Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20311
(757 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_346| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_57062| Best HMM Match : Pox_A32 (HMM E-Value=0.006) 29 5.4
SB_50851| Best HMM Match : DUF1103 (HMM E-Value=2.4) 29 5.4
SB_47775| Best HMM Match : Supt5 (HMM E-Value=9.7) 29 5.4
SB_46876| Best HMM Match : DUF1103 (HMM E-Value=2.4) 29 5.4
SB_43364| Best HMM Match : Pox_A32 (HMM E-Value=0.0078) 29 5.4
SB_40151| Best HMM Match : DUF1103 (HMM E-Value=2.4) 29 5.4
SB_39136| Best HMM Match : DUF1103 (HMM E-Value=2.4) 29 5.4
SB_38626| Best HMM Match : Supt5 (HMM E-Value=9.7) 29 5.4
SB_37988| Best HMM Match : Rho_N (HMM E-Value=0.0007) 29 5.4
SB_34401| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 29 5.4
SB_30160| Best HMM Match : Supt5 (HMM E-Value=7.5) 29 5.4
SB_24231| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_15820| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_4772| Best HMM Match : Peptidase_U61 (HMM E-Value=3.1) 29 5.4
SB_2228| Best HMM Match : Pox_A32 (HMM E-Value=0.099) 29 5.4
SB_57540| Best HMM Match : Supt5 (HMM E-Value=9.7) 29 5.4
SB_36600| Best HMM Match : DUF1103 (HMM E-Value=2.4) 29 5.4
SB_31661| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_19114| Best HMM Match : E-MAP-115 (HMM E-Value=0.44) 29 5.4
SB_10414| Best HMM Match : Rho_N (HMM E-Value=0.0015) 29 5.4
SB_8920| Best HMM Match : DUF1103 (HMM E-Value=2.4) 29 5.4
SB_3818| Best HMM Match : Pox_A32 (HMM E-Value=0.022) 29 5.4
SB_49487| Best HMM Match : Zip (HMM E-Value=0.014) 28 7.1
SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_56545| Best HMM Match : Exonuc_X-T (HMM E-Value=1.2e-09) 28 7.1
SB_35532| Best HMM Match : Peptidase_S49 (HMM E-Value=2.7) 28 7.1
SB_39673| Best HMM Match : TRAP-delta (HMM E-Value=1.2e-32) 28 9.4
SB_1285| Best HMM Match : SET (HMM E-Value=0.011) 28 9.4
SB_58880| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_1834| Best HMM Match : efhand (HMM E-Value=1e-06) 28 9.4
>SB_346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 652
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +1
Query: 307 PGPPQHQEHETQNPEHHEDAEKIVSSVKN---DINTAEIALRQGFQEVSDGIGKWYARTE 477
P PP H + E H E E+I S K+ D+ A+ L++ +++ + +G Y R
Sbjct: 282 PNPPPHLDEEKIKQLHEELKEEIKSMAKDSEKDLEDAKKDLKEEIEQIKEEVG--YLRYM 339
Query: 478 QINEL 492
+ +L
Sbjct: 340 EAKQL 344
>SB_57062| Best HMM Match : Pox_A32 (HMM E-Value=0.006)
Length = 485
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -2
Query: 264 IRHSTFSKSLFNDGLISSTITLTGMSMTSFL 172
I H TF+ S NDG+I+ I L SMT L
Sbjct: 114 ILHKTFTISKPNDGVINEHINLPRRSMTGIL 144
>SB_50851| Best HMM Match : DUF1103 (HMM E-Value=2.4)
Length = 405
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -2
Query: 264 IRHSTFSKSLFNDGLISSTITLTGMSMTSFL 172
I H TF+ S NDG+I+ I L SMT L
Sbjct: 246 ILHKTFTISKPNDGVINEHINLPRRSMTGIL 276
>SB_47775| Best HMM Match : Supt5 (HMM E-Value=9.7)
Length = 280
