Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20321
(765 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150; Eukary... 183 4e-45
UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15; Eukaryo... 165 1e-39
UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3; Fungi/... 150 3e-35
UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;... 107 2e-22
UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1; Encephal... 105 1e-21
UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus M... 101 3e-20
UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella... 100 8e-20
UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13; Archae... 99 1e-19
UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5; Archaea... 99 1e-19
UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15; Euryar... 93 7e-18
UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo... 92 1e-17
UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9; Euryarc... 89 1e-16
UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3; Euryarc... 82 1e-14
UniRef50_UPI00003C8539 Cluster: hypothetical protein Faci_030012... 76 8e-13
UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10; Archae... 72 2e-11
UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1; ... 52 2e-05
UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|R... 45 0.002
UniRef50_P19458 Cluster: Chloroplast 30S ribosomal protein S7; n... 44 0.003
UniRef50_P49495 Cluster: Chloroplast 30S ribosomal protein S7; n... 43 0.007
UniRef50_Q5AK02 Cluster: Likely mitochondrial ribosomal protein ... 42 0.013
UniRef50_O13744 Cluster: Mitochondrial ribosomal protein subunit... 39 0.12
UniRef50_Q97SQ4 Cluster: 30S ribosomal protein S7; n=211; Bacter... 39 0.12
UniRef50_Q06SG5 Cluster: Chloroplast 30S ribosomal protein S7; n... 38 0.27
UniRef50_Q6BRT2 Cluster: Similar to CA4785|IPF3361 Candida albic... 37 0.63
UniRef50_Q4P8U6 Cluster: Putative uncharacterized protein; n=1; ... 37 0.63
UniRef50_Q6FWL2 Cluster: Similarities with sp|P47150 Saccharomyc... 36 1.5
UniRef50_P12339 Cluster: Chloroplast 30S ribosomal protein S7; n... 34 4.4
UniRef50_A7TS76 Cluster: Putative uncharacterized protein; n=1; ... 33 5.9
UniRef50_Q9G879 Cluster: 30S ribosomal protein S7; n=1; Malawimo... 33 7.8
UniRef50_O96282 Cluster: Putative uncharacterized protein PFB095... 33 7.8
>UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150;
Eukaryota|Rep: 40S ribosomal protein S5 - Homo sapiens
(Human)
Length = 204
Score = 183 bits (446), Expect = 4e-45
Identities = 100/158 (63%), Positives = 108/158 (68%), Gaps = 1/158 (0%)
Frame = +1
Query: 244 KIFTHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGE 423
K HSAGRYA KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE
Sbjct: 47 KYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGE 106
Query: 424 NPLQVLVTAIINSGPREDSTRIGRAGTVLVKPLMFHPCAESTKQSGFCAQVHVRLHSEIL 603
NPLQVLV AIINSGPREDSTRIGRAGTV + + P + +
Sbjct: 107 NPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNI 166
Query: 604 KQSQSVLQMN*LMQLRGHL-TLRIKKKDELERVAKSNR 714
K L + +G + IKKKDELERVAKSNR
Sbjct: 167 KTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 204
