Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20318
(598 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 182 1e-46
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 182 1e-46
SB_56| Best HMM Match : Actin (HMM E-Value=0) 182 1e-46
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 182 1e-46
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 182 1e-46
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 111 5e-25
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 98 4e-21
SB_54| Best HMM Match : Actin (HMM E-Value=0) 84 9e-17
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 65 5e-11
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 61 6e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 60 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 51 6e-07
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 51 6e-07
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.019
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 36 0.025
SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7) 32 0.31
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 32 0.40
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 31 0.53
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.53
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 31 0.71
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 31 0.71
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 31 0.71
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 31 0.93
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 29 2.9
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 29 2.9
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 29 2.9
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 29 2.9
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 29 2.9
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 29 2.9
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 29 2.9
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 29 2.9
SB_36120| Best HMM Match : zf-MIZ (HMM E-Value=3.9) 29 3.8
SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0) 29 3.8
SB_15607| Best HMM Match : zf-MIZ (HMM E-Value=3.9) 29 3.8
SB_59500| Best HMM Match : RVT_1 (HMM E-Value=0.015) 29 3.8
SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0) 29 3.8
SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0) 29 3.8
SB_48166| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_23472| Best HMM Match : HIT (HMM E-Value=0.43) 28 5.0
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_18966| Best HMM Match : RVT_1 (HMM E-Value=0.028) 28 5.0
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_49798| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32) 28 5.0
SB_12041| Best HMM Match : PHD (HMM E-Value=0.001) 28 5.0
SB_12008| Best HMM Match : RVT_1 (HMM E-Value=0) 28 5.0
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 28 6.6
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 28 6.6
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 182 bits (444), Expect = 1e-46
Identities = 82/84 (97%), Positives = 83/84 (98%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKT 435
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 436 NREKMTQIMFETFNTPAMYVAIQA 507
NREKMTQIMFETFN+PAMYVAIQA
Sbjct: 116 NREKMTQIMFETFNSPAMYVAIQA 139
Score = 112 bits (270), Expect = 2e-25
Identities = 51/54 (94%), Positives = 53/54 (98%)
Frame = +2
Query: 92 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
Score = 61.7 bits (143), Expect = 4e-10
Identities = 27/29 (93%), Positives = 29/29 (100%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVSHTVPIYEG 596
LSLYASGRTTGIV+DSGDGV+HTVPIYEG
Sbjct: 141 LSLYASGRTTGIVMDSGDGVTHTVPIYEG 169
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 182 bits (444), Expect = 1e-46
Identities = 82/84 (97%), Positives = 83/84 (98%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKT 435
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK
Sbjct: 55 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 114
Query: 436 NREKMTQIMFETFNTPAMYVAIQA 507
NREKMTQIMFETFN+PAMYVAIQA
Sbjct: 115 NREKMTQIMFETFNSPAMYVAIQA 138
Score = 109 bits (263), Expect = 1e-24
Identities = 49/52 (94%), Positives = 52/52 (100%)
Frame = +2
Query: 98 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 53
Score = 61.7 bits (143), Expect = 4e-10
Identities = 27/29 (93%), Positives = 29/29 (100%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVSHTVPIYEG 596
LSLYASGRTTGIV+DSGDGV+HTVPIYEG
Sbjct: 140 LSLYASGRTTGIVMDSGDGVTHTVPIYEG 168
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 182 bits (444), Expect = 1e-46
Identities = 82/84 (97%), Positives = 83/84 (98%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKT 435
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK
Sbjct: 55 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 114
Query: 436 NREKMTQIMFETFNTPAMYVAIQA 507
NREKMTQIMFETFN+PAMYVAIQA
Sbjct: 115 NREKMTQIMFETFNSPAMYVAIQA 138
Score = 111 bits (266), Expect = 5e-25
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +2
Query: 98 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 53
Score = 61.7 bits (143), Expect = 4e-10
Identities = 27/29 (93%), Positives = 29/29 (100%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVSHTVPIYEG 596
LSLYASGRTTGIV+DSGDGV+HTVPIYEG
Sbjct: 140 LSLYASGRTTGIVMDSGDGVTHTVPIYEG 168
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 182 bits (444), Expect = 1e-46
Identities = 82/84 (97%), Positives = 83/84 (98%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKT 435
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 436 NREKMTQIMFETFNTPAMYVAIQA 507
NREKMTQIMFETFN+PAMYVAIQA
Sbjct: 116 NREKMTQIMFETFNSPAMYVAIQA 139
Score = 117 bits (281), Expect = 8e-27
Identities = 52/54 (96%), Positives = 54/54 (100%)
Frame = +2
Query: 92 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
Score = 61.7 bits (143), Expect = 4e-10
Identities = 27/29 (93%), Positives = 29/29 (100%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVSHTVPIYEG 596
LSLYASGRTTGIV+DSGDGV+HTVPIYEG
Sbjct: 141 LSLYASGRTTGIVMDSGDGVTHTVPIYEG 169
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 182 bits (444), Expect = 1e-46
Identities = 82/84 (97%), Positives = 83/84 (98%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKT 435
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 436 NREKMTQIMFETFNTPAMYVAIQA 507
NREKMTQIMFETFN+PAMYVAIQA
Sbjct: 116 NREKMTQIMFETFNSPAMYVAIQA 139
Score = 112 bits (270), Expect = 2e-25
Identities = 49/54 (90%), Positives = 53/54 (98%)
Frame = +2
Query: 92 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVSHTVPIYE 593
LSLYASGRTTGIV+DSGDGVSHTVPIYE
Sbjct: 141 LSLYASGRTTGIVMDSGDGVSHTVPIYE 168
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 111 bits (266), Expect = 5e-25
Identities = 49/52 (94%), Positives = 52/52 (100%)
Frame = +2
Query: 98 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 53
Score = 74.5 bits (175), Expect = 6e-14
Identities = 33/36 (91%), Positives = 33/36 (91%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 363
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 55 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 61.7 bits (143), Expect = 4e-10
Identities = 27/29 (93%), Positives = 29/29 (100%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVSHTVPIYEG 596
LSLYASGRTTGIV+DSGDGV+HTVPIYEG
Sbjct: 103 LSLYASGRTTGIVMDSGDGVTHTVPIYEG 131
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/25 (76%), Positives = 22/25 (88%)
Frame = +1
Query: 433 TNREKMTQIMFETFNTPAMYVAIQA 507
TN + M +IMFETFN+PAMYVAIQA
Sbjct: 77 TNWDDMEKIMFETFNSPAMYVAIQA 101
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 98.3 bits (234), Expect = 4e-21
Identities = 45/99 (45%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Frame = +1
Query: 214 SGRDGRYGTEGLL*GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPE 390
S + G + L+ GDEA R +L + YP+++GIV NWDDM+ +W +TF +++ + P
Sbjct: 44 SQKVGDIEVKDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPR 103
Query: 391 EHPVLLTEAPLNPKTNREKMTQIMFETFNTPAMYVAIQA 507
VLLTE PLNP NREKM ++MFE + +Y+AIQA
Sbjct: 104 NTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAIQA 142
Score = 48.4 bits (110), Expect = 4e-06
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVSHTVPIYEG 596
L+LYA G TG+V+DSGDGV+H P+YEG
Sbjct: 144 LTLYAQGLLTGVVIDSGDGVTHICPVYEG 172
Score = 44.4 bits (100), Expect = 7e-05
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +2
Query: 110 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 208
+ +V DNG+G K G+AG + P +FPS+VGRP
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 83.8 bits (198), Expect = 9e-17
Identities = 37/55 (67%), Positives = 45/55 (81%)
Frame = +1
Query: 343 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKTNREKMTQIMFETFNTPAMYVAIQA 507
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QA
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQA 2183
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +2
Query: 116 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 217
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
Score = 54.4 bits (125), Expect = 7e-08
Identities = 22/29 (75%), Positives = 26/29 (89%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVSHTVPIYEG 596
++LYASGRTTG V D GDGVSHTVP+Y+G
Sbjct: 2185 MALYASGRTTGTVFDCGDGVSHTVPVYDG 2213
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 64.9 bits (151), Expect = 5e-11
Identities = 25/39 (64%), Positives = 34/39 (87%)
Frame = +1
Query: 391 EHPVLLTEAPLNPKTNREKMTQIMFETFNTPAMYVAIQA 507
