Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20322
(642 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 73 2e-13
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 64 8e-11
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 62 2e-10
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 61 6e-10
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 55 5e-08
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 53 2e-07
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 50 1e-06
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 50 1e-06
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 50 1e-06
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 50 1e-06
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 38 0.005
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 38 0.005
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 38 0.005
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 36 0.019
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 36 0.019
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 36 0.033
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 35 0.043
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 35 0.043
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 34 0.075
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 33 0.13
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 33 0.13
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 33 0.13
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 33 0.23
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 33 0.23
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 33 0.23
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 32 0.40
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 31 0.70
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 30 1.6
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 30 1.6
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 29 2.1
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 29 2.1
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 29 2.1
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 29 2.1
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 2.8
U00031-8|AAK18869.1| 201|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 29 3.7
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 27 8.6
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 27 8.6
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 27 8.6
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 72.5 bits (170), Expect = 2e-13
Identities = 42/111 (37%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Frame = +1
Query: 250 RRYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 429
R +R +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++
Sbjct: 281 RIFREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRD 340
Query: 430 LVGV-PNGFRQNVGLHLA----SHCAHK*PTAIRRGDGPIALVLAPTRELA 567
++GV G + L K R GP A+++APTRELA
Sbjct: 341 VIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELA 391
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2
Query: 443 QTGSGKTLAYILPAIVHINNQP 508
+TGSGKT A++LP +V I + P
Sbjct: 346 ETGSGKTAAFLLPLLVWITSLP 367
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 64.1 bits (149), Expect = 8e-11
Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Frame = +1
Query: 253 RYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 432
R +N + V G++ P+ F +F + + ++ Y++PTPIQA P A+SG+++
Sbjct: 246 RLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDV 305
Query: 433 VGVPNGFRQNVGLHLASHCAH-K*PTAIRRGDGPIALVLAPTRELA 567
+G+ +L H ++ G+GP+A+++ PTRELA
Sbjct: 306 LGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELA 351
Score = 38.3 bits (85), Expect = 0.005
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 2/117 (1%)
Frame = +2
Query: 164 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEGIEINTR*L*V-ALRFIILFNTLKKQIFLI 340
D + Q FNKNFY+ H + + +V ++ NT L V L+ + F
Sbjct: 216 DHSQIQYQKFNKNFYEEHEDIKRLHYMDVIRLQ-NTMNLRVGGLKPPRPVCSFAHFSFDK 274
Query: 341 MCNKV*RQWVTKNRRPFKLKAGR*LCLERI*LAY-QTGSGKTLAYILPAIVHINNQP 508
+ + R+ + P + A R L +TGSGKT AY+ PAIVHI +QP
Sbjct: 275 LLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQP 331
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 62.5 bits (145), Expect = 2e-10
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Frame = +1
Query: 250 RRYRNKHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 426
+ YR + + +TV G++ PI+ + + + +K Y +PT IQAQ P MSG+