Score = 68.9 bits (161), Expect = 1e-10
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = +2
Query: 131 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYL 253
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYL
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYL 49
>UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15;
Eukaryota|Rep: 40S ribosomal protein S5 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 197
Score = 165 bits (401), Expect = 1e-39
Identities = 88/155 (56%), Positives = 108/155 (69%), Gaps = 2/155 (1%)
Frame = +1
Query: 256 HSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQ 435
H+AGRY+ KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHA EIIHLLT +NP+Q
Sbjct: 44 HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQ 103
Query: 436 VLVTAIINSGPREDSTRIGRAGTVLVKPLMFHPCAESTKQSGFCAQVHVRLHS-EILKQS 612
V+V A++NSGPRED+TRIG AG V + + P Q+ + R + +K
Sbjct: 104 VIVDAVVNSGPREDATRIGSAGVVRRQAVDISP-LRRVNQAIYLLTTGAREAAFRNIKSI 162
Query: 613 QSVLQMN*LMQLRGHL-TLRIKKKDELERVAKSNR 714
L + +G + IKKKDE+ERVAK+NR
Sbjct: 163 AECLADELINAAKGSSNSYAIKKKDEIERVAKANR 197
Score = 43.2 bits (97), Expect = 0.007
Identities = 21/35 (60%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +2
Query: 152 EIKLFGRWSCYDVQVSDMSLQDYIS-VKEKYAKYL 253
E+KLF RWS DVQ+SD+SL DYI V K+A Y+
Sbjct: 8 EVKLFNRWSFDDVQLSDVSLIDYIGVVPSKHATYV 42
>UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3;
Fungi/Metazoa group|Rep: 40S ribosomal protein S5-B -
Schizosaccharomyces pombe (Fission yeast)
Length = 203
Score = 150 bits (364), Expect = 3e-35
Identities = 85/154 (55%), Positives = 99/154 (64%), Gaps = 1/154 (0%)
Frame = +1
Query: 256 HSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQ 435
H+AGR+ KRFRKA+C IVERLTNSLMM+GRNNGKKL+A RIVKHAFEII LLT +NPLQ
Sbjct: 50 HTAGRFQTKRFRKARCFIVERLTNSLMMNGRNNGKKLLATRIVKHAFEIIALLTDQNPLQ 109
Query: 436 VLVTAIINSGPREDSTRIGRAGTVLVKPLMFHPCAESTKQSGFCAQVHVRLHSEILKQSQ 615
VLV A+ GPREDSTRIG AGTV + + P + +K
Sbjct: 110 VLVDAVAACGPREDSTRIGSAGTVRRQAVDVSPLRRVNQALALITIGAREAAFRNVKSIS 169
Query: 616 SVLQMN*LMQLRGHL-TLRIKKKDELERVAKSNR 714
L + +G + IKKKDELERVAKSNR
Sbjct: 170 ECLAEEIINAAKGSSNSYAIKKKDELERVAKSNR 203
>UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 280
Score = 107 bits (258), Expect = 2e-22
Identities = 52/56 (92%), Positives = 53/56 (94%)
Frame = +3
Query: 498 GYSSRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNS 665
G RQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNS
Sbjct: 208 GTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNS 263
Score = 78.2 bits (184), Expect = 2e-13
Identities = 49/107 (45%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Frame = +1
Query: 397 EIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVLVKPLMFHPCAESTKQSGFCAQV 576
++ HLL +NPLQVLV AIINSGPREDSTRIGRAGTV + + P +
Sbjct: 174 QLQHLLLAQNPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTG 233
Query: 577 HVRLHSEILKQSQSVLQMN*LMQLRGHL-TLRIKKKDELERVAKSNR 714
+K L + +G + IKKKDELERVAKSNR
Sbjct: 234 AREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 280
>UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S5 -
Encephalitozoon cuniculi