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -2
Query: 264 IRHSTFSKSLFNDGLISSTITLTGMSMTSFL 172
I H TF+ S NDG+I+ I L SMT L
Sbjct: 114 ILHKTFTISKPNDGVINEHINLPRRSMTGIL 144
>SB_46876| Best HMM Match : DUF1103 (HMM E-Value=2.4)
Length = 364
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -2
Query: 264 IRHSTFSKSLFNDGLISSTITLTGMSMTSFL 172
I H TF+ S NDG+I+ I L SMT L
Sbjct: 246 ILHKTFTISKPNDGVINEHINLPRRSMTGIL 276
>SB_43364| Best HMM Match : Pox_A32 (HMM E-Value=0.0078)
Length = 759
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -2
Query: 264 IRHSTFSKSLFNDGLISSTITLTGMSMTSFL 172
I H TF+ S NDG+I+ I L SMT L
Sbjct: 198 ILHKTFTISKPNDGVINEHINLPRRSMTGIL 228
>SB_40151| Best HMM Match : DUF1103 (HMM E-Value=2.4)
Length = 348
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -2
Query: 264 IRHSTFSKSLFNDGLISSTITLTGMSMTSFL 172
I H TF+ S NDG+I+ I L SMT L
Sbjct: 246 ILHKTFTISKPNDGVINEHINLPRRSMTGIL 276
>SB_39136| Best HMM Match : DUF1103 (HMM E-Value=2.4)
Length = 290
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -2
Query: 264 IRHSTFSKSLFNDGLISSTITLTGMSMTSFL 172
I H TF+ S NDG+I+ I L SMT L
Sbjct: 188 ILHKTFTISKPNDGVINEHINLPRRSMTGIL 218
>SB_38626| Best HMM Match : Supt5 (HMM E-Value=9.7)
Length = 280
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -2
Query: 264 IRHSTFSKSLFNDGLISSTITLTGMSMTSFL 172
I H TF+ S NDG+I+ I L SMT L
Sbjct: 114 ILHKTFTISKPNDGVINEHINLPRRSMTGIL 144
>SB_37988| Best HMM Match : Rho_N (HMM E-Value=0.0007)
Length = 1018
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -2
Query: 264 IRHSTFSKSLFNDGLISSTITLTGMSMTSFL 172
I H TF+ S NDG+I+ I L SMT L
Sbjct: 687 ILHKTFTISKPNDGVINEHINLPRRSMTGIL 717
>SB_34401| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 2629
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -2
Query: 264 IRHSTFSKSLFNDGLISSTITLTGMSMTSFL 172
I H TF+ S NDG+I+ I L SMT L
Sbjct: 1951 ILHKTFTISKPNDGVINEHINLPRRSMTGIL 1981
>SB_30160| Best HMM Match : Supt5 (HMM E-Value=7.5)
Length = 280
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -2
Query: 264 IRHSTFSKSLFNDGLISSTITLTGMSMTSFL 172
I H TF+ S NDG+I+ I L SMT L
Sbjct: 114 ILHKTFTISKPNDGVINEHINLPRRSMTGIL 144
>SB_24231| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 239 DLENVECRMKMRKSRGL*SI*EIPGPRSIKSTKH 340
D NV R RK++ L PGPR++ S KH
Sbjct: 46 DEGNVTLRKSKRKAKDLPDAINSPGPRTVDSPKH 79
>SB_15820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1998
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -2
Query: 264 IRHSTFSKSLFNDGLISSTITLTGMSMTSFL 172
I H TF+ S NDG+I+ I L SMT L
Sbjct: 1583 ILHKTFTISKPNDGVINEHINLPRRSMTGIL 1613
>SB_4772| Best HMM Match : Peptidase_U61 (HMM E-Value=3.1)
Length = 363
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Frame = +1
Query: 370 KIVSSVKNDINTAEIALRQGFQEVSDGIGKW----YARTEQINELQASLQLSKKIS 525
K S N+ + ++ GF +V G G W Y E +N Q +L KK S
Sbjct: 43 KFTGSCTNESDVGQMRFDNGFLQVCTGTGGWRSMQYQGCEPLNVAQRNLDAFKKSS 98
>SB_2228| Best HMM Match : Pox_A32 (HMM E-Value=0.099)
