Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20308
(700 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ999006-1|ABJ99082.1| 282|Anopheles gambiae voltage-dependent ... 107 3e-25
AY137768-1|AAN16031.1| 282|Anopheles gambiae porin protein. 107 3e-25
AY082909-1|AAL89811.1| 282|Anopheles gambiae porin protein. 107 3e-25
AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic acetylch... 24 4.0
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 23 7.0
U51225-1|AAA96405.1| 692|Anopheles gambiae hexamerin protein. 23 9.2
EF588455-1|ABQ96691.1| 177|Anopheles gambiae transposase protein. 23 9.2
AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic acetylch... 23 9.2
AF020870-1|AAC31873.1| 692|Anopheles gambiae hexamerin A protein. 23 9.2
>DQ999006-1|ABJ99082.1| 282|Anopheles gambiae voltage-dependent
anion channel protein.
Length = 282
Score = 107 bits (257), Expect = 3e-25
Identities = 45/106 (42%), Positives = 74/106 (69%)
Frame = +1
Query: 220 HLQPGKRKGFWHLSSKFAVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAP 399
H K F L +K+ VK+YGL F+EKWNTDNTL +++++++++ GLKV+ +G F P
Sbjct: 45 HSNQDTGKVFGSLETKYKVKEYGLNFSEKWNTDNTLTSEVSVENQLVKGLKVSFDGMFVP 104
Query: 400 QTGTKTGKLKTSFTNDTVAVNTNLDLDLAGPVVDVAEY*TTRVGWL 537
TG+KTG+ KT++++D V V+ + ++DL+GP+V+ + GWL
Sbjct: 105 HTGSKTGRFKTAYSHDRVRVDADFNVDLSGPLVNASGV-AAYQGWL 149
Score = 91.1 bits (216), Expect = 3e-20
Identities = 37/61 (60%), Positives = 49/61 (80%)
Frame = +3
Query: 510 VLNYQGWLAGVHTQFDTQKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSIYQKVSDKL 689
V YQGWLAG FD+QK+K + NNFALGY +GDF LHTNV++G++FGG IYQ+ +D+L
Sbjct: 142 VAAYQGWLAGYQVAFDSQKSKITANNFALGYSAGDFVLHTNVNDGREFGGLIYQRCNDRL 201
Query: 690 D 692
+
Sbjct: 202 E 202
Score = 89.0 bits (211), Expect = 1e-19
Identities = 38/56 (67%), Positives = 50/56 (89%)
Frame = +2
Query: 89 MAPPYYADLGKKANDVFSKGYHFGVFKLDLKTKSESGVEFTSGITSNQESGKVFGT 256
MAPP Y+DLGK+A DVF+KGYHFG++KLD+KTK+ SGVEF++ SNQ++GKVFG+
Sbjct: 1 MAPPSYSDLGKQARDVFNKGYHFGLWKLDVKTKTNSGVEFSTSGHSNQDTGKVFGS 56
>AY137768-1|AAN16031.1| 282|Anopheles gambiae porin protein.
Length = 282
Score = 107 bits (257), Expect = 3e-25
Identities = 45/106 (42%), Positives = 74/106 (69%)
Frame = +1
Query: 220 HLQPGKRKGFWHLSSKFAVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAP 399
H K F L +K+ VK+YGL F+EKWNTDNTL +++++++++ GLKV+ +G F P
Sbjct: 45 HSNQDTGKVFGSLETKYKVKEYGLNFSEKWNTDNTLTSEVSVENQLVKGLKVSFDGMFVP 104
Query: 400 QTGTKTGKLKTSFTNDTVAVNTNLDLDLAGPVVDVAEY*TTRVGWL 537
TG+KTG+ KT++++D V V+ + ++DL+GP+V+ + GWL
Sbjct: 105 HTGSKTGRFKTAYSHDRVRVDADFNVDLSGPLVNASGV-AAYQGWL 149
Score = 91.1 bits (216), Expect = 3e-20
Identities = 37/61 (60%), Positives = 49/61 (80%)
Frame = +3
Query: 510 VLNYQGWLAGVHTQFDTQKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSIYQKVSDKL 689
V YQGWLAG FD+QK+K + NNFALGY +GDF LHTNV++G++FGG IYQ+ +D+L
Sbjct: 142 VAAYQGWLAGYQVAFDSQKSKITANNFALGYSAGDFVLHTNVNDGREFGGLIYQRCNDRL 201
Query: 690 D 692
+
Sbjct: 202 E 202
Score = 89.0 bits (211), Expect = 1e-19
Identities = 38/56 (67%), Positives = 50/56 (89%)
Frame = +2
Query: 89 MAPPYYADLGKKANDVFSKGYHFGVFKLDLKTKSESGVEFTSGITSNQESGKVFGT 256
MAPP Y+DLGK+A DVF+KGYHFG++KLD+KTK+ SGVEF++ SNQ++GKVFG+
Sbjct: 1 MAPPSYSDLGKQARDVFNKGYHFGLWKLDVKTKTNSGVEFSTSGHSNQDTGKVFGS 56
>AY082909-1|AAL89811.1| 282|Anopheles gambiae porin protein.
