Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20303
(756 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 139 2e-33
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 139 2e-33
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 120 1e-27
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 120 1e-27
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 82 5e-16
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 79 4e-15
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 75 7e-14
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 75 7e-14
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 59 4e-09
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 59 4e-09
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 59 4e-09
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 58 7e-09
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 58 9e-09
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 58 9e-09
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 57 2e-08
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 57 2e-08
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 55 5e-08
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 52 3e-07
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 52 3e-07
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 52 3e-07
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 52 4e-07
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 51 8e-07
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 51 1e-06
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 51 1e-06
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 51 1e-06
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 50 2e-06
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 50 2e-06
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 49 4e-06
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 47 1e-05
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 45 7e-05
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 42 5e-04
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 42 5e-04
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 41 0.001
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 41 0.001
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 41 0.001
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 40 0.003
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 40 0.003
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 40 0.003
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 38 0.006
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 37 0.013
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 37 0.013
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 37 0.013
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 36 0.023
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 36 0.023
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 36 0.023
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 33 0.17
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 33 0.17
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 30 1.5
U21308-11|AAB93312.3| 265|Caenorhabditis elegans Roller: helica... 29 2.7
U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helica... 29 2.7
M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein. 29 2.7
AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical ... 29 3.6
Z81461-1|CAB03833.1| 944|Caenorhabditis elegans Hypothetical pr... 28 6.2
AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical... 28 6.2
AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical... 28 6.2
AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical ... 28 6.2