Sbjct: 283 KAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGR 342
Query: 427 NLVGV-PNGFRQNVGLHLASHCAHK*PTAIRRGDGPIALVLAPTRELA 567
+++G+ G + + L + GDGPIA++LAPTRELA
Sbjct: 343 DVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELA 390
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 61.3 bits (142), Expect = 6e-10
Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Frame = +1
Query: 268 HEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPN 447
++VT+ G V P+ F EA P + + + +++PT IQ+ WPIAMSG++++ +
Sbjct: 116 NQVTLEGRGVPRPVFEFNEAPLPGQIHELLYGK-FQKPTVIQSISWPIAMSGRDIISIAK 174
Query: 448 GFRQNVGLHLASHCAHK*PTAIR-RGDGPIALVLAPTRELAXXXXXXXXXWTHIL 609
+ H A R RG+GP LVL PTRELA + H L
Sbjct: 175 TGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSL 229
Score = 50.8 bits (116), Expect = 8e-07
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 9/172 (5%)
Frame = +2
Query: 152 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEG-IEINTR*L*V--ALRFIILFNT-- 316
+R DW + +L P K+FY + V +R YE++ + N L R + FN
Sbjct: 77 LRDVDWSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAP 136
Query: 317 LKKQIFLIMCNKV*RQWVTKNRRPFKLKAGR*LCLERI*LAYQTGSGKTLAYILPAIVHI 496
L QI ++ K + V ++ +GR + I +A +TGSGKTLA++LPA+VHI
Sbjct: 137 LPGQIHELLYGKFQKPTVIQSISWPIAMSGR----DIISIA-KTGSGKTLAFMLPALVHI 191
Query: 497 NNQPL----FGEVMVRLLWSWRLPES*HNKFSSCCRFGHTSYVRNTCVFGGA 640
Q G ++ LL + L + C H+ ++ TC+FGGA
Sbjct: 192 TKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDFC---HSLGLKMTCLFGGA 240
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 54.8 bits (126), Expect = 5e-08
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Frame = +1
Query: 259 RNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTPIQAQGWPIAMSGKNLV 435
R + ++ G + PI F E FP + + + K G PT IQ QG P+A+SG++++
Sbjct: 172 RKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMI 231
Query: 436 GVP---NGFRQNVGLHLASHC-AHK*PTAIRRGDGPIALVLAPTRELA 567
G+ +G L L C + R +GP L++ P+RELA
Sbjct: 232 GIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELA 279
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 53.2 bits (122), Expect = 2e-07
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 8/103 (7%)
Frame = +1
Query: 283 SGVEVHNPIQYFEEANFPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLVGVPN---- 447
S V++ P+ FE+A + G ++ G+++P+PIQ+Q WP+ +SG++ +GV
Sbjct: 74 STVKIPPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSG 133
Query: 448 ---GFRQNVGLHLASHCAHK*PTAIRRGDGPIALVLAPTRELA 567
F LH+ + A + P LVL+PTRELA
Sbjct: 134 KTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELA 176
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 50.4 bits (115), Expect = 1e-06
Identities = 37/109 (33%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Frame = +1
Query: 274 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG---VP 444
V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L+
Sbjct: 127 VEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTG 186
Query: 445 NGFRQNVGLHLASHCAHK*PTAI--------RRGDGPIALVLAPTRELA 567
+G L + H P + RR P ALVL+PTRELA
Sbjct: 187 SGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELA 235
Score = 31.5 bits (68), Expect = 0.53
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2
Query: 443 QTGSGKTLAYILPAIVHI 496
QTGSGKT A++LP I HI
Sbjct: 184 QTGSGKTAAFLLPIIQHI 201
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 50.4 bits (115), Expect = 1e-06
Identities = 37/109 (33%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Frame = +1
Query: 274 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG---VP 444
V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L+
Sbjct: 111 VEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTG 170
Query: 445 NGFRQNVGLHLASHCAHK*PTAI--------RRGDGPIALVLAPTRELA 567
+G L + H P + RR P ALVL+PTRELA
Sbjct: 171 SGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELA 219
Score = 31.5 bits (68), Expect = 0.53
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2
Query: 443 QTGSGKTLAYILPAIVHI 496
QTGSGKT A++LP I HI
Sbjct: 168 QTGSGKTAAFLLPIIQHI 185
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 50.4 bits (115), Expect = 1e-06
Identities = 37/109 (33%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Frame = +1
Query: 274 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG---VP 444
V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L+
Sbjct: 108 VEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTG 167
