Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20303
         (756 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    49   2e-07
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    26   1.4  
AY344837-1|AAR05808.1|  221|Anopheles gambiae TEP4 protein.            24   5.8  
AY146757-1|AAO12072.1|  246|Anopheles gambiae odorant-binding pr...    24   5.8  
AJ618928-1|CAF02007.1|  285|Anopheles gambiae odorant-binding pr...    24   5.8  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 48.8 bits (111), Expect = 2e-07
 Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
 Frame = +1

Query: 256 TGKTATFSISILQQI-------DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCH 414
           +GKTA F + ++  +       +   R    +I+APTRELA QI             K  
Sbjct: 222 SGKTAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFAHGTKLKVC 281

Query: 415 ACIGGTNVREDIRQLEXGVHVVVGTPGRVYD 507
              GGT V+  ++ +  G HV+V TPGR+ D
Sbjct: 282 VSYGGTAVQHQLQLMRGGCHVLVATPGRLLD 312



 Score = 31.5 bits (68), Expect = 0.029
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
 Frame = +3

Query: 510 ITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS----ADVQVILLSATMPDDVL 677
           I R  +    +   VLDEAD ML  GF   I  V    +       Q ++ SAT P ++ 
Sbjct: 314 IDRGYVTFENVNFVVLDEADRMLDMGFLPSIEKVMGHATMPEKQQRQTLMFSATFPAEIQ 373

Query: 678 EVS 686
           E++
Sbjct: 374 ELA 376



 Score = 26.6 bits (56), Expect = 0.83
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +2

Query: 173 FEKPSAIQQRAIMPCIQGRDVIAQAQS 253
           + KP+ IQ+ AI   + GRD++A AQ+
Sbjct: 194 YTKPTPIQRYAIPIILNGRDLMACAQT 220


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = -2

Query: 731 LPSVQVCVQDLS*ASRYFQYIIRHGSRE*YDLNIS*QHLEDIMDLV 594
           L  V   V +L  A +YF Y+  HG +  Y++ ++        DL+
Sbjct: 775 LSVVLQAVHELGLAHKYFTYLSVHGDKTRYNIALAETEANQCQDLL 820


>AY344837-1|AAR05808.1|  221|Anopheles gambiae TEP4 protein.
          Length = 221

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 9   GPEDSKNGPSKDQGSY 56
           G   SKNGPS  Q S+
Sbjct: 103 GSSSSKNGPSNSQASF 118


>AY146757-1|AAO12072.1|  246|Anopheles gambiae odorant-binding
           protein AgamOBP39 protein.
          Length = 246

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = +2

Query: 176 EKPSAIQQRAIMPCIQGRDVIAQAQSELEKQLLSLYRFYNKSIQAFV 316
           +  S  ++RA + CI     + +AQ +  +  + LYR +   I A V
Sbjct: 193 QSESEFRRRANL-CIDANQPLLEAQDKNAQAYVKLYRCFADQISALV 238


>AJ618928-1|CAF02007.1|  285|Anopheles gambiae odorant-binding
           protein OBPjj83a protein.
          Length = 285

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = +2

Query: 176 EKPSAIQQRAIMPCIQGRDVIAQAQSELEKQLLSLYRFYNKSIQAFV 316
           +  S  ++RA + CI     + +AQ +  +  + LYR +   I A V
Sbjct: 232 QSESEFRRRANL-CIDANQPLLEAQDKNAQAYVKLYRCFADQISALV 277


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 864,685
Number of Sequences: 2352
Number of extensions: 19102
Number of successful extensions: 36
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)