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 28 8.2
U58742-4|AAB36856.1| 242|Caenorhabditis elegans Activated in bl... 28 8.2
U51993-1|AAB36851.2| 377|Caenorhabditis elegans Hypothetical pr... 28 8.2
AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric c... 28 8.2
AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical ... 28 8.2
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 139 bits (337), Expect = 2e-33
Identities = 63/84 (75%), Positives = 75/84 (89%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 435
TGKTATFSIS+LQ +DT +RE QALIL+PTRELA QIQKVV+ALGD++N +CHACIGGTN
Sbjct: 74 TGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTN 133
Query: 436 VREDIRQLEXGVHVVVGTPGRVYD 507
+ EDIR+L+ G HVV GTPGRV+D
Sbjct: 134 LGEDIRKLDYGQHVVSGTPGRVFD 157
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/59 (54%), Positives = 46/59 (77%)
Frame = +3
Query: 510 ITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVS 686
I RR L IKL VLDEADEML++GFK+Q++D+++ L QV+LLSAT+P ++LE++
Sbjct: 159 IRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLSATLPHEILEMT 217
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = +2
Query: 173 FEKPSAIQQRAIMPCIQGRDVIAQAQS 253
FEKPSAIQQRA+ ++ RDVIAQAQS
Sbjct: 46 FEKPSAIQQRAVPAILKARDVIAQAQS 72
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +3
Query: 108 VVETFDDMNLKEELLRGIYAYGLK 179
V+ TFD M L+E+LLRGIYAYG +
Sbjct: 24 VIPTFDKMGLREDLLRGIYAYGFE 47
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +2
Query: 686 SMLMRDPVRILVQKEELTLEGIK 754
S M DP+RILV+++ELTLEGIK
Sbjct: 218 SKFMTDPIRILVKRDELTLEGIK 240
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 139 bits (337), Expect = 2e-33
Identities = 63/84 (75%), Positives = 75/84 (89%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 435
TGKTATFSIS+LQ +DT +RE QALIL+PTRELA QIQKVV+ALGD++N +CHACIGGTN
Sbjct: 74 TGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTN 133
Query: 436 VREDIRQLEXGVHVVVGTPGRVYD 507
+ EDIR+L+ G HVV GTPGRV+D
Sbjct: 134 LGEDIRKLDYGQHVVSGTPGRVFD 157
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/59 (54%), Positives = 46/59 (77%)
Frame = +3
Query: 510 ITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVS 686
I RR L IKL VLDEADEML++GFK+Q++D+++ L QV+LLSAT+P ++LE++
Sbjct: 159 IRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLSATLPHEILEMT 217
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +2
Query: 173 FEKPSAIQQRAIMPCIQGRDVIAQAQS 253
FEKPSAIQQRAI ++ RDVIAQAQS
Sbjct: 46 FEKPSAIQQRAIPAILKARDVIAQAQS 72
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +3
Query: 108 VVETFDDMNLKEELLRGIYAYGLK 179
++ TFD M L+E+LLRGIYAYG +
Sbjct: 24 IIPTFDKMGLREDLLRGIYAYGFE 47
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +2
Query: 686 SMLMRDPVRILVQKEELTLEGIK 754
S M DP+RILV+++ELTLEGIK
Sbjct: 218 SKFMTDPIRILVKRDELTLEGIK 240
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 120 bits (289), Expect = 1e-27
Identities = 58/84 (69%), Positives = 69/84 (82%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 435
TGKTATFS+SILQ+ID QAL++APTRELAQQIQKV+ ALG++LN CIGGT+
Sbjct: 77 TGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTS 136
Query: 436 VREDIRQLEXGVHVVVGTPGRVYD 507
VR+D R+LE G+HVVVGTPGRV D
Sbjct: 137 VRDDQRKLEAGIHVVVGTPGRVGD 160
Score = 86.2 bits (204), Expect = 2e-17
Identities = 40/59 (67%), Positives = 50/59 (84%)
Frame = +3
Query: 510 ITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVS 686
I R AL + IK+FVLDEADEMLSRGFKDQI++VF+ + DVQV+LLSATMP +VL+V+
Sbjct: 162 INRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDVT 220
Score = 52.8 bits (121), Expect = 3e-07
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Frame = +3
Query: 81 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGLK--NLLQSSNAQ*CLASKDAM 233