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QA
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQA 164
Score = 59.3 bits (137), Expect = 2e-09
Identities = 25/29 (86%), Positives = 29/29 (100%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVSHTVPIYEG 596
LSLYA+GRTTG+VLD+GDGVSH+VPIYEG
Sbjct: 166 LSLYATGRTTGVVLDAGDGVSHSVPIYEG 194
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 61.3 bits (142), Expect = 6e-10
Identities = 24/65 (36%), Positives = 42/65 (64%)
Frame = +1
Query: 301 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKTNREKMTQIMFETFNT 480
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 481 PAMYV 495
PA ++
Sbjct: 63 PAFFL 67
Score = 33.5 bits (73), Expect = 0.13
Identities = 13/31 (41%), Positives = 23/31 (74%)
Frame = +3
Query: 504 SRLSLYASGRTTGIVLDSGDGVSHTVPIYEG 596
S L+ +A+GR+ G+V+DSG + VP+++G
Sbjct: 71 SVLTAFANGRSNGLVIDSGATQTSAVPVHDG 101
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 217
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/29 (89%), Positives = 27/29 (93%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVSHTVPIYEG 596
LSLYASGRTTG+V DSGDGVSH VPIYEG
Sbjct: 19 LSLYASGRTTGVVFDSGDGVSHNVPIYEG 47
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +1
Query: 457 IMFETFNTPAMYVAIQA 507
IMFE FN+PA+YVAIQA
Sbjct: 1 IMFEAFNSPAVYVAIQA 17
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +2
Query: 86 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 232
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
Score = 34.3 bits (75), Expect = 0.076
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVSHTVPIYEG 596
LSLYASG T G+ L SG + IYEG
Sbjct: 770 LSLYASGMTLGVCLSSGFSCTQAAVIYEG 798
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 51.2 bits (117), Expect = 6e-07
Identities = 24/51 (47%), Positives = 29/51 (56%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 408
GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 287 GDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.31
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 537 TGIVLDSGDGVSHTVPI 587
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -1
Query: 214 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 98
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 36.3 bits (80), Expect = 0.019
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +1
Query: 217 GRDGRYGTEGLL*GDEAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-- 387
GR G + GL G++ S I L+ P + +VT+++ E++ H F + P
Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164
Query: 388 EEHPVLLTEAPLNPKTNRE 444
HPV++TE NP R+
Sbjct: 165 VNHPVIMTEPVCNPNYCRQ 183
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 35.9 bits (79), Expect = 0.025
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +3
Query: 537 TGIVLDSGDGVSHTVPIYEG 596
TG V+DSGDGV+H +P+ EG
Sbjct: 62 TGCVIDSGDGVTHVIPVAEG 81
>SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7)
Length = 186
Score = 32.3 bits (70), Expect = 0.31
Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Frame = -3
Query: 395 CSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASS--PHKSPSVPYRPS 222
CS + + C + ++V CS + V + ++C+ PH+ PS
Sbjct: 88 CSPSRAHVDVFPITCSCRCVPHRMVMSMCSPSRVYVDVSPIVCSCRCVPHRVLMSMCSPS 147
Query: 221 RPDGGAFPRSRGTRREEHHLLRNRPCTYRSH 129
R D FP + R HH+L + + R+H
Sbjct: 148 RADVDVFPITCSRRCVFHHVLMSMCSSSRAH 178
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 31.9 bits (69), Expect = 0.40
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +1
Query: 256 GDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 372
GD+ + + L Y P + G + NWD ++IW +TF E
Sbjct: 275 GDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/54 (31%), Positives = 32/54 (59%)
Frame = +2
Query: 104 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYEEMR 265
++A LV+D G+ K GFA + APR++ P+ + + + + + +G D EE +
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSERRKLFIG--DQIEECK 282
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.53
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 189 GNTARGASSPAKPALHIPEPLSTT 118
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 31.5 bits (68), Expect = 0.53
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -1
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 213 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.53
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 189 GNTARGASSPAKPALHIPEPLSTT 118
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 31.1 bits (67), Expect = 0.71
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -1
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 408 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 31.1 bits (67), Expect = 0.71
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -1