Query: 445 NGFRQNVGLHLASHCAHK*PTAI--------RRGDGPIALVLAPTRELA 567
+G L + H P + RR P ALVL+PTRELA
Sbjct: 168 SGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELA 216
Score = 31.5 bits (68), Expect = 0.53
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2
Query: 443 QTGSGKTLAYILPAIVHI 496
QTGSGKT A++LP I HI
Sbjct: 165 QTGSGKTAAFLLPIIQHI 182
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 50.0 bits (114), Expect = 1e-06
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 12/110 (10%)
Frame = +1
Query: 274 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV------ 435
V +G +V PI F + + +++++ +KT GY PTP+Q P G++L+
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTG 213
Query: 436 -GVPNGF---RQNVGLHLASHCAHK*PTAI--RRGDGPIALVLAPTRELA 567
G F N L H+ T+ R+ P ALVL+PTREL+
Sbjct: 214 SGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELS 263
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 38.3 bits (85), Expect = 0.005
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Frame = +1
Query: 304 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG-VPNGFRQNVGLHLA 480
P + F EAN + +Q+ V GY + TPIQ P+ G +++ G + L
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 481 SHCA----HK*PTAIRRGDGPIALVLAPTRELA 567
+ TA G P ++L PTRELA
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELA 431
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 38.3 bits (85), Expect = 0.005
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Frame = +1
Query: 304 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG-VPNGFRQNVGLHLA 480
P + F EAN + +Q+ V GY + TPIQ P+ G +++ G + L
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 481 SHCA----HK*PTAIRRGDGPIALVLAPTRELA 567
+ TA G P ++L PTRELA
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELA 431
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 38.3 bits (85), Expect = 0.005
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Frame = +1
Query: 304 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG-VPNGFRQNVGLHLA 480
P + F EAN + +Q+ V GY + TPIQ P+ G +++ G + L
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 481 SHCA----HK*PTAIRRGDGPIALVLAPTRELA 567
+ TA G P ++L PTRELA
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELA 431
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 36.3 bits (80), Expect = 0.019
Identities = 26/90 (28%), Positives = 41/90 (45%)
Frame = +1
Query: 298 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPNGFRQNVGLHL 477
H +++ V + ++ G+ +PTPIQ + P M GK++V + R G
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMS---RTGSGKTA 76
Query: 478 ASHCAHK*PTAIRRGDGPIALVLAPTRELA 567
A R G AL+++PTRELA
Sbjct: 77 AFVIPMLQKLKRRDTTGIRALMVSPTRELA 106
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 36.3 bits (80), Expect = 0.019
Identities = 26/90 (28%), Positives = 41/90 (45%)
Frame = +1
Query: 298 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPNGFRQNVGLHL 477
H +++ V + ++ G+ +PTPIQ + P M GK++V + R G
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMS---RTGSGKTA 76
Query: 478 ASHCAHK*PTAIRRGDGPIALVLAPTRELA 567
A R G AL+++PTRELA
Sbjct: 77 AFVIPMLQKLKRRDTTGIRALMVSPTRELA 106
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 35.5 bits (78), Expect = 0.033
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +1
Query: 316 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 432
FE+ N + + GY +PTPIQ P+A++GK++
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDI 188
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 35.1 bits (77), Expect = 0.043
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Frame = +1
Query: 304 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG---VPNGFRQNVGLH 474
P + F +++ P +++ V+ GY TPIQ P+ GK+++ +G L
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 475 LASHCAHK*PT--AIRRGDGPIALVLAPTRELA 567
+ S + G P ++L PTRELA
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPTRELA 388
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 35.1 bits (77), Expect = 0.043
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Frame = +1
Query: 304 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG---VPNGFRQNVGLH 474
P + F +++ P +++ V+ GY TPIQ P+ GK+++ +G L
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 475 LASHCAHK*PT--AIRRGDGPIALVLAPTRELA 567
+ S + G P ++L PTRELA
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPTRELA 388
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 34.3 bits (75), Expect = 0.075
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +1