G ++ ++DQVVE+FDDM LKEELLRGIY +G + + +Q C KD +
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVI 70
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/27 (81%), Positives = 25/27 (92%)
Frame = +2
Query: 173 FEKPSAIQQRAIMPCIQGRDVIAQAQS 253
FEKPSAIQ+RAI+PC G+DVIAQAQS
Sbjct: 49 FEKPSAIQKRAIVPCTTGKDVIAQAQS 75
Score = 36.7 bits (81), Expect = 0.018
Identities = 15/20 (75%), Positives = 20/20 (100%)
Frame = +2
Query: 695 MRDPVRILVQKEELTLEGIK 754
MR+P+RILV+K+ELTLEGI+
Sbjct: 224 MRNPIRILVKKDELTLEGIR 243
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 120 bits (289), Expect = 1e-27
Identities = 58/84 (69%), Positives = 69/84 (82%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 435
TGKTATFS+SILQ+ID QAL++APTRELAQQIQKV+ ALG++LN CIGGT+
Sbjct: 77 TGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTS 136
Query: 436 VREDIRQLEXGVHVVVGTPGRVYD 507
VR+D R+LE G+HVVVGTPGRV D
Sbjct: 137 VRDDQRKLEAGIHVVVGTPGRVGD 160
Score = 86.2 bits (204), Expect = 2e-17
Identities = 40/59 (67%), Positives = 50/59 (84%)
Frame = +3
Query: 510 ITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVS 686
I R AL + IK+FVLDEADEMLSRGFKDQI++VF+ + DVQV+LLSATMP +VL+V+
Sbjct: 162 INRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDVT 220
Score = 52.8 bits (121), Expect = 3e-07
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Frame = +3
Query: 81 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGLK--NLLQSSNAQ*CLASKDAM 233
G ++ ++DQVVE+FDDM LKEELLRGIY +G + + +Q C KD +
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVI 70
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/27 (81%), Positives = 25/27 (92%)
Frame = +2
Query: 173 FEKPSAIQQRAIMPCIQGRDVIAQAQS 253
FEKPSAIQ+RAI+PC G+DVIAQAQS
Sbjct: 49 FEKPSAIQKRAIVPCTTGKDVIAQAQS 75
Score = 36.7 bits (81), Expect = 0.018
Identities = 15/20 (75%), Positives = 20/20 (100%)
Frame = +2
Query: 695 MRDPVRILVQKEELTLEGIK 754
MR+P+RILV+K+ELTLEGI+
Sbjct: 224 MRNPIRILVKKDELTLEGIR 243
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 81.8 bits (193), Expect = 5e-16
Identities = 33/84 (39%), Positives = 55/84 (65%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 435
TGKT + I ++++I +++ QA+++ PTRELA Q ++ + L H+ K GGT+
Sbjct: 91 TGKTGAYCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTD 150
Query: 436 VREDIRQLEXGVHVVVGTPGRVYD 507
+R+DI +L VH+V+ TPGR+ D
Sbjct: 151 LRDDIMRLNGTVHLVIATPGRILD 174
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +3
Query: 543 KLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDV 674
K VLDEAD++LS+ F+ + + L + QV+L SAT P+ V
Sbjct: 187 KTLVLDEADKLLSQDFQGILDRLINFLPKERQVMLYSATFPNTV 230
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/27 (40%), Positives = 21/27 (77%)
Frame = +2
Query: 173 FEKPSAIQQRAIMPCIQGRDVIAQAQS 253
+EKPS IQ+ +I + G+D++A+A++
Sbjct: 63 WEKPSPIQEASIGVALTGQDILARAKN 89
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 78.6 bits (185), Expect = 4e-15
Identities = 35/49 (71%), Positives = 45/49 (91%)
Frame = +3
Query: 540 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVS 686
IK+FVLDEADEMLS+GFKDQI++VF+ + DVQV+LLSATMP +VL+V+
Sbjct: 131 IKMFVLDEADEMLSKGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDVT 179
Score = 45.6 bits (103), Expect = 4e-05
Identities = 29/83 (34%), Positives = 43/83 (51%)
Frame = +1
Query: 244 SPVRTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI 423
S +GKT I ILQ ID Q ++LAP R +AQ+ + + +LG +LN C+
Sbjct: 40 SQAGSGKTVISLIDILQGIDCEDAHLQVILLAPQRGMAQRAHEQLKSLGRNLNVNA-TCL 98
Query: 424 GGTNVREDIRQLEXGVHVVVGTP 492
G E+ + HV++GTP
Sbjct: 99 GFDTTAEN----DKISHVLMGTP 117
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +2