Length = 208
Score = 105 bits (252), Expect = 1e-21
Identities = 62/159 (38%), Positives = 86/159 (54%), Gaps = 1/159 (0%)
Frame = +1
Query: 241 RKIFTHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTG 420
R I H+A KA+ PI ER SLM HGRN+GKK +A+ I + A IIH +T
Sbjct: 50 RGIVPHAATTITKGTTGKARIPIAERFVCSLMRHGRNSGKKRLAINIFEDACFIIHSMTK 109
Query: 421 ENPLQVLVTAIINSGPREDSTRIGRAGTVLVKPLMFHPCAE-STKQSGFCAQVHVRLHSE 597
+NPLQVLV AI+NSGPRED+ RIGRAG++ + P S S A +
Sbjct: 110 KNPLQVLVDAIVNSGPREDTARIGRAGSMRRTSVDVSPLKRISIAISNLSAGIRNASFRN 169
Query: 598 ILKQSQSVLQMN*LMQLRGHLTLRIKKKDELERVAKSNR 714
+ ++++ + + KK E+ER+A+SNR
Sbjct: 170 RITLAEAIANELIAASTNSQNSYAVNKKKEIERIAQSNR 208
>UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S7 -
Methanoregula boonei (strain 6A8)
Length = 204
Score = 101 bits (241), Expect = 3e-20
Identities = 58/158 (36%), Positives = 87/158 (55%), Gaps = 1/158 (0%)
Frame = +1
Query: 244 KIFTHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGE 423
+I HS G+++ + F KA IVERL N LM N GKK +A+ IV+ AFE+I+ T
Sbjct: 47 QIIPHSCGKFSRQEFNKANMMIVERLINRLMQTENNTGKKQLAIGIVRDAFELINKKTKR 106
Query: 424 NPLQVLVTAIINSGPREDSTRIGRAGTVLVKPLMFHPCAESTKQSGFCAQVHVRLHSEIL 603
NP++VLV AI N+GPRE++ R+ G + K + P GF A+ + +
Sbjct: 107 NPIEVLVEAIGNTGPREETVRLKYGGINVPKSVDTAPLRRVDSAIGFIAEAVWKSSRKSK 166
Query: 604 KQSQSVLQMN*LMQLRGHL-TLRIKKKDELERVAKSNR 714
K + ++L + +G + KK+E ER+AKS R
Sbjct: 167 KPASAILADELIAASKGDAKCYSVGKKEEKERIAKSAR 204
>UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella
natans|Rep: Ribosomal protein S5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 207
Score = 99.5 bits (237), Expect = 8e-20
Identities = 57/150 (38%), Positives = 86/150 (57%), Gaps = 12/150 (8%)
Frame = +1
Query: 205 VSAGLHFR*REVRKIFTHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIV 384
+S ++F ++ ++ HS+G Y K F+K CPI+ERL SLM+ RN+GKK+ + IV
Sbjct: 38 ISNYIYFN-KKYGELVPHSSGNYDKKPFKKTYCPILERLVCSLMLKSRNSGKKIKTIAIV 96
Query: 385 KHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAG-----TVLVKPL-----MFHP 534
KHAF ++H TG+NP+Q+LV AI N P EDS + +G V V P +
Sbjct: 97 KHAFYLLHKTTGKNPIQLLVDAISNCAPHEDSLMLSNSGQKKREAVDVSPYRKISQAIYF 156
Query: 535 CAESTKQSGF--CAQVHVRLHSEILKQSQS 618
A TK++ F + + LH EIL +++
Sbjct: 157 IAVGTKKAAFKNPKSISIALHDEILNAARN 186
Score = 61.7 bits (143), Expect = 2e-08
Identities = 26/56 (46%), Positives = 42/56 (75%)
Frame = +3
Query: 498 GYSSRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNS 665
G R+AVDVSP R+++QAI+ + G ++AAF+N K+I+ + DE++NAA+ S+ S
Sbjct: 135 GQKKREAVDVSPYRKISQAIYFIAVGTKKAAFKNPKSISIALHDEILNAARNSNTS 190
>UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13;
Archaea|Rep: 30S ribosomal protein S7P - Pyrobaculum
aerophilum
Length = 223
Score = 98.7 bits (235), Expect = 1e-19
Identities = 48/85 (56%), Positives = 59/85 (69%)
Frame = +1
Query: 247 IFTHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGEN 426
I H+ GRY + RF KA+ PIVERL N +M GRN GKK A IVK AF++I+ TG+N
Sbjct: 67 ILPHTEGRYQNTRFGKARIPIVERLINLMMRPGRNTGKKHKAYNIVKRAFDLIYYKTGKN 126
Query: 427 PLQVLVTAIINSGPREDSTRIGRAG 501
PLQV + AIIN+ PRE+ TRI G
Sbjct: 127 PLQVFIDAIINTAPREEITRIIMGG 151