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 271 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 31.1 bits (67), Expect = 0.71
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -1
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 249 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 31.1 bits (67), Expect = 0.71
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -1
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 31.1 bits (67), Expect = 0.71
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -1
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 31.1 bits (67), Expect = 0.71
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -1
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 125 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 30.7 bits (66), Expect = 0.93
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -1
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ ++LSH + H M D +HG RS SCET L T
Sbjct: 173 LTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 189 GNTARGASSPAKPALHIPEPLSTT 118
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -1
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 242 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 29.1 bits (62), Expect = 2.9
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Frame = +1
Query: 358 TFYNELRVAPE----EHPVLLTEAPLNPKTNREKMTQIMFETFNTPAMYVAIQAGSRCTR 525
T +E VAP+ L E + P+T + + ET P VA + +
Sbjct: 487 TVASETTVAPKTTAASEATLAPETTVAPETTAAPESTLALETTAAPVTTVAPETTAAPDT 546
Query: 526 PVVPPVSCWTPATVSP--TPCPST 591
P+VP + +TV+P T P T
Sbjct: 547 PIVPETTVALESTVAPEITVVPET 570
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -1
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -1
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 1641 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -1
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 669 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -1
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 224 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -1
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 1079 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -1
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 22 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 29.1 bits (62), Expect = 2.9
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Frame = +1
Query: 370 ELRVAPEEHPVL-LTEAP---LNPKTNREKMTQIMFETFNTPAMYVAIQAGSRCTRPVVP 537
E APE V T AP + P+T +T + ET PA A++ + +VP
Sbjct: 1323 ETSAAPETTMVPETTSAPSTTMAPETTAAPVTTMAPETTAVPATIAALETTATLETTMVP 1382
Query: 538 PVSCWTPATVSP--TPCPST 591
+ + TV+P T P+T
Sbjct: 1383 ETTASSETTVAPETTDAPAT 1402
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -1
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_36120| Best HMM Match : zf-MIZ (HMM E-Value=3.9)
Length = 209
Score = 28.7 bits (61), Expect = 3.8
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = -1
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 110
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 93 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 151
Query: 109 NFFVAHLELVK 77
V L+ K
Sbjct: 152 QVDVLLLDFQK 162
>SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 522
Score = 28.7 bits (61), Expect = 3.8
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = -1
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 110
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 93 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 151
Query: 109 NFFVAHLELVK 77
V L+ K
Sbjct: 152 QVDVLLLDFQK 162
>SB_15607| Best HMM Match : zf-MIZ (HMM E-Value=3.9)
Length = 221
Score = 28.7 bits (61), Expect = 3.8
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = -1
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 110
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 126 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 184
Query: 109 NFFVAHLELVK 77
V L+ K
Sbjct: 185 QVDVLLLDFQK 195
>SB_59500| Best HMM Match : RVT_1 (HMM E-Value=0.015)
Length = 224
Score = 28.7 bits (61), Expect = 3.8
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = -1
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 110
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 43 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 101
Query: 109 NFFVAHLELVK 77
V L+ K
Sbjct: 102 QVDVLLLDFQK 112
>SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 885
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = -1
Query: 262 HLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 146
H++ + ++SH +HH ++ + +HG R + SCE+ L
Sbjct: 470 HIITKNIVSHLEHHDILY-----KFQHGFRKLRSCESQL 503
>SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1676
Score = 28.7 bits (61), Expect = 3.8
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = -1