Query: 173 FEKPSAIQQRAIMPCIQGRDVIAQAQSELEKQLLSL 280
FEKPSAIQ+ A+ PC G+DV Q+Q+ K ++SL
Sbjct: 16 FEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISL 51
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/20 (80%), Positives = 20/20 (100%)
Frame = +2
Query: 695 MRDPVRILVQKEELTLEGIK 754
MRDP+RILV+K+ELTLEGI+
Sbjct: 183 MRDPIRILVKKDELTLEGIR 202
Score = 34.3 bits (75), Expect = 0.095
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +3
Query: 129 MNLKEELLRGIYAYGLK--NLLQSSNAQ*CLASKDAML 236
M LKEELLRGIY +G + + +Q S C KD +
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTI 38
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 74.5 bits (175), Expect = 7e-14
Identities = 39/84 (46%), Positives = 49/84 (58%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 435
TGKT F+I ILQ++ ALIL PTRELA QI + ALG + KC +GG +
Sbjct: 137 TGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRS 196
Query: 436 VREDIRQLEXGVHVVVGTPGRVYD 507
+ R+L HVVV TPGR+ D
Sbjct: 197 LIHQARELSERPHVVVATPGRLAD 220
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/45 (44%), Positives = 31/45 (68%)
Frame = +3
Query: 540 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDV 674
I+ FVLDEAD ML + DQ+ +F+ +S Q +LLSAT+ +++
Sbjct: 236 IQFFVLDEADRMLEGQYNDQLKPIFESISEKRQTLLLSATITNNI 280
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 74.5 bits (175), Expect = 7e-14
Identities = 39/84 (46%), Positives = 49/84 (58%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 435
TGKT F+I ILQ++ ALIL PTRELA QI + ALG + KC +GG +
Sbjct: 137 TGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRS 196
Query: 436 VREDIRQLEXGVHVVVGTPGRVYD 507
+ R+L HVVV TPGR+ D
Sbjct: 197 LIHQARELSERPHVVVATPGRLAD 220
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/45 (44%), Positives = 31/45 (68%)
Frame = +3
Query: 540 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDV 674
I+ FVLDEAD ML + DQ+ +F+ +S Q +LLSAT+ +++
Sbjct: 236 IQFFVLDEADRMLEGQYNDQLKPIFESISEKRQTLLLSATITNNI 280
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 58.8 bits (136), Expect = 4e-09
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Frame = +1
Query: 214 LHPRTRCYRSSPVRTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGD 393
+ P + + TGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G
Sbjct: 245 MEPPSNLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGK 304
Query: 394 HL-NAKCHACIGGTNVREDIRQLEXGVHVVVGTPGRVYD 507
+ N K H I G N+ +R + +V+GTPG D
Sbjct: 305 FIDNLKIHYAIKGGNMAA-MRGRKLTEQIVIGTPGITRD 342
Score = 31.5 bits (68), Expect = 0.67
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Frame = +3
Query: 519 RALHANTIKLFVLDEADEML-SRGFKDQIHDVFKML---SADVQVILLSATMPDDVL 677
+ + + I+ VLDEAD M+ +GF D ++ M+ S VQ +L SAT + V+
Sbjct: 348 KCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDASDSVQSMLFSATYDEPVI 404
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 58.8 bits (136), Expect = 4e-09
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Frame = +1
Query: 214 LHPRTRCYRSSPVRTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGD 393
+ P + + TGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G
Sbjct: 270 MEPPSNLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGK 329
Query: 394 HL-NAKCHACIGGTNVREDIRQLEXGVHVVVGTPGRVYD 507
+ N K H I G N+ +R + +V+GTPG D
Sbjct: 330 FIDNLKIHYAIKGGNMAA-MRGRKLTEQIVIGTPGITRD 367
Score = 31.5 bits (68), Expect = 0.67
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Frame = +3
Query: 519 RALHANTIKLFVLDEADEML-SRGFKDQIHDVFKML---SADVQVILLSATMPDDVL 677
+ + + I+ VLDEAD M+ +GF D ++ M+ S VQ +L SAT + V+
Sbjct: 373 KCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDASDSVQSMLFSATYDEPVI 429
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 58.8 bits (136), Expect = 4e-09