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/56 (44%), Positives = 34/56 (60%)
Frame = +3
Query: 498 GYSSRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNS 665
G + +VDVSP RR++ A+ + GAR +F N K I EC+ADE+I AA S
Sbjct: 151 GIAYSVSVDVSPQRRLDLALRWITEGARACSFNNPKPIEECLADEIIAAAANDPKS 206
>UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5;
Archaea|Rep: 30S ribosomal protein S7P - Methanopyrus
kandleri
Length = 197
Score = 98.7 bits (235), Expect = 1e-19
Identities = 62/162 (38%), Positives = 93/162 (57%), Gaps = 9/162 (5%)
Frame = +1
Query: 256 HSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQ 435
H+ GR+A KRF KA+ PIVERL N +M +N GKK +A IVK AF+IIH TGENP+Q
Sbjct: 44 HTGGRHAKKRFAKAEVPIVERLINRVMRTEKNTGKKHLAYNIVKRAFDIIHERTGENPIQ 103
Query: 436 VLVTAIINSGPREDSTRIGRAGTVLVKPLMFHPCAESTKQSGFCAQVHVRLHSEILKQS- 612
VLV A+ N+ PRE++T T++ + +H +S+ Q + +RL +E +Q
Sbjct: 104 VLVQALENAAPREETT------TIIYGGISYHEAVDSSPQRRL--DIALRLITEGAQQRA 155
Query: 613 -------QSVLQMN*LMQLRGHLTLR-IKKKDELERVAKSNR 714
+ L + R I++K+E+ER+A++ R
Sbjct: 156 FRNPKPIEECLAEEIIAAARYDTECHSIRRKEEIERIAEAAR 197
Score = 53.6 bits (123), Expect = 5e-06
Identities = 26/51 (50%), Positives = 37/51 (72%)
Frame = +3
Query: 498 GYSSRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAK 650
G S +AVD SP RR++ A+ L+ GA++ AFRN K I EC+A+E+I AA+
Sbjct: 125 GISYHEAVDSSPQRRLDIALRLITEGAQQRAFRNPKPIEECLAEEIIAAAR 175
Score = 35.9 bits (79), Expect = 1.1
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 152 EIKLFGRWSCYDVQVSDMSLQDYISVKEKY 241
E+K+FG+W +V+V D L+DYI +K Y
Sbjct: 12 EMKVFGKWDPTEVEVRDPGLKDYICLKPMY 41
>UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Halobacterium salinarium (Halobacterium halobium)
Length = 210
Score = 93.1 bits (221), Expect = 7e-18
Identities = 42/82 (51%), Positives = 60/82 (73%)
Frame = +1
Query: 256 HSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQ 435
H+ GR+A K+F+K++ IVERL N LM G N GKK A++IV+ AF+I+H T ENP+Q
Sbjct: 57 HTMGRHAQKQFKKSEISIVERLANRLMKTGANAGKKQQALKIVRDAFDIVHERTDENPIQ 116
Query: 436 VLVTAIINSGPREDSTRIGRAG 501
VLV+A+ N+ PRE++ R+ G
Sbjct: 117 VLVSAVENAAPREETVRLKYGG 138
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/50 (46%), Positives = 31/50 (62%)
Frame = +3
Query: 498 GYSSRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAA 647
G S QAVD +P RRV+QA+ L GA A+F+ AE +A++L AA
Sbjct: 138 GISVPQAVDTAPQRRVDQALKFLADGAHSASFKTPTDAAEALANQLAGAA 187
>UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo
sapiens|Rep: Ribosomal protein S5 variant - Homo sapiens
(Human)
Length = 107
Score = 92.3 bits (219), Expect = 1e-17
Identities = 45/52 (86%), Positives = 46/52 (88%)
Frame = +1
Query: 295 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 450
AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE L LV A
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52
>UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanosarcina acetivorans
Length = 189
Score = 89.0 bits (211), Expect = 1e-16
Identities = 55/160 (34%), Positives = 87/160 (54%), Gaps = 4/160 (2%)
Frame = +1
Query: 247 IFTHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGEN 426
I HS+G++A ++F K++ IVERL N+LM N GKK + +R V+ AF+I++ T +N