Length = 771
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -2
Query: 264 IRHSTFSKSLFNDGLISSTITLTGMSMTSFL 172
I H TF+ S NDG+I+ I L SMT L
Sbjct: 347 ILHKTFTISKPNDGVINEHINLPRRSMTGIL 377
>SB_57540| Best HMM Match : Supt5 (HMM E-Value=9.7)
Length = 280
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -2
Query: 264 IRHSTFSKSLFNDGLISSTITLTGMSMTSFL 172
I H TF+ S NDG+I+ I L SMT L
Sbjct: 114 ILHKTFTISKPNDGVINEHINLPRRSMTGIL 144
>SB_36600| Best HMM Match : DUF1103 (HMM E-Value=2.4)
Length = 412
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -2
Query: 264 IRHSTFSKSLFNDGLISSTITLTGMSMTSFL 172
I H TF+ S NDG+I+ I L SMT L
Sbjct: 246 ILHKTFTISKPNDGVINEHINLPRRSMTGIL 276
>SB_31661| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 864
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -2
Query: 264 IRHSTFSKSLFNDGLISSTITLTGMSMTSFL 172
I H TF+ S NDG+I+ I L SMT L
Sbjct: 297 ILHKTFTISKPNDGVINEHINLPRRSMTGIL 327
>SB_19114| Best HMM Match : E-MAP-115 (HMM E-Value=0.44)
Length = 532
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -2
Query: 264 IRHSTFSKSLFNDGLISSTITLTGMSMTSFL 172
I H TF+ S NDG+I+ I L SMT L
Sbjct: 114 ILHKTFTISKPNDGVINEHINLPRRSMTGIL 144
>SB_10414| Best HMM Match : Rho_N (HMM E-Value=0.0015)
Length = 916
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -2
Query: 264 IRHSTFSKSLFNDGLISSTITLTGMSMTSFL 172
I H TF+ S NDG+I+ I L SMT L
Sbjct: 545 ILHKTFTISKPNDGVINEHINLPRRSMTGIL 575
>SB_8920| Best HMM Match : DUF1103 (HMM E-Value=2.4)
Length = 399
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -2
Query: 264 IRHSTFSKSLFNDGLISSTITLTGMSMTSFL 172
I H TF+ S NDG+I+ I L SMT L
Sbjct: 233 ILHKTFTISKPNDGVINEHINLPRRSMTGIL 263
>SB_3818| Best HMM Match : Pox_A32 (HMM E-Value=0.022)
Length = 766
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -2
Query: 264 IRHSTFSKSLFNDGLISSTITLTGMSMTSFL 172
I H TF+ S NDG+I+ I L SMT L
Sbjct: 246 ILHKTFTISKPNDGVINEHINLPRRSMTGIL 276
>SB_49487| Best HMM Match : Zip (HMM E-Value=0.014)
Length = 510
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +1
Query: 322 HQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGI 453
HQ H + HH D +KI S + + GF +SDG+
Sbjct: 73 HQNHHDHHHHHHHD-KKIDSKTSIATVAWMVIVSDGFHNLSDGL 115
>SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1906
Score = 28.3 bits (60), Expect = 7.1
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Frame = +1
Query: 259 PDENEEIKRPLVDLRNPGPPQHQEHETQN---PEHHEDAEKI--VSSVKNDINTAEIALR 423
PDE E + + DL NP + E E Q+ + +D EKI V S N + I L
Sbjct: 831 PDEREIVLSEIYDLDNPSDDEELETEIQDALETANEQDKEKILAVYSALRSPNLSGIELA 890
Query: 424 Q 426
Q
Sbjct: 891 Q 891
>SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1040
Score = 28.3 bits (60), Expect = 7.1
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = +2
Query: 53 DKVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKPSL 232
+KV E+ D + ++N EL +Q IK+ + L+ +KE+ + K+I E+ L