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Frame = +1
Query: 214 LHPRTRCYRSSPVRTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGD 393
+ P + + TGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G
Sbjct: 654 MEPPSNLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGK 713
Query: 394 HL-NAKCHACIGGTNVREDIRQLEXGVHVVVGTPGRVYD 507
+ N K H I G N+ +R + +V+GTPG D
Sbjct: 714 FIDNLKIHYAIKGGNMAA-MRGRKLTEQIVIGTPGITRD 751
Score = 31.5 bits (68), Expect = 0.67
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Frame = +3
Query: 519 RALHANTIKLFVLDEADEML-SRGFKDQIHDVFKML---SADVQVILLSATMPDDVL 677
+ + + I+ VLDEAD M+ +GF D ++ M+ S VQ +L SAT + V+
Sbjct: 757 KCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDASDSVQSMLFSATYDEPVI 813
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 58.0 bits (134), Expect = 7e-09
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECQA-----LILAPTRELAQQIQKVVIALGDHLNAKCHAC 420
+GKT F + L I + L+L PTRELAQQ+Q+V I L K
Sbjct: 177 SGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTCL 236
Query: 421 IGGTNVREDIRQLEXGVHVVVGTPGRVYD 507
GG + R LE GV +VV TPGR+ D
Sbjct: 237 FGGASKGPQARDLERGVDIVVATPGRLLD 265
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +3
Query: 552 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDV 674
VLDEAD ML GF+ QI + + D Q ++ SAT P +V
Sbjct: 281 VLDEADRMLDMGFEPQIKKIIGQIRPDRQTLMFSATWPKEV 321
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 57.6 bits (133), Expect = 9e-09
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDT-SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 432
+GKTA F I +LQ++ +AL+++PTRELA Q KVV LG +C +GG
Sbjct: 72 SGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGD 131
Query: 433 NVREDIRQLEXGVHVVVGTPGRV 501
+ E + +++ TPGR+
Sbjct: 132 QIEEQFSTIHENPDILLATPGRL 154
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/60 (30%), Positives = 33/60 (55%)
Frame = +3
Query: 510 ITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSR 689
I L + ++ V DEAD + GF+DQ+ + K + Q +L SAT+P +++ ++
Sbjct: 158 IVEMDLRLSYVQYVVFDEADRLFEMGFQDQLTETLKRIPESRQTLLFSATLPKMLVDFAK 217
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 57.6 bits (133), Expect = 9e-09
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDT-SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 432
+GKTA F I +LQ++ +AL+++PTRELA Q KVV LG +C +GG
Sbjct: 72 SGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGD 131
Query: 433 NVREDIRQLEXGVHVVVGTPGRV 501
+ E + +++ TPGR+
Sbjct: 132 QIEEQFSTIHENPDILLATPGRL 154
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/60 (30%), Positives = 33/60 (55%)
Frame = +3
Query: 510 ITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSR 689
I L + ++ V DEAD + GF+DQ+ + K + Q +L SAT+P +++ ++
Sbjct: 158 IVEMDLRLSYVQYVVFDEADRLFEMGFQDQLTETLKRIPESRQTLLFSATLPKMLVDFAK 217
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 56.8 bits (131), Expect = 2e-08
Identities = 30/84 (35%), Positives = 44/84 (52%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 435
+GKT F+I +LQ + + L+L PTRELA QI + ALG + +GG +
Sbjct: 92 SGKTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVD 151
Query: 436 VREDIRQLEXGVHVVVGTPGRVYD 507
+ L H++V TPGR+ D
Sbjct: 152 MAAQAMALARRPHIIVATPGRLVD 175
Score = 36.7 bits (81), Expect = 0.018
Identities = 15/57 (26%), Positives = 32/57 (56%)
Frame = +3
Query: 519 RALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSR 689
+ + +K ++DEAD +L+ F+ ++ + K++ + + L SATM V ++ R
Sbjct: 181 KGFNLKALKFLIMDEADRILNMDFEVELDKILKVIPRERRTYLFSATMTKKVSKLER 237
Score = 32.3 bits (70), Expect = 0.38
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2
Query: 164 RLWFEKPSAIQQRAIMPCIQGRDVIAQAQS 253