Sbjct: 33 IVPHSSGKHARQQFNKSEISIVERLANNLMRTETNTGKKQVTLRAVEEAFDIVNKKTKQN 92
Query: 427 PLQVLVTAIINSGPREDSTRIGRAGTVLVKPLMFHPCAESTKQSGFCAQVHVRLHSEILK 606
P+QVLV AI N+GPRE+ R+ G + K + A + + + ++ K
Sbjct: 93 PIQVLVDAIANAGPREEVVRLKYGGISVPKAV---DTAPQRRVDTALRYISMGTNAAAFK 149
Query: 607 QSQSVLQMN*LMQL----RGHLTLRIKKKDELERVAKSNR 714
+SV + + R + I +KD ERVAK+ R
Sbjct: 150 SKRSVAECLATELIGAANRDTKSFSINRKDAKERVAKAAR 189
>UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanococcus vannielii
Length = 194
Score = 82.2 bits (194), Expect = 1e-14
Identities = 53/158 (33%), Positives = 79/158 (50%), Gaps = 2/158 (1%)
Frame = +1
Query: 247 IFTHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGEN 426
+ H+AGR + K F K + +VERL N LM N GKK + I++ A I+ T EN
Sbjct: 37 LIPHTAGRNSKKMFDKNKMHVVERLANKLMATQVNTGKKNEVLSIIEEALTIVENRTKEN 96
Query: 427 PLQVLVTAIINSGPREDSTRIGRAGTVLVKPLMFHPCAE-STKQSGFCAQVHVRLHSEIL 603
P+QV+V A+ NSGPRE++TRI G ++ + P T H
Sbjct: 97 PIQVVVDALENSGPREETTRISYGGIAFLQSVDVSPSRRLDTAFRNISLGASQGAHKSKK 156
Query: 604 KQSQSVL-QMN*LMQLRGHLTLRIKKKDELERVAKSNR 714
+Q + ++ + + +KKK+E ERVA+S R
Sbjct: 157 SIAQCLADELVAASKADMQKSFAVKKKEEKERVAQSAR 194
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/51 (45%), Positives = 36/51 (70%)
Frame = +3
Query: 498 GYSSRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAK 650
G + Q+VDVSP RR++ A + GA + A ++ K+IA+C+ADEL+ A+K
Sbjct: 121 GIAFLQSVDVSPSRRLDTAFRNISLGASQGAHKSKKSIAQCLADELVAASK 171
>UniRef50_UPI00003C8539 Cluster: hypothetical protein Faci_03001272;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001272 - Ferroplasma acidarmanus fer1
Length = 182
Score = 76.2 bits (179), Expect = 8e-13
Identities = 50/153 (32%), Positives = 77/153 (50%), Gaps = 1/153 (0%)
Frame = +1
Query: 259 SAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQV 438
+ GR+++ K +ERL N+LM + GKK A +++ AF+II T +NP+Q+
Sbjct: 30 TGGRFSNYLSGKRNVNTIERLLNNLMRTEKWTGKKYSAYKVMSQAFDIIATKTKQNPVQI 89
Query: 439 LVTAIINSGPREDSTRIGRAGTVLVKPLMFHPCAESTKQSGFCAQVHVRLHSEILKQSQS 618
LV+AI NS PRE+ TR+ G + K + P + A+ + + Q
Sbjct: 90 LVSAIENSAPREEVTRLKYGGIAVPKSVDVSPSRRLDEALRNIARGATKASFKHKIHIQD 149
Query: 619 VLQMN*LMQLRGHL-TLRIKKKDELERVAKSNR 714
L L+ R + I KK+E+ERVA S R
Sbjct: 150 CLANEILLAARNDANSFAISKKEEIERVAASAR 182
>UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10;
Archaea|Rep: 30S ribosomal protein S7P - Pyrococcus
horikoshii
Length = 218
Score = 71.7 bits (168), Expect = 2e-11
Identities = 53/174 (30%), Positives = 82/174 (47%), Gaps = 17/174 (9%)
Frame = +1
Query: 244 KIFTHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRN----------------NGKKLMAV 375
++ H+ GR+A K F KA IVERL N +M G + N KK+ A
Sbjct: 45 RLLPHTHGRHAKKHFGKANVHIVERLINKVMRSGGSHYKVAGHFMRREHRSLNSKKVRAY 104
Query: 376 RIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVLVKPLMFHPCAE-STK 552
+VK AF+II TG+NP+QVLV AI N+ PRED+T + G + P
Sbjct: 105 EVVKEAFKIIEKRTGKNPIQVLVWAIENAAPREDTTSVMFGGIRYHVAVDISPLRRLDVA 164
Query: 553 QSGFCAQVHVRLHSEILKQSQSVLQMN*LMQLRGHLTLRIKKKDELERVAKSNR 714
+ + + ++++ + L + + KK E+ER+A+S+R
Sbjct: 165 LRNIALGASAKCYRTKMSFAEALAEEIILAANKDPKSYAYSKKLEIERIAESSR 218
Score = 39.5 bits (88), Expect = 0.089
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +3
