Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20314
         (746 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    25   0.49 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.1  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    23   2.6  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    23   2.6  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    23   2.6  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   3.4  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -1

Query: 374 LIFINIAWSCFIIIIVLILNYYCLI 300
           L F+ I +  FII ++++L  YC+I
Sbjct: 236 LYFLTIIFLFFIIPLIILLILYCII 260


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = -1

Query: 395 TVNVLFLLIFINIAWSCFIIIIVLILNYYCLIII 294
           T+++LFL   I   +S FII  + +L +YC++II
Sbjct: 203 TLHLLFLPC-IYYFYSAFIIFTIHLL-FYCVLII 234


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/41 (24%), Positives = 24/41 (58%)
 Frame = +2

Query: 32  LIVCGVFLKQLNSKITRFNVFISTSHLFV*FYREVSPVIWF 154
           LI+  VFL  L++ +  F ++ +T++L +     ++  +W+
Sbjct: 137 LILAVVFLLTLSALLEGFTLYHTTAYLHIITMINMNCALWY 177


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/41 (24%), Positives = 24/41 (58%)
 Frame = +2

Query: 32  LIVCGVFLKQLNSKITRFNVFISTSHLFV*FYREVSPVIWF 154
           LI+  VFL  L++ +  F ++ +T++L +     ++  +W+
Sbjct: 137 LILAVVFLLTLSALLEGFTLYHTTAYLHIITMINMNCALWY 177


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/41 (24%), Positives = 24/41 (58%)
 Frame = +2

Query: 32  LIVCGVFLKQLNSKITRFNVFISTSHLFV*FYREVSPVIWF 154
           LI+  VFL  L++ +  F ++ +T++L +     ++  +W+
Sbjct: 137 LILAVVFLLTLSALLEGFTLYHTTAYLHIITMINMNCALWY 177


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +3

Query: 378 KQNINCPLHTHKLDRVREMGRLF 446
           K   N P H H  D +   G++F
Sbjct: 372 KTRTNLPTHRHPQDEIPYCGKIF 394


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,028
Number of Sequences: 336
Number of extensions: 3046
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)