Sbjct: 603 EKVNESRDDEITELEN-----ELEEQREIIKENEEKLKEKEKEIEKLKKKII--ELSDKL 655
Query: 233 KSDLE 247
K D+E
Sbjct: 656 K-DME 659
>SB_56545| Best HMM Match : Exonuc_X-T (HMM E-Value=1.2e-09)
Length = 416
Score = 28.3 bits (60), Expect = 7.1
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Frame = +2
Query: 134 NTIKDIDNS--LRANKKEVIDIPVKVIVEEIKPSLKSDLENVECRMKMRKSRGL*SI*EI 307
N +K + +S +++ K + D+PV +EE D + K RGL ++ +
Sbjct: 315 NFMKQMKHSQEVKSRKDTLCDLPVSSSMEEKIAKSGMDFNKMRSVYKEGGERGLLTVLAL 374
Query: 308 PGPRS---IKSTKHRILNTTKMLKK 373
P S +K +K R+ T +++ K
Sbjct: 375 PPQYSQLNVKGSKPRVTKTIRIINK 399
>SB_35532| Best HMM Match : Peptidase_S49 (HMM E-Value=2.7)
Length = 149
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 44 SIPDKVPEAEDKPLNVVDNLSSEQELIDQ-ANTIKDIDNSLRANKKEVIDIPVKVIVEEI 220
SIP P+ + K LN V+N++ +E ++ A+ + D+ N + + K E V V+ +
Sbjct: 74 SIPLAKPQKQQKVLNAVENINWPEEKKERFADVLNDVHN-ISSEKSEEEGDGVVFFVKSL 132
Query: 221 K 223
K
Sbjct: 133 K 133
>SB_39673| Best HMM Match : TRAP-delta (HMM E-Value=1.2e-32)
Length = 504
Score = 27.9 bits (59), Expect = 9.4
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +3
Query: 513 QENFGAQIQKLNETLHFIKPADTIAAPSVEETQNKASFETIESGLK--SLETNFNSGLNQ 686
QEN QI LNE L + T A E QN T + +K S+ ++ NS
Sbjct: 134 QENAQKQINHLNELLTTLTDIITSAKEDWEGEQNSVGLLTCGAQVKAPSVNSSSNSPDES 193
Query: 687 LSEGIQIVAT 716
+ E I + T
Sbjct: 194 VIEAINVFVT 203
>SB_1285| Best HMM Match : SET (HMM E-Value=0.011)
Length = 829
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 244 RKR*VPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAE-KIVSSVKNDI 399
+K V + EE+ R LV L GPP + T+ P E ++S VK ++
Sbjct: 554 KKYSVAEFREELVRQLVGLEEFGPPPAHKPPTRAPNQFETVHMPMMSDVKRNL 606
>SB_58880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1098
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/63 (23%), Positives = 31/63 (49%)
Frame = +1
Query: 328 EHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQINELQASLQ 507
+ +TQ + EK + +KN++ AE L + Q + + + ++ E ++SLQ
Sbjct: 310 QKQTQRKSEIKSIEKELPDLKNNLKKAEADLEKAVQGEAKSSQELRSIRSKVEEARSSLQ 369
Query: 508 LSK 516
S+
Sbjct: 370 ASR 372
>SB_1834| Best HMM Match : efhand (HMM E-Value=1e-06)
Length = 659
Score = 27.9 bits (59), Expect = 9.4
Identities = 20/93 (21%), Positives = 39/93 (41%)
Frame = +1
Query: 262 DENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEV 441
D ++ K PLV+ P E+ PE E E+++ + + + I + F++
Sbjct: 530 DVSDLEKMPLVEPTQFNPHVQSENLKLRPEAEEAFERVMHRLADRVRIRRIQIFPLFEDY 589
Query: 442 SDGIGKWYARTEQINELQASLQLSKKISALRYK 540
D + Q N + + L L +SA ++
Sbjct: 590 -DKVHNGSVSRSQFNRVLSELDLGGLVSAREFE 621
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,156,415
Number of Sequences: 59808
Number of extensions: 383035
Number of successful extensions: 1412
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1409
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2058295707
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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