Query: 516 AVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNS 665
AVD+SPLRR++ A+ + GA +R + AE +A+E+I AA S
Sbjct: 152 AVDISPLRRLDVALRNIALGASAKCYRTKMSFAEALAEEIILAANKDPKS 201
Score = 36.7 bits (81), Expect = 0.63
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +2
Query: 152 EIKLFGRWSCYDVQVSDMSLQDYISVKEK 238
EIK+ GRWS DV+V D SL+ YI+++ +
Sbjct: 17 EIKVMGRWSTEDVEVKDPSLKPYINLEPR 45
>UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 77
Score = 52.0 bits (119), Expect = 2e-05
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = +2
Query: 62 MAEENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYIS 226
M+E D+ E V E + Q A++P+IKLFGRWS D+ +SD+S+ DYI+
Sbjct: 1 MSEVEAFDNFEEEQPQVFEQAPVVQPAELPDIKLFGRWSSDDIHISDISVSDYIA 55
Score = 33.1 bits (72), Expect = 7.8
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 670 IKKKDELERVAKSNR 714
IKKKDELERVAKSNR
Sbjct: 63 IKKKDELERVAKSNR 77
>UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|Rep:
ORFD 65 - Desulfurococcus mobilis
Length = 65
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/46 (50%), Positives = 29/46 (63%)
Frame = -2
Query: 401 ISNACLTIRTAISFLPLFRPCIIREFVRRSTIGHWALRKRLCAYLP 264
+S A LT+ A FLP+F P I F+ ST+G W L KRLC+ LP
Sbjct: 1 MSKAFLTMWYARCFLPMFLPGRITLFISLSTMGTWVLPKRLCSCLP 46
>UniRef50_P19458 Cluster: Chloroplast 30S ribosomal protein S7;
n=22; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S7 - Guillardia theta (Cryptomonas phi)
Length = 156
Score = 44.4 bits (100), Expect = 0.003
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 2/135 (1%)
Frame = +1
Query: 316 RLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPRED--STRI 489
RL N L + GKK +A RI+ +AF+II TGE+ + V +AI P + + RI
Sbjct: 21 RLVNMLTVRILKEGKKHLAQRIIYNAFDIIKQRTGEDAILVFESAIKKVTPLVEVKARRI 80
Query: 490 GRAGTVLVKPLMFHPCAESTKQSGFCAQVHVRLHSEILKQSQSVLQMN*LMQLRGHLTLR 669
G G+ P+ + + + + + E +S S+ N +M
Sbjct: 81 G--GSTYQVPME----VRAFRGTNLALRWITKYARERAGKSMSMKLANEIMDAANETGSS 134
Query: 670 IKKKDELERVAKSNR 714
I+K++E+ R+A++N+
Sbjct: 135 IRKREEIHRMAEANK 149
>UniRef50_P49495 Cluster: Chloroplast 30S ribosomal protein S7; n=1;
Odontella sinensis|Rep: Chloroplast 30S ribosomal
protein S7 - Odontella sinensis (Marine centric diatom)
Length = 158
Score = 43.2 bits (97), Expect = 0.007
Identities = 26/63 (41%), Positives = 34/63 (53%)
Frame = +1
Query: 280 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIIN 459
KRF +A L + L+ +GKK +A IV AFEII + T E+PL V AI N
Sbjct: 9 KRFPEADSTYNSYLVSLLITRILKSGKKNLAQNIVNAAFEIIKVKTNEDPLVVFERAIRN 68
Query: 460 SGP 468
+ P
Sbjct: 69 ASP 71
>UniRef50_Q5AK02 Cluster: Likely mitochondrial ribosomal protein S7;
n=3; Saccharomycetales|Rep: Likely mitochondrial
ribosomal protein S7 - Candida albicans (Yeast)
Length = 251
Score = 42.3 bits (95), Expect = 0.013
Identities = 23/67 (34%), Positives = 36/67 (53%)
Frame = +1
Query: 268 RYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVT 447
+YA+K+ P V+ LTN +M H GKK A ++V A I+ L ++P++VL
Sbjct: 105 KYANKKIPLRSDPTVDNLTNLIMRH----GKKAKAQKVVSRALYIVQLKLRKDPIEVLRE 160
Query: 448 AIINSGP 468
+ GP
Sbjct: 161 TLDKLGP 167
>UniRef50_O13744 Cluster: Mitochondrial ribosomal protein subunit
