Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20314
         (746 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119202-1|AAM51062.1|  500|Drosophila melanogaster SD13634p pro...    32   0.95 
AF398410-1|AAK97480.1|  500|Drosophila melanogaster skinny hedge...    32   0.95 
AF393157-1|AAK73748.1|  500|Drosophila melanogaster sightless pr...    32   0.95 
AE014296-575|AAF47725.1|  500|Drosophila melanogaster CG11495-PA...    32   0.95 
BT014634-1|AAT27258.1|  932|Drosophila melanogaster RH66772p pro...    30   3.9  
AF231040-1|AAF34809.1|  932|Drosophila melanogaster SP1029 prote...    30   3.9  
AE014297-4366|AAN14169.1|  932|Drosophila melanogaster CG11956-P...    30   3.9  
AE014297-4365|AAG22174.1|  932|Drosophila melanogaster CG11956-P...    30   3.9  
AE014297-4364|AAF56884.1|  932|Drosophila melanogaster CG11956-P...    30   3.9  

>AY119202-1|AAM51062.1|  500|Drosophila melanogaster SD13634p
           protein.
          Length = 500

 Score = 31.9 bits (69), Expect = 0.95
 Identities = 10/36 (27%), Positives = 23/36 (63%)
 Frame = -1

Query: 398 GTVNVLFLLIFINIAWSCFIIIIVLILNYYCLIIIA 291
           G + V  L + +N+ WS  ++++ LI +YY + +++
Sbjct: 104 GFIGVCALALSVNLDWSSMVLLVTLIASYYIVSLLS 139


>AF398410-1|AAK97480.1|  500|Drosophila melanogaster skinny hedgehog
           protein.
          Length = 500

 Score = 31.9 bits (69), Expect = 0.95
 Identities = 10/36 (27%), Positives = 23/36 (63%)
 Frame = -1

Query: 398 GTVNVLFLLIFINIAWSCFIIIIVLILNYYCLIIIA 291
           G + V  L + +N+ WS  ++++ LI +YY + +++
Sbjct: 104 GFIGVCALALSVNLDWSSMVLLVTLIASYYIVSLLS 139


>AF393157-1|AAK73748.1|  500|Drosophila melanogaster sightless
           protein.
          Length = 500

 Score = 31.9 bits (69), Expect = 0.95
 Identities = 10/36 (27%), Positives = 23/36 (63%)
 Frame = -1

Query: 398 GTVNVLFLLIFINIAWSCFIIIIVLILNYYCLIIIA 291
           G + V  L + +N+ WS  ++++ LI +YY + +++
Sbjct: 104 GFIGVCALALSVNLDWSSMVLLVTLIASYYIVSLLS 139


>AE014296-575|AAF47725.1|  500|Drosophila melanogaster CG11495-PA
           protein.
          Length = 500

 Score = 31.9 bits (69), Expect = 0.95
 Identities = 10/36 (27%), Positives = 23/36 (63%)
 Frame = -1

Query: 398 GTVNVLFLLIFINIAWSCFIIIIVLILNYYCLIIIA 291
           G + V  L + +N+ WS  ++++ LI +YY + +++
Sbjct: 104 GFIGVCALALSVNLDWSSMVLLVTLIASYYIVSLLS 139


>BT014634-1|AAT27258.1|  932|Drosophila melanogaster RH66772p
           protein.
          Length = 932

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 15/52 (28%), Positives = 29/52 (55%)
 Frame = -2

Query: 640 LSYCIVFIAGLERGLRAES*NSVTKKTLHSSLRLPCSPRSTHSHLRLCSVYE 485
           + + ++F+A L  GL     ++ + +T ++  RLP S R    HLR+ ++ E
Sbjct: 1   MKWFLLFVAALGLGLATADSSADSIETTYNYYRLPTSLRPQKYHLRILTLLE 52


>AF231040-1|AAF34809.1|  932|Drosophila melanogaster SP1029 protein
           protein.
          Length = 932

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 15/52 (28%), Positives = 29/52 (55%)
 Frame = -2

Query: 640 LSYCIVFIAGLERGLRAES*NSVTKKTLHSSLRLPCSPRSTHSHLRLCSVYE 485
           + + ++F+A L  GL     ++ + +T ++  RLP S R    HLR+ ++ E
Sbjct: 1   MKWFLLFVAALGLGLATADSSADSIETTYNYYRLPTSLRPQKYHLRILTLLE 52


>AE014297-4366|AAN14169.1|  932|Drosophila melanogaster CG11956-PC,
           isoform C protein.
          Length = 932

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 15/52 (28%), Positives = 29/52 (55%)
 Frame = -2

Query: 640 LSYCIVFIAGLERGLRAES*NSVTKKTLHSSLRLPCSPRSTHSHLRLCSVYE 485
           + + ++F+A L  GL     ++ + +T ++  RLP S R    HLR+ ++ E
Sbjct: 1   MKWFLLFVAALGLGLATADSSADSIETTYNYYRLPTSLRPQKYHLRILTLLE 52


>AE014297-4365|AAG22174.1|  932|Drosophila melanogaster CG11956-PB,
           isoform B protein.
          Length = 932

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 15/52 (28%), Positives = 29/52 (55%)
 Frame = -2

Query: 640 LSYCIVFIAGLERGLRAES*NSVTKKTLHSSLRLPCSPRSTHSHLRLCSVYE 485
           + + ++F+A L  GL     ++ + +T ++  RLP S R    HLR+ ++ E
Sbjct: 1   MKWFLLFVAALGLGLATADSSADSIETTYNYYRLPTSLRPQKYHLRILTLLE 52


>AE014297-4364|AAF56884.1|  932|Drosophila melanogaster CG11956-PA,
           isoform A protein.
          Length = 932

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 15/52 (28%), Positives = 29/52 (55%)
 Frame = -2

Query: 640 LSYCIVFIAGLERGLRAES*NSVTKKTLHSSLRLPCSPRSTHSHLRLCSVYE 485
           + + ++F+A L  GL     ++ + +T ++  RLP S R    HLR+ ++ E
Sbjct: 1   MKWFLLFVAALGLGLATADSSADSIETTYNYYRLPTSLRPQKYHLRILTLLE 52


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,099,234
Number of Sequences: 53049
Number of extensions: 501589
Number of successful extensions: 837
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)