RL + KPS IQQ A+ +QG+DVI A++
Sbjct: 61 RLGWMKPSKIQQAALPHALQGKDVIGLAET 90
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 56.8 bits (131), Expect = 2e-08
Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 10/94 (10%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECQ----------ALILAPTRELAQQIQKVVIALGDHLNA 405
+GKTA F + +L I TS+ + + A+I+APTRELAQQI++ G L
Sbjct: 349 SGKTAAFLLPLLVWI-TSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLLGI 407
Query: 406 KCHACIGGTNVREDIRQLEXGVHVVVGTPGRVYD 507
K + IGG + + +L GV VV+ TPGR+ D
Sbjct: 408 KTVSVIGGASREDQGMKLRMGVEVVIATPGRLLD 441
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 510 ITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 623
+ R L N +LDEAD ML GF+ + V + +
Sbjct: 443 LENRYLLLNQCTYVILDEADRMLDMGFEPDVQKVLEYM 480
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 55.2 bits (127), Expect = 5e-08
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIR--EC-QALILAPTRELAQQIQKVVIALGDHLNAKCHACIG 426
TGKTA F + IL+++ + C + L+L PTRELA Q+ +V L + + C G
Sbjct: 196 TGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAG 255
Query: 427 GTNVREDIRQLEXGVHVVVGTPGRVYD 507
G +++ L G VVV TPGR+ D
Sbjct: 256 GLDLKAQEAALRSGPDVVVATPGRLID 282
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/58 (32%), Positives = 38/58 (65%)
Frame = +3
Query: 513 TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVS 686
+R+ ++ VLDEAD ML F+DQ++++ ++ + + Q +L SATM +++ E++
Sbjct: 310 SRKICKIPNFQVLVLDEADRMLEEAFRDQMNELIRLCAQNRQTLLFSATMTEEIDELA 367
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 54.0 bits (124), Expect = 1e-07
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Frame = +1
Query: 244 SPVRTGKTATFSISILQQIDTSI---RECQALILAPTRELAQQIQKVVIALGDHLNAKCH 414
SP +GKT F + +++ I + + ALIL+P+REL QI V+ + LN
Sbjct: 53 SPTGSGKTLAFVLPMMRMIQNAKLQPADIGALILSPSRELCSQIVSVIQPFAEKLNLTVE 112
Query: 415 ACIGGTNVREDIRQLE-XGVHVVVGTPGRVY 504
GG V ++I+ + V+++V TPGR++
Sbjct: 113 TVTGGQKVDKNIKMFKNKNVNILVATPGRLF 143
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 537 TIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSAT 659
T++L V+DEAD F+D + ++ + + L SAT
Sbjct: 159 TLQLLVIDEADRFNEIQFEDHMREILSCIPKQRRTGLFSAT 199
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 52.4 bits (120), Expect = 3e-07
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Frame = +1
Query: 259 GKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTN 435
GKTA F I+ LQQ++ E + + TRELA QI K +L K GG
Sbjct: 90 GKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMA 149
Query: 436 VREDIRQLEXGV-HVVVGTPGRV 501
+++D +L H+VVGTPGR+
Sbjct: 150 IKKDEERLANDCPHIVVGTPGRM 172
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +3
Query: 525 LHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSR 689
L + +K FVLDE D+M+ + + ++ KM QV++ SAT+P ++ V +
Sbjct: 181 LKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMMFSATLPKELRTVCK 236
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 52.4 bits (120), Expect = 3e-07
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Frame = +1
Query: 259 GKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTN 435
GKTA F I+ LQQ++ E + + TRELA QI K +L K GG
Sbjct: 90 GKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMA 149
Query: 436 VREDIRQLEXGV-HVVVGTPGRV 501
+++D +L H+VVGTPGR+
Sbjct: 150 IKKDEERLANDCPHIVVGTPGRM 172
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +3
Query: 525 LHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSR 689
L + +K FVLDE D+M+ + + ++ KM QV++ SAT+P ++ V +
Sbjct: 181 LKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMMFSATLPKELRTVCK 236
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 52.4 bits (120), Expect = 3e-07