S7; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S7 - Schizosaccharomyces pombe
(Fission yeast)
Length = 259
Score = 39.1 bits (87), Expect = 0.12
Identities = 39/137 (28%), Positives = 57/137 (41%)
Frame = +1
Query: 310 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 489
V+ L N +M +GKK A +IV A II TGENP+ VL AI P
Sbjct: 126 VQHLVNLIM----RDGKKAKAEKIVATALSIIQKETGENPIDVLKQAIAEISPLMKLVSA 181
Query: 490 GRAGTVLVKPLMFHPCAESTKQSGFCAQVHVRLHSEILKQSQSVLQMN*LMQLRGHLTLR 669
R + P+ P E ++ + S K+ + + ++ +R +
Sbjct: 182 KRFNKSVEFPM---PLKERQRRRIALQWILGECKSSSPKRLSDRI-VKEIIAIRSKTSNC 237
Query: 670 IKKKDELERVAKSNR*N 720
KKKD L R+ NR N
Sbjct: 238 FKKKDHLHRMCLVNRGN 254
>UniRef50_Q97SQ4 Cluster: 30S ribosomal protein S7; n=211;
Bacteria|Rep: 30S ribosomal protein S7 - Streptococcus
pneumoniae
Length = 156
Score = 39.1 bits (87), Expect = 0.12
Identities = 36/136 (26%), Positives = 62/136 (45%)
Frame = +1
Query: 307 IVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTR 486
+V RL N +M+ +GK+ A IV AFE I TG + L+V TA+ N P +
Sbjct: 22 LVTRLINRVML----DGKRGTAASIVYGAFEQIKEATGNDALEVFETAMENIMPVLEVRA 77
Query: 487 IGRAGTVLVKPLMFHPCAESTKQSGFCAQVHVRLHSEILKQSQSVLQMN*LMQLRGHLTL 666
G+ P+ P +T + + RL E Q + + ++ +
Sbjct: 78 RRVGGSNYQVPVKVRPERRTTLGLRWLVTI-ARLRGEHTMQDRLAKE---ILDAANNTGA 133
Query: 667 RIKKKDELERVAKSNR 714
+KK+++ R+A++NR
Sbjct: 134 AVKKREDTHRMAEANR 149
>UniRef50_Q06SG5 Cluster: Chloroplast 30S ribosomal protein S7; n=3;
Chlorophyceae|Rep: Chloroplast 30S ribosomal protein S7
- Stigeoclonium helveticum (Green alga)
Length = 174
Score = 37.9 bits (84), Expect = 0.27
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +1
Query: 304 PIVERLTNSLMMHG-RNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDS 480
PI +++ ++++ NGKK +A RIV F I +NP++V A+ N PR +
Sbjct: 16 PIYNKVSVHMLVNRILKNGKKSIAYRIVYSVFRKISETMNQNPVEVWEKALNNVKPRVEV 75
Query: 481 TRIGRAGTVLVKPLMFHPCAESTK 552
RAG++ P + P AE +
Sbjct: 76 KPRRRAGSIQQVPRVM-PSAERAR 98
>UniRef50_Q6BRT2 Cluster: Similar to CA4785|IPF3361 Candida albicans
IPF3361; n=2; Saccharomycetaceae|Rep: Similar to
CA4785|IPF3361 Candida albicans IPF3361 - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 263
Score = 36.7 bits (81), Expect = 0.63
Identities = 22/77 (28%), Positives = 40/77 (51%)
Frame = +1
Query: 271 YAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 450
+A+KR P ++ TN +M +GKK A +I+ A I++L T ++PL +L
Sbjct: 118 FANKRIPLPSNPTIDNFTNLIM----RDGKKSKAQKILSRALYIVYLKTRKDPLVILEET 173
Query: 451 IINSGPREDSTRIGRAG 501
+ P +T++ + G
Sbjct: 174 LDKMAPLM-ATKVQKTG 189
>UniRef50_Q4P8U6 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 299
Score = 36.7 bits (81), Expect = 0.63
Identities = 37/139 (26%), Positives = 57/139 (41%)
Frame = +1
Query: 304 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDST 483
P +E LTN LM +GKK A R + II +T NPL ++ AI + P
Sbjct: 164 PTLEFLTNLLM----KDGKKAQAQRFITRTLSIISSVTNSNPLPLIHDAIYKAAPLVKVQ 219
Query: 484 RIGRAGTVLVKPLMFHPCAESTKQSGFCAQVHVRLHSEILKQSQSVLQMN*LMQLRGHLT 663
+ G L P+ + K + + + L++ L L + G +
Sbjct: 220 SKKQGGKSLQVPVALTQRQSTRKALTWIIEASKKRPDRELERR---LAAEFLAVVEG-TS 275
Query: 664 LRIKKKDELERVAKSNR*N 720
