Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20303
(756 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 43 3e-06
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 25 0.65
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 25 0.65
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 25 0.65
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 25 0.65
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 24 1.5
DQ855498-1|ABH88185.1| 127|Tribolium castaneum chemosensory pro... 23 2.6
AJ973445-1|CAJ01492.1| 127|Tribolium castaneum hypothetical pro... 23 2.6
AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory recept... 23 3.5
DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired pr... 22 6.1
AF260820-1|AAG02018.1| 139|Tribolium castaneum alpha-esterase l... 22 6.1
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 21 8.0
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 42.7 bits (96), Expect = 3e-06
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 9/93 (9%)
Frame = +1
Query: 256 TGKTATFSISILQQI---------DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 408
+GKTA F + I+ + + + + +I++PTRELA QI + K
Sbjct: 206 SGKTAAFMLPIIHNLLSDKNPPNTENNCAQPVVVIMSPTRELAIQIADQGKKFAYNSTVK 265
Query: 409 CHACIGGTNVREDIRQLEXGVHVVVGTPGRVYD 507
GGT+ ++ G H++V TPGR+ D
Sbjct: 266 VAVIYGGTSTNHQRGRILGGCHILVATPGRLKD 298
Score = 41.9 bits (94), Expect = 5e-06
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Frame = +3
Query: 510 ITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS----ADVQVILLSATMPDDVL 677
+ R + N++K FVLDEAD ML GF + ++ S + Q ++ SAT P++V
Sbjct: 300 VNRGNVSFNSLKYFVLDEADRMLDMGFLGDVEEMLSHQSMPATGERQTLMFSATFPEEVQ 359
Query: 678 EVS 686
+++
Sbjct: 360 QLA 362
Score = 27.9 bits (59), Expect = 0.093
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +2
Query: 173 FEKPSAIQQRAIMPCIQGRDVIAQAQS 253
+ KP+AIQ+ AI + GRD+++ AQ+
Sbjct: 178 YTKPTAIQKYAIPVILSGRDLMSCAQT 204
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 25.0 bits (52), Expect = 0.65
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 282 IDSTTNRYKHS*MSSFDPGSHKRAGTTNSEGGDSS 386
ID + + + MS+ G H G EGGD S
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDES 1189
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 25.0 bits (52), Expect = 0.65
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 282 IDSTTNRYKHS*MSSFDPGSHKRAGTTNSEGGDSS 386
ID + + + MS+ G H G EGGD S
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDES 1189
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 25.0 bits (52), Expect = 0.65
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 282 IDSTTNRYKHS*MSSFDPGSHKRAGTTNSEGGDSS 386
ID + + + MS+ G H G EGGD S
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDES 1189
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 25.0 bits (52), Expect = 0.65
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 282 IDSTTNRYKHS*MSSFDPGSHKRAGTTNSEGGDSS 386
ID + + + MS+ G H G EGGD S
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDES 1189
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 23.8 bits (49), Expect = 1.5
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = -1
Query: 459 QLANIFTDIGATNASMAFSIQVITKSYHHLLNLLCQLSCGSQDQSLTF 316
Q+AN TD + S+A S +++ H L + + G+Q +F
Sbjct: 207 QMANYSTDYSSLTHSLAASNHLLSSGQHLLQDTYKSMLPGAQTVGASF 254
>DQ855498-1|ABH88185.1| 127|Tribolium castaneum chemosensory
protein 12 protein.
Length = 127
Score = 23.0 bits (47), Expect = 2.6
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +3
Query: 423 WWHQCP*RYSPTGXW 467
WW++ +Y PTG +
Sbjct: 98 WWNELEAKYDPTGIY 112
>AJ973445-1|CAJ01492.1| 127|Tribolium castaneum hypothetical
protein protein.
Length = 127
Score = 23.0 bits (47), Expect = 2.6
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +3
Query: 423 WWHQCP*RYSPTGXW 467
WW++ +Y PTG +
Sbjct: 98 WWNELEAKYDPTGIY 112
>AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory receptor
candidate 9 protein.
Length = 408
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +1
Query: 367 QKVVIALGDHLNAKCHAC 420
+K IAL D N CH C
Sbjct: 261 EKSWIALNDDYNRLCHLC 278
>DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired
protein.
Length = 311
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = -1
Query: 87 VSQCPFPEVHRNYLDPSMAHFW 22
+++C F +V R+Y DP ++W
Sbjct: 137 LNKC-FVKVPRHYDDPGKGNYW 157
>AF260820-1|AAG02018.1| 139|Tribolium castaneum alpha-esterase like
protein E1 protein.
Length = 139
Score = 21.8 bits (44), Expect = 6.1
Identities = 9/37 (24%), Positives = 21/37 (56%)
Frame = -2
Query: 143 FFEVHVIEGFDNLIPVGVKCPSVHSRRSIVTTLILRW 33
FF+ ++I G +N + + V ++ + + +T +L W
Sbjct: 43 FFKKNLIVGSENCLVLNVYTKNLRTDTNRITQPVLFW 79
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 321 SSFDPGSHKRAGTTNSEGGD 380
+S P S R+GT S GD
Sbjct: 933 NSASPASSDRSGTPRSTNGD 952
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,621
Number of Sequences: 336
Number of extensions: 4379
Number of successful extensions: 22
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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