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Frame = +1
Query: 259 GKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTN 435
GKTA F I+ LQQ++ E + + TRELA QI K +L K GG
Sbjct: 89 GKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMA 148
Query: 436 VREDIRQLEXGV-HVVVGTPGRV 501
+++D +L H+VVGTPGR+
Sbjct: 149 IKKDEERLANDCPHIVVGTPGRM 171
Score = 31.5 bits (68), Expect = 0.67
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +3
Query: 525 LHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSR 689
L + +K FVLDE D+M+ G D DV ++ QV++ SAT+P ++ V +
Sbjct: 180 LKLDKVKYFVLDECDKMI--GDADMRRDVQEI----KQVMMFSATLPKELRTVCK 228
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 52.4 bits (120), Expect = 3e-07
Identities = 33/89 (37%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Frame = +1
Query: 256 TGKTATFSISILQQI--DTSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNAKCHAC 420
+GKT F + + + I + E A+ILAPTRELA Q K L K
Sbjct: 352 SGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKVACT 411
Query: 421 IGGTNVREDIRQLEXGVHVVVGTPGRVYD 507
GG + E I L+ G +VV TPGR+ D
Sbjct: 412 YGGVGISEQIADLKRGAEIVVCTPGRMID 440
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +3
Query: 540 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSR 689
+ VLDEAD M +GF+ QI V + D Q +L SAT P + ++R
Sbjct: 455 VTYLVLDEADRMFDKGFEPQIMKVVNNIRPDKQTVLFSATFPRHMEALAR 504
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 173 FEKPSAIQQRAIMPCIQGRDVIAQAQSELEKQLLSL 280
+ KP++IQ +AI + GRDVI A++ K L L
Sbjct: 324 YSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFL 359
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 52.0 bits (119), Expect = 4e-07
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 6/66 (9%)
Frame = +1
Query: 328 LILAPTRELAQQIQKVVIALGDHLNA------KCHACIGGTNVREDIRQLEXGVHVVVGT 489
LI+ P+RELA+QI ++I + D L + CIGG + E + + G+H+VV T
Sbjct: 270 LIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGIHIVVAT 329
Query: 490 PGRVYD 507
PGR+ D
Sbjct: 330 PGRLSD 335
Score = 51.2 bits (117), Expect = 8e-07
Identities = 22/52 (42%), Positives = 32/52 (61%)
Frame = +3
Query: 510 ITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMP 665
+T++ ++ + VLDEAD ML GF+D+I +F A Q +L SATMP
Sbjct: 337 LTKKIINLEVCRYLVLDEADRMLDMGFEDEIKSIFYFFKAQRQTLLFSATMP 388
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 51.2 bits (117), Expect = 8e-07
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Frame = +1
Query: 220 PRTRCYRSSPVRTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 399
P T+ + G +S + ID+S C +IL PTREL QQ + + L
Sbjct: 251 PGTQYVAVAQAEDGNLKWWSAAEQLSIDSSTPLC--VILEPTRELVQQTFQNIQTFASVL 308
Query: 400 NA---KCHACIGGTNVREDIRQLEXGVHVVVGTPGRVYD 507
++ +C G N+ + +R LE G +VVGTP RV+D
Sbjct: 309 DSPKIRCVTLAAGENMNQILRTLETGCDIVVGTPSRVFD 347
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +1
Query: 325 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT-NVREDIRQLEXGVHVVVGTPGRV 501
AL+L+PTRELA QI K N + GG N R+ + +L G H+++ TPGR+
Sbjct: 225 ALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRL 284
Query: 502 YD 507
D
Sbjct: 285 ID 286
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 543 KLFVLDEADEMLSRGFKDQIHDV 611
+ VLDEAD ML GF+ QI +
Sbjct: 299 RYLVLDEADRMLDMGFEPQIRKI 321
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +1
Query: 325 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT-NVREDIRQLEXGVHVVVGTPGRV 501
AL+L+PTRELA QI K N + GG N R+ + +L G H+++ TPGR+
Sbjct: 209 ALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRL 268
Query: 502 YD 507
D
Sbjct: 269 ID 270
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 543 KLFVLDEADEMLSRGFKDQIHDV 611
+ VLDEAD ML GF+ QI +
Sbjct: 283 RYLVLDEADRMLDMGFEPQIRKI 305
