Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20318
(598 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 182 1e-46
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 182 2e-46
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 182 2e-46
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 180 5e-46
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 180 7e-46
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 180 7e-46
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 180 7e-46
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 180 9e-46
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 180 9e-46
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 163 6e-41
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 155 2e-38
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 151 3e-37
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 101 4e-22
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 92 2e-19
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 80 1e-15
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 64 5e-11
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 56 2e-08
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 55 4e-08
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 47 8e-06
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.083
At1g16690.2 68414.m01999 transcription factor-related similar to... 30 1.3
At1g16690.1 68414.m01998 transcription factor-related similar to... 30 1.3
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 29 3.1
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 29 3.1
At1g28630.1 68414.m03526 expressed protein ; expression supporte... 28 4.1
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 5.4
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 7.2
At1g55420.1 68414.m06339 DC1 domain-containing protein contains ... 27 7.2
At2g41830.1 68415.m05169 cyclin-related contains Pfam profile PF... 27 9.5
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 27 9.5
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 182 bits (444), Expect = 1e-46
Identities = 82/84 (97%), Positives = 83/84 (98%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKT 435
GDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK
Sbjct: 57 GDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 116
Query: 436 NREKMTQIMFETFNTPAMYVAIQA 507
NREKMTQIMFETFNTPAMYVAIQA
Sbjct: 117 NREKMTQIMFETFNTPAMYVAIQA 140
Score = 95.1 bits (226), Expect = 3e-20
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+Y
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAY 55
Score = 63.7 bits (148), Expect = 9e-11
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVSHTVPIYEG 596
LSLYASGRTTGIVLDSGDGVSHTVPIYEG
Sbjct: 142 LSLYASGRTTGIVLDSGDGVSHTVPIYEG 170
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 182 bits (443), Expect = 2e-46
Identities = 82/84 (97%), Positives = 82/84 (97%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKT 435
GDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK
Sbjct: 57 GDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 116
Query: 436 NREKMTQIMFETFNTPAMYVAIQA 507
NREKMTQIMFETFNTPAMYVAIQA
Sbjct: 117 NREKMTQIMFETFNTPAMYVAIQA 140
Score = 95.1 bits (226), Expect = 3e-20
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+Y
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAY 55
Score = 63.7 bits (148), Expect = 9e-11
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVSHTVPIYEG 596
LSLYASGRTTGIVLDSGDGVSHTVPIYEG
Sbjct: 142 LSLYASGRTTGIVLDSGDGVSHTVPIYEG 170
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 182 bits (443), Expect = 2e-46
Identities = 82/84 (97%), Positives = 82/84 (97%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKT 435
GDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK
Sbjct: 57 GDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 116
Query: 436 NREKMTQIMFETFNTPAMYVAIQA 507
NREKMTQIMFETFNTPAMYVAIQA
Sbjct: 117 NREKMTQIMFETFNTPAMYVAIQA 140
Score = 95.1 bits (226), Expect = 3e-20
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+Y
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAY 55
Score = 63.7 bits (148), Expect = 9e-11
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVSHTVPIYEG 596
LSLYASGRTTGIVLDSGDGVSHTVPIYEG
Sbjct: 142 LSLYASGRTTGIVLDSGDGVSHTVPIYEG 170
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 180 bits (439), Expect = 5e-46
Identities = 81/84 (96%), Positives = 82/84 (97%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKT 435
GDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK
Sbjct: 57 GDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 116
Query: 436 NREKMTQIMFETFNTPAMYVAIQA 507
NREKMTQIMFETFN PAMYVAIQA
Sbjct: 117 NREKMTQIMFETFNVPAMYVAIQA 140