I KK+E ++A NR N
Sbjct: 276 SAIVKKEEQHKIATVNRAN 294
>UniRef50_Q6FWL2 Cluster: Similarities with sp|P47150 Saccharomyces
cerevisiae YJR113c RSM7; n=2; Saccharomycetales|Rep:
Similarities with sp|P47150 Saccharomyces cerevisiae
YJR113c RSM7 - Candida glabrata (Yeast) (Torulopsis
glabrata)
Length = 274
Score = 35.5 bits (78), Expect = 1.5
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +1
Query: 304 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 468
P V+ +TN +M H GKK A +I+ A +H T ++P+++L A+ + P
Sbjct: 139 PTVQHVTNMIMRH----GKKDRAQKIISRALYFLHCKTRKDPVELLKKALDDMAP 189
>UniRef50_P12339 Cluster: Chloroplast 30S ribosomal protein S7;
n=94; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S7 - Zea mays (Maize)
Length = 156
Score = 33.9 bits (74), Expect = 4.4
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +1
Query: 274 AHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 453
A KR K+ RL N ++ +GKK +A +I+ A + I T NPL VL AI
Sbjct: 7 AEKRTAKSDPIFRNRLVNMVVNRIMKDGKKSLAYQILYRAVKKIQQKTETNPLLVLRQAI 66
Query: 454 INSGPRED-STRIGRAGTVLVKPL 522
P TR + G+ P+
Sbjct: 67 RRVTPNIGVKTRRNKKGSTRKVPI 90
>UniRef50_A7TS76 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 589
Score = 33.5 bits (73), Expect = 5.9
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Frame = +1
Query: 313 ERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENP--LQVLVTAIINSGPREDSTR 486
ER ++ L+ + +K + V++ KH FEI+H + G P + VL T +++S R+ +
Sbjct: 477 ERNSSKLLSQRQKQYQKFLHVKM-KHVFEILHSIEGNKPYTMTVLSTLVVDS-LRDGNNP 534
Query: 487 IG--RAGTVLVK 516
IG A +L+K
Sbjct: 535 IGTSEAQEILLK 546
>UniRef50_Q9G879 Cluster: 30S ribosomal protein S7; n=1; Malawimonas
jakobiformis|Rep: 30S ribosomal protein S7 - Malawimonas
jakobiformis
Length = 151
Score = 33.1 bits (72), Expect = 7.8
Identities = 36/137 (26%), Positives = 57/137 (41%)
Frame = +1
Query: 304 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDST 483
PI+ +L N LM G K +IV + E+I T + PL ++ AI N P +
Sbjct: 16 PIISKLINVLM----KKGNKSKIEKIVYKSLELIKKNTKKTPLTIIKKAISNIKPSVELK 71
Query: 484 RIGRAGTVLVKPLMFHPCAESTKQSGFCAQVHVRLHSEILKQSQSVLQMN*LMQLRGHLT 663
I A P + + + V SE ++ L++ Q +G+
Sbjct: 72 SIKIAAKSYQIPFEISLKRQQNLAIRWLVE-SVNNRSEKELTNRLYLEILNAYQQKGNA- 129
Query: 664 LRIKKKDELERVAKSNR 714
KKKD++ A+SNR
Sbjct: 130 --FKKKDDIHHKAESNR 144
>UniRef50_O96282 Cluster: Putative uncharacterized protein PFB0950w;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFB0950w - Plasmodium falciparum
(isolate 3D7)
Length = 307
Score = 33.1 bits (72), Expect = 7.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 647 SCIN*FICNTLCDCFNISECSLTCTCAQKPDCLVDSA 537
SCI IC+ +C C I C +C C+ C+ SA
Sbjct: 215 SCICSCICSCICTCTCICSCLCSCICSCVCSCVCSSA 251
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 742,820,800
Number of Sequences: 1657284
Number of extensions: 14826491
Number of successful extensions: 36857
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 34860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36731
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63792713725
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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