BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20314
(746 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC027734-1|AAH27734.2| 176|Homo sapiens vitamin K epoxide reduc... 30 7.7
AY423045-1|AAR82915.1| 176|Homo sapiens VKORC1-like protein 1 p... 30 7.7
>BC027734-1|AAH27734.2| 176|Homo sapiens vitamin K epoxide
reductase complex, subunit 1-like 1 protein.
Length = 176
Score = 30.3 bits (65), Expect = 7.7
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = -1
Query: 413 LMSVKGTVNVLFLLIFINIAWSCFIIIIVLILNYYCLII 297
+MSV G++ + ++L F+ + C I I+ +LN+ LII
Sbjct: 118 IMSVVGSLYLAYILYFV-LKEFCIICIVTYVLNFLLLII 155
>AY423045-1|AAR82915.1| 176|Homo sapiens VKORC1-like protein 1
protein.
Length = 176
Score = 30.3 bits (65), Expect = 7.7
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = -1
Query: 413 LMSVKGTVNVLFLLIFINIAWSCFIIIIVLILNYYCLII 297
+MSV G++ + ++L F+ + C I I+ +LN+ LII
Sbjct: 118 IMSVVGSLYLAYILYFV-LKEFCIICIVTYVLNFLLLII 155
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,906,164
Number of Sequences: 237096
Number of extensions: 1632541
Number of successful extensions: 2444
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2444
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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