Score = 95.1 bits (226), Expect = 3e-20
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+Y
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAY 55
Score = 63.7 bits (148), Expect = 9e-11
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVSHTVPIYEG 596
LSLYASGRTTGIVLDSGDGVSHTVPIYEG
Sbjct: 142 LSLYASGRTTGIVLDSGDGVSHTVPIYEG 170
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 180 bits (438), Expect = 7e-46
Identities = 79/84 (94%), Positives = 83/84 (98%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKT 435
GDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK
Sbjct: 57 GDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKA 116
Query: 436 NREKMTQIMFETFNTPAMYVAIQA 507
NREKMTQIMFETFN+PAMYVAIQA
Sbjct: 117 NREKMTQIMFETFNSPAMYVAIQA 140
Score = 90.6 bits (215), Expect = 7e-19
Identities = 38/51 (74%), Positives = 45/51 (88%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+Y
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAY 55
Score = 63.7 bits (148), Expect = 9e-11
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVSHTVPIYEG 596
LSLYASGRTTGIVLDSGDGVSHTVPIYEG
Sbjct: 142 LSLYASGRTTGIVLDSGDGVSHTVPIYEG 170
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 180 bits (438), Expect = 7e-46
Identities = 79/84 (94%), Positives = 83/84 (98%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKT 435
GDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK
Sbjct: 57 GDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKA 116
Query: 436 NREKMTQIMFETFNTPAMYVAIQA 507
NREKMTQIMFETFN+PAMYVAIQA
Sbjct: 117 NREKMTQIMFETFNSPAMYVAIQA 140
Score = 90.6 bits (215), Expect = 7e-19
Identities = 38/51 (74%), Positives = 45/51 (88%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+Y
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAY 55
Score = 63.7 bits (148), Expect = 9e-11
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVSHTVPIYEG 596
LSLYASGRTTGIVLDSGDGVSHTVPIYEG
Sbjct: 142 LSLYASGRTTGIVLDSGDGVSHTVPIYEG 170
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 180 bits (438), Expect = 7e-46
Identities = 79/84 (94%), Positives = 83/84 (98%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKT 435
GDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK
Sbjct: 57 GDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKA 116
Query: 436 NREKMTQIMFETFNTPAMYVAIQA 507
NREKMTQIMFETFN+PAMYVAIQA
Sbjct: 117 NREKMTQIMFETFNSPAMYVAIQA 140
Score = 90.6 bits (215), Expect = 7e-19
Identities = 38/51 (74%), Positives = 45/51 (88%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+Y
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAY 55
Score = 63.7 bits (148), Expect = 9e-11
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVSHTVPIYEG 596
LSLYASGRTTGIVLDSGDGVSHTVPIYEG
Sbjct: 142 LSLYASGRTTGIVLDSGDGVSHTVPIYEG 170
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 180 bits (437), Expect = 9e-46
Identities = 80/84 (95%), Positives = 81/84 (96%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKT 435
GDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPK
Sbjct: 57 GDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKA 116
Query: 436 NREKMTQIMFETFNTPAMYVAIQA 507
NREKMTQIMFETFN PAMYVAIQA
Sbjct: 117 NREKMTQIMFETFNAPAMYVAIQA 140
Score = 95.1 bits (226), Expect = 3e-20
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+Y
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAY 55
Score = 63.7 bits (148), Expect = 9e-11
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVSHTVPIYEG 596
LSLYASGRTTGIVLDSGDGVSHTVPIYEG
Sbjct: 142 LSLYASGRTTGIVLDSGDGVSHTVPIYEG 170
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 180 bits (437), Expect = 9e-46
Identities = 80/84 (95%), Positives = 81/84 (96%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKT 435
GDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPK
Sbjct: 57 GDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKA 116
Query: 436 NREKMTQIMFETFNTPAMYVAIQA 507
NREKMTQIMFETFN PAMYVAIQA
Sbjct: 117 NREKMTQIMFETFNAPAMYVAIQA 140
Score = 95.1 bits (226), Expect = 3e-20
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+Y
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAY 55
Score = 63.7 bits (148), Expect = 9e-11
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVSHTVPIYEG 596
LSLYASGRTTGIVLDSGDGVSHTVPIYEG
Sbjct: 142 LSLYASGRTTGIVLDSGDGVSHTVPIYEG 170
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 163 bits (397), Expect = 6e-41
Identities = 69/84 (82%), Positives = 79/84 (94%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKT 435
GDEAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK
Sbjct: 58 GDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKV 117
Query: 436 NREKMTQIMFETFNTPAMYVAIQA 507
NREKMTQIMFE+F P+MY+ IQA
Sbjct: 118 NREKMTQIMFESFAFPSMYIGIQA 141