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 110
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 715 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 773
Query: 109 NFFVAHLELVK 77
V L+ K
Sbjct: 774 QVDVLLLDFQK 784
>SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1176
Score = 28.7 bits (61), Expect = 3.8
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = -1
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 110
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 799 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 857
Query: 109 NFFVAHLELVK 77
V L+ K
Sbjct: 858 QVDVLLLDFQK 868
>SB_48166| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
Frame = +1
Query: 442 EKMTQIMFETFNTPAMYVAIQ----AGSRCTRPVVPP-VSCWTPATVSPTPC 582
+K T + F TP++ G T P VPP V+ P T +P PC
Sbjct: 188 DKQTDVCHLIFPTPSLGTQAPPPSTGGVTLTTPTVPPRVASTEPTTFTPKPC 239
>SB_23472| Best HMM Match : HIT (HMM E-Value=0.43)
Length = 168
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 262 HLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 44 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 80
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 189 GNTARGASSPAKPALHIPEPLSTT 118
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_18966| Best HMM Match : RVT_1 (HMM E-Value=0.028)
Length = 252
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 262 HLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 89 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 125
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 189 GNTARGASSPAKPALHIPEPLSTT 118
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_49798| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1137
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 409 TEAPLNPKTNREKMTQIMFETFNTPAMYVAIQ 504
T +P +P N +K T FET NTP + +A +
Sbjct: 444 TASPRHPTNNTDKATH-KFETRNTPTLSIATE 474
>SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1134
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 262 HLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 673 HIIFHDIMNHIDTHNILV-----KFQHGFRRFFSCETQLITT 709
>SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32)
Length = 698
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 262 HLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 292 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 328
>SB_12041| Best HMM Match : PHD (HMM E-Value=0.001)
Length = 560
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 262 HLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 503 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 539
>SB_12008| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 979
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 262 HLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 129 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 165
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 27.9 bits (59), Expect = 6.6
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = -1
Query: 274 CSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRGNF 104
C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 465 CLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHGQV 523
Query: 103 FVAHLELVK 77
V L+ K
Sbjct: 524 DVLLLDFQK 532
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 27.9 bits (59), Expect = 6.6
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +1
Query: 409 TEAP---LNPKTNREKMTQIMFETFNTPAMYVAIQAGSRCTRPVVPPVSCWTPATVSPTP 579
T+AP L PKT T + ET + PA+ +A + + V P + TV+P
Sbjct: 515 TDAPATTLAPKTTIAPETTVAQETTDAPAITMAPETSAAPETTVAPETNAAPETTVAPEI 574
Query: 580 CPSTK 594
+T+
Sbjct: 575 TAATE 579
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +1
Query: 451 TQIMFETFNTPAMYVAIQAGSRCTRPVVPPVSCWTPATVSPTP 579
+Q+ E +N P+ + + CT +P +TP T TP
Sbjct: 611 SQVNSERYNAPSQSPCTERYTPCTERYIPCTERYTPCTERYTP 653
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -2
Query: 204 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 94
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 27.5 bits (58), Expect = 8.7
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 6/80 (7%)
Frame = +1
Query: 370 ELRVAPE--EHP--VLLTEAPLNPKTNREKMTQIMFETFNTPAMYVAIQAGSRCTRPVVP 537
E +APE E P + E+ P+T MT + ET TP VA + + P
Sbjct: 4372 ETTMAPESTEAPETTMAPESTEAPETTMAPMTTVASETTKTPDTPVAPETNMVAESTLAP 4431
Query: 538 PVSCWTPATVSP--TPCPST 591
+ TV+P T P T
Sbjct: 4432 ETTMTPEITVAPKTTMAPET 4451
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,481,476
Number of Sequences: 59808
Number of extensions: 508443
Number of successful extensions: 1941
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 1647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1937
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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