Query: 514 RRGDGPIALVLAPTRELA 567
R+ DGP+AL+LAPTRELA
Sbjct: 455 RQDDGPLALILAPTRELA 472
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 33.5 bits (73), Expect = 0.13
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Frame = +1
Query: 334 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK-NLVGVP---NGFRQNVGLHLASHCAH-- 495
P+ V + ++ MG+ EPT IQ+ P A+ + +++G +G G+ L +
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESS 222
Query: 496 --K*PTAIRRGDGPIALVLAPTREL 564
T GP AL++APTREL
Sbjct: 223 DDSQETESTEVRGPRALIVAPTREL 247
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 33.5 bits (73), Expect = 0.13
Identities = 26/84 (30%), Positives = 39/84 (46%)
Frame = +1
Query: 316 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPNGFRQNVGLHLASHCAH 495
F + ++ Q ++TM K TP+QA P + G +++G R G LA
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCA---RTGTGKTLAFAIPI 147
Query: 496 K*PTAIRRGDGPIALVLAPTRELA 567
++ G AL+L PTRELA
Sbjct: 148 LQKLSVDPY-GIYALILTPTRELA 170
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 33.5 bits (73), Expect = 0.13
Identities = 26/84 (30%), Positives = 39/84 (46%)
Frame = +1
Query: 316 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPNGFRQNVGLHLASHCAH 495
F + ++ Q ++TM K TP+QA P + G +++G R G LA
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCA---RTGTGKTLAFAIPI 147
Query: 496 K*PTAIRRGDGPIALVLAPTRELA 567
++ G AL+L PTRELA
Sbjct: 148 LQKLSVDPY-GIYALILTPTRELA 170
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 32.7 bits (71), Expect = 0.23
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
Frame = +1
Query: 316 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPNGFRQNVGLHLASHCA- 492
F EAN + +++ V GY + TPIQ P+ G +++ L A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 493 ----HK*PTAIRRGDGPIALVLAPTREL 564
+ TA G P ++L PTREL
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTREL 641
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 32.7 bits (71), Expect = 0.23
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
Frame = +1
Query: 316 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPNGFRQNVGLHLASHCA- 492
F EAN + +++ V GY + TPIQ P+ G +++ L A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 493 ----HK*PTAIRRGDGPIALVLAPTREL 564
+ TA G P ++L PTREL
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTREL 641
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 32.7 bits (71), Expect = 0.23
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
Frame = +1
Query: 316 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPNGFRQNVGLHLASHCA- 492
F EAN + +++ V GY + TPIQ P+ G +++ L A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 493 ----HK*PTAIRRGDGPIALVLAPTREL 564
+ TA G P ++L PTREL
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTREL 641
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 31.9 bits (69), Expect = 0.40
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 434 LAYQTGSGKTLAYILPAIVHINNQP 508
+A TGSGKT+ Y+LP + + ++P
Sbjct: 161 IAAPTGSGKTICYVLPVLAAVGSKP 185
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 31.1 bits (67), Expect = 0.70
Identities = 21/89 (23%), Positives = 40/89 (44%)
Frame = +1
Query: 301 NPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPNGFRQNVGLHLA 480
N I F++ + + +G+ G+++P+ IQ + P + ++++
Sbjct: 23 NVIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSI 82
Query: 481 SHCAHK*PTAIRRGDGPIALVLAPTRELA 567
S T +R AL+L+PTRELA
Sbjct: 83 S-VLQSLDTQVRETQ---ALILSPTRELA 107
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/15 (80%), Positives = 15/15 (100%)
Frame = +2
Query: 443 QTGSGKTLAYILPAI 487
+TGSGKTLA++LPAI
Sbjct: 113 KTGSGKTLAFLLPAI 127
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 29.9 bits (64), Expect = 1.6
Identities = 26/106 (24%), Positives = 47/106 (44%)
Frame = +1
Query: 250 RRYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 429
RR++ GVE FE+ + G+ G+++P+PIQ +A++G++
Sbjct: 30 RRFKTADVTDTKGVE-------FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQD 82
Query: 430 LVGVPNGFRQNVGLHLASHCAHK*PTAIRRGDGPIALVLAPTRELA 567
++ G + K A++ A+V+ PTRELA
Sbjct: 83 ILARAKNGTGKTGAYCIP-VIEKIQPALKAIQ---AMVIVPTRELA 124
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 18 VETVVPNLEEATNSAIIRLGLATVAIDLEDLEALVGKKN 134
+ETV+ LE N +RL A VA E LE++ GK N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 29.5 bits (63), Expect = 2.1
Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Frame = +1
Query: 316 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPNGFRQNVGLHLASHCAH 495
F E + + +G+ +P+ IQ P A+ GK+++G+ G A
Sbjct: 46 FAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTG-------AF 98
Query: 496 K*PTAIRRGDGPIA---LVLAPTRELA 567
P D P A LVL PTRELA
Sbjct: 99 AIPVLQSLLDHPQAFFCLVLTPTRELA 125
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 446 TGSGKTLAYILPAIVHINNQPL 511
TGSGKTLA++LP + I N L
Sbjct: 55 TGSGKTLAFVLPMMRMIQNAKL 76
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 29.5 bits (63), Expect = 2.1
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Frame = +1
Query: 307 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPN---GFRQNVGLHL 477
++ F++ + + +G+ G+++P+ IQ + +GK+++ G + +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87
Query: 478 ASHCAHK*PTAIRRGDGPIALVLAPTRELA 567
H+ P ALV+APTRELA
Sbjct: 88 LQRIDHEDPHVQ-------ALVMAPTRELA 110
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 29.5 bits (63), Expect = 2.1
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Frame = +1
Query: 307 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPN---GFRQNVGLHL 477
++ F++ + + +G+ G+++P+ IQ + +GK+++ G + +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87
Query: 478 ASHCAHK*PTAIRRGDGPIALVLAPTRELA 567
H+ P ALV+APTRELA
Sbjct: 88 LQRIDHEDPHVQ-------ALVMAPTRELA 110
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/87 (22%), Positives = 39/87 (44%)
Frame = +1
Query: 307 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPNGFRQNVGLHLASH 486
I F++ + + +G+ G+++P+ IQ + P + ++++ S
Sbjct: 25 IPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSIS- 83
Query: 487 CAHK*PTAIRRGDGPIALVLAPTRELA 567
T +R AL+L+PTRELA
Sbjct: 84 VLQSLDTQVRETQ---ALILSPTRELA 107
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 29.1 bits (62), Expect = 2.8
Identities = 25/109 (22%), Positives = 43/109 (39%), Gaps = 6/109 (5%)
Frame = +1
Query: 259 RNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN-LV 435
R + + G + N I F +++ + + ++P+PIQ Q P +N L
Sbjct: 109 RRTNRIFTWGDHLPNIILRFSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLA 168
Query: 436 GVPNGFRQNVGLHLAS-----HCAHK*PTAIRRGDGPIALVLAPTRELA 567
P G + + L + + +A+VL PTRELA
Sbjct: 169 SAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELA 217
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 73 RRIIAEFVASSKFGTTVSTAIIPI 2
+++I +FVA S G T+STA P+
Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 73 RRIIAEFVASSKFGTTVSTAIIPI 2
+++I +FVA S G T+STA P+
Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 446 TGSGKTLAYILPAIVH 493
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>U00031-8|AAK18869.1| 201|Caenorhabditis elegans Hypothetical
protein B0361.10 protein.
Length = 201
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 378 TDAHSSSRLADSYVWKEFSWRTKRVPAKRWP 470
TDA R+A S++ + T RVPA +WP
Sbjct: 83 TDAEYQQRVAMSFLGRVLDDFTTRVPATQWP 113
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/86 (22%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Frame = +1
Query: 316 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVPNGFRQNVGLHLASHCAH 495
F + + + + + +G+++ +Q +A+ KN++G G L
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIP-LVQ 149
Query: 496 K*PTAIRRGDG---PIALVLAPTREL 564
K + DG P A+++APT+EL
Sbjct: 150 KLIAESKTNDGSVGPSAVIIAPTKEL 175
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 27.5 bits (58), Expect = 8.6
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +2
Query: 446 TGSGKTLAYILPAIVHI 496
TGSGKTLA+++P ++ +
Sbjct: 782 TGSGKTLAFLIPFVIKL 798
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 27.5 bits (58), Expect = 8.6
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +2
Query: 446 TGSGKTLAYILPAIVHI 496
TGSGKTLA+++P ++ +
Sbjct: 782 TGSGKTLAFLIPFVIKL 798
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 27.5 bits (58), Expect = 8.6
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = +1
Query: 349 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVG-VPNGFRQNVGLHL-ASHCAHK*PTAIRRG 522
+G+K Y +PT IQ +++G ++VG G + + L + + + G
Sbjct: 89 EGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEALWRAKWSPDYG 148
Query: 523 DGPIALVLAPTRELA 567
G AL+++PTRELA
Sbjct: 149 LG--ALIISPTRELA 161
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,702,160
Number of Sequences: 27780
Number of extensions: 325445
Number of successful extensions: 1019
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 990
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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