Score = 89.4 bits (212), Expect = 2e-18
Identities = 38/51 (74%), Positives = 46/51 (90%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTF 56
Score = 62.5 bits (145), Expect = 2e-10
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVSHTVPIYEG 596
LSLY+SGRTTGIVLDSGDGVSHTVPIYEG
Sbjct: 143 LSLYSSGRTTGIVLDSGDGVSHTVPIYEG 171
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 155 bits (376), Expect = 2e-38
Identities = 65/84 (77%), Positives = 78/84 (92%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKT 435
GD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPK
Sbjct: 12 GDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKA 71
Query: 436 NREKMTQIMFETFNTPAMYVAIQA 507
+REKMTQIMFETF P+MY+ +QA
Sbjct: 72 DREKMTQIMFETFAVPSMYIGMQA 95
Score = 54.8 bits (126), Expect = 4e-08
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVSHTVPIYEG 596
LSL+ASGRTTG VLDSGDGVS+ VPIYEG
Sbjct: 97 LSLHASGRTTGTVLDSGDGVSYIVPIYEG 125
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 151 bits (367), Expect = 3e-37
Identities = 69/96 (71%), Positives = 79/96 (82%)
Frame = +1
Query: 220 RDGRYGTEGLL*GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 399
RDG E + G+E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYV-GEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 400 VLLTEAPLNPKTNREKMTQIMFETFNTPAMYVAIQA 507
VLLTEAP NPK NREKMTQIMFE+F+ PAMYV++Q+
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQS 129
Score = 52.4 bits (120), Expect = 2e-07
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +2
Query: 116 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 211
+V D G GM +AGFAGD+AP+ VFP +VGRPR
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPR 35
Score = 52.4 bits (120), Expect = 2e-07
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = +3
Query: 504 SRLSLYASGRTTGIVLDSGDGVSHTVPIYEG 596
S L LY+SGRTTG+VLD G+ VSHTVP+YEG
Sbjct: 129 SVLYLYSSGRTTGVVLDLGERVSHTVPVYEG 159
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 101 bits (242), Expect = 4e-22
Identities = 41/84 (48%), Positives = 56/84 (66%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKT 435
G+ R L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP
Sbjct: 56 GETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSK 115
Query: 436 NREKMTQIMFETFNTPAMYVAIQA 507
NREKM + MFE +N +++ IQA
Sbjct: 116 NREKMIETMFEKYNFAGVFIQIQA 139
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 7/59 (11%)
Frame = +2
Query: 116 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKD-----SYEEMRHR 271
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD + E+RH+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQ 65
Score = 46.0 bits (104), Expect = 2e-05
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVSHTVPIYEG 596
L+LYA G TG+V+DSGDGV+H VP+ +G
Sbjct: 141 LTLYAQGLLTGLVIDSGDGVTHVVPVVDG 169
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 92.3 bits (219), Expect = 2e-19
Identities = 44/87 (50%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Frame = +1
Query: 256 GDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 426
GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL
Sbjct: 71 GDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLT 130
Query: 427 PKTNREKMTQIMFETFNTPAMYVAIQA 507
P +RE +I+FETFN P +Y+A+ +
Sbjct: 131 PPESREYTGEILFETFNVPGLYIAVNS 157
Score = 35.9 bits (79), Expect = 0.021
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 113 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 199
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
Score = 33.5 bits (73), Expect = 0.11
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +3
Query: 537 TGIVLDSGDGVSHTVPIYEG 596
TG+V+D GDG +H VP+ EG
Sbjct: 173 TGVVVDVGDGATHVVPVAEG 192
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 80.2 bits (189), Expect = 1e-15
Identities = 35/82 (42%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 GDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 432
G +A S +R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN +
Sbjct: 78 GSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQ 137
Query: 433 TNREKMTQIMFETFNTPAMYVA 498
REK ++MFE + PA+++A
Sbjct: 138 QQREKAAELMFEKYKVPALFMA 159
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 202
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 29.9 bits (64), Expect = 1.3
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVSHTVPIYEG 596
L+ +A+GR T +V+D G G + P+++G
Sbjct: 164 LTSFATGRATSLVVDCGGGSTTISPVHDG 192
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 64.5 bits (150), Expect = 5e-11
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +1
Query: 223 DGRYGTEGLL*GDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 399
D G L G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP
Sbjct: 61 DKEKGKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHP 120
Query: 400 VLLTEAPLNPKTNREK 447
+LL E PLN + REK
Sbjct: 121 MLLAEPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 8e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 202
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 55.6 bits (128), Expect = 2e-08
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +1
Query: 301 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKTNREKMTQIMFETFN 477
PIE G++ +WD ME + + Y L E +L T+ PK RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 478 TPAMYVAIQA 507
Y + QA
Sbjct: 117 VSGFYASEQA 126
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 113 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 205
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 54.8 bits (126), Expect = 4e-08
Identities = 24/69 (34%), Positives = 41/69 (59%)
Frame = +1
Query: 292 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKTNREKMTQIMFET 471
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 472 FNTPAMYVA 498
F ++Y+A
Sbjct: 121 FGFSSLYIA 129
Score = 32.7 bits (71), Expect = 0.19
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 116 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 208
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 47.2 bits (107), Expect = 8e-06
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +1
Query: 301 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKTNREKMTQIMFETFN 477
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 478 TPAMYVAIQA 507
PA+ + A
Sbjct: 145 VPAVAFGVDA 154
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +2
Query: 116 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 217
+V+DNG+ + G+AG+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.083
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -2
Query: 237 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 100
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.9 bits (64), Expect = 1.3
Identities = 22/67 (32%), Positives = 29/67 (43%)
Frame = +1
Query: 247 LL*GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 426
LL D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 165 LLQPDAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYN 220
Query: 427 PKTNREK 447
REK
Sbjct: 221 VFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.9 bits (64), Expect = 1.3
Identities = 22/67 (32%), Positives = 29/67 (43%)
Frame = +1
Query: 247 LL*GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 426
LL D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 165 LLQPDAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYN 220
Query: 427 PKTNREK 447
REK
Sbjct: 221 VFRPREK 227
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVSHTVPIYEG 596
L+LYA+ RT+GIV++ G V +PI G
Sbjct: 242 LALYAARRTSGIVVNIGFQVITILPILHG 270
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVSHTVPIYEG 596
L+LYA+ RT+GIV++ G V +PI G
Sbjct: 242 LALYAARRTSGIVVNIGFQVITILPILHG 270
>At1g28630.1 68414.m03526 expressed protein ; expression supported
by MPSS
Length = 321
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 565 PSPESSTIPVVRPDAYSESRL 503
P PESSTIP + PD + +L
Sbjct: 64 PCPESSTIPQISPDMQQQQQL 84
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -3
Query: 347 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 258
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -2
Query: 213 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 91
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At1g55420.1 68414.m06339 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 725
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = -3
Query: 398 GCSSGATRSSL*K-V*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSPHKSPSVPY 231
GC S + S + + C+ F + + T+PC Y R PL LC + S Y
Sbjct: 529 GCGSDSCSSYFLECIKCKSF-LGIKCATLPCEAHYTHDRHPLTLCYEEEEDTTSGQY 584
>At2g41830.1 68415.m05169 cyclin-related contains Pfam profile
PF02984: Cyclin, C-terminal domain
Length = 1025
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = -1
Query: 262 HLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHTGAIV 125
H L+ +L+ H DH +++ PS S +S + H+ IV
Sbjct: 342 HFLLSMLIKHLDHKSVLKHPSMQLNILEVTSSLSETAKVEHSATIV 387
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 325 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKTNREKMTQIMFETF 474
NW +E + + + + P LL EA + PK+ E Q M++T+
Sbjct: 480 NWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTY 529
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,518,115
Number of Sequences: 28952
Number of extensions: 327745
Number of successful extensions: 1118
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1116
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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