F
Sbjct: 10 VGVRDIEQWASNLLPSRQF 28
>SB_8125| Best HMM Match : MFS_1 (HMM E-Value=3.2e-07)
Length = 401
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = -3
Query: 278 GWSETESQLGVACS--ALQRILFSHQSLQILQIYCHRCQTETNYRRICCLLQIWN-HRFH 108
GW T + S AL+RI + ++ C +YRR CC L +W H +
Sbjct: 181 GWRVTLRVIAATTSQQALERIATPVTTSKLRCSTTQECCVRVDYRRKCC-LHVWRVHTTN 239
Query: 107 GYYSN 93
Y+S+
Sbjct: 240 TYWSS 244
>SB_15074| Best HMM Match : PID (HMM E-Value=0.00012)
Length = 1153
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 447 KDNGLQRTDAHSSSRLADSYVGKNLVGVAKRVPAKR 554
K +GL+R + S RLA +G +L K VP +R
Sbjct: 576 KGSGLERPKSLSLKRLASGSLGLHLAKFVKSVPVQR 611
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,342,936
Number of Sequences: 59808
Number of extensions: 425291
Number of successful extensions: 1207
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1191
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1745338465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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