Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20314
         (746 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant r...    24   5.7  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      23   7.6  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   7.6  

>AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant
           receptor Or5 protein.
          Length = 391

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +2

Query: 44  GVFLKQLNSKITRFNVFISTSHLFV*FYREVSP 142
           G +L ++N +I RF+     SHL +  +  V+P
Sbjct: 112 GDYLVRINHRIDRFSKIYCCSHLCLAIFYWVAP 144


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 232 CFSVMIFFSNFFKL 191
           CF+V+ F S+FF L
Sbjct: 52  CFNVLTFISSFFSL 65


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -1

Query: 389 NVLFLLIFINIAWSCFIIIIVLILNYYCL 303
           NV+F     + A  CF+++   I  YY +
Sbjct: 555 NVIFYFGTASFAIPCFVVLTFFIYYYYAV 583


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,106
Number of Sequences: 2352
Number of extensions: 11055
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)