Length = 282
Score = 107 bits (257), Expect = 3e-25
Identities = 45/106 (42%), Positives = 74/106 (69%)
Frame = +1
Query: 220 HLQPGKRKGFWHLSSKFAVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAP 399
H K F L +K+ VK+YGL F+EKWNTDNTL +++++++++ GLKV+ +G F P
Sbjct: 45 HSNQDTGKVFGSLETKYKVKEYGLNFSEKWNTDNTLTSEVSVENQLVKGLKVSFDGMFVP 104
Query: 400 QTGTKTGKLKTSFTNDTVAVNTNLDLDLAGPVVDVAEY*TTRVGWL 537
TG+KTG+ KT++++D V V+ + ++DL+GP+V+ + GWL
Sbjct: 105 HTGSKTGRFKTAYSHDRVRVDADFNVDLSGPLVNASGV-AAYQGWL 149
Score = 91.1 bits (216), Expect = 3e-20
Identities = 37/61 (60%), Positives = 49/61 (80%)
Frame = +3
Query: 510 VLNYQGWLAGVHTQFDTQKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSIYQKVSDKL 689
V YQGWLAG FD+QK+K + NNFALGY +GDF LHTNV++G++FGG IYQ+ +D+L
Sbjct: 142 VAAYQGWLAGYQVAFDSQKSKITANNFALGYSAGDFVLHTNVNDGREFGGLIYQRCNDRL 201
Query: 690 D 692
+
Sbjct: 202 E 202
Score = 89.0 bits (211), Expect = 1e-19
Identities = 38/56 (67%), Positives = 50/56 (89%)
Frame = +2
Query: 89 MAPPYYADLGKKANDVFSKGYHFGVFKLDLKTKSESGVEFTSGITSNQESGKVFGT 256
MAPP Y+DLGK+A DVF+KGYHFG++KLD+KTK+ SGVEF++ SNQ++GKVFG+
Sbjct: 1 MAPPSYSDLGKQARDVFNKGYHFGLWKLDVKTKTNSGVEFSTSGHSNQDTGKVFGS 56
>AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 7 protein.
Length = 509
Score = 24.2 bits (50), Expect = 4.0
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 164 FKLDLKTKSESGVEFTSGITSNQ 232
F+LDL+ + ESG + +S IT+ +
Sbjct: 157 FQLDLQLQDESGGDISSFITNGE 179
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 23.4 bits (48), Expect = 7.0
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 87 TWLPHIMLTLERRPMMSSARAITLVFSNST*RPRASLVLNSPAES 221
+WLPH+ ER ++ A + L+ ++S R + +L S +ES
Sbjct: 742 SWLPHVKEVTERAGKIADATS-RLLRNHSEPRASKAKLLASVSES 785
>U51225-1|AAA96405.1| 692|Anopheles gambiae hexamerin protein.
Length = 692
Score = 23.0 bits (47), Expect = 9.2
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +3
Query: 522 QGWLAGVHTQFDTQKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSI 665
+GW +G+ QF ++ + GYQ D V++G F S+
Sbjct: 607 KGWTSGMPMQFYFIITPYTAKTYEQGYQY-DKTFTCGVESGMRFYDSL 653
>EF588455-1|ABQ96691.1| 177|Anopheles gambiae transposase protein.
Length = 177
Score = 23.0 bits (47), Expect = 9.2
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3
Query: 593 SKVVLGELCFLCIKLGVYTSQPT 525
S V G CF C+K+ YT T
Sbjct: 17 SPVETGAKCFYCLKVFKYTKGTT 39
>AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 5 protein.
Length = 533
Score = 23.0 bits (47), Expect = 9.2
Identities = 7/31 (22%), Positives = 16/31 (51%)
Frame = -2
Query: 612 HQIGNLEQSCSWRTLLFVYQTGCVHQPANPG 520
H+ + + W ++F+Y C+ + + PG
Sbjct: 335 HRNADTHEMSDWVRVIFLYWLPCILRMSRPG 365
>AF020870-1|AAC31873.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 23.0 bits (47), Expect = 9.2
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +3
Query: 522 QGWLAGVHTQFDTQKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSI 665
+GW +G+ QF ++ + GYQ D V++G F S+
Sbjct: 607 KGWTSGMPMQFYFIITPYTAKTYEQGYQY-DKTFTCGVESGMRFYDSL 653
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 730,292
Number of Sequences: 2352
Number of extensions: 15233
Number of successful extensions: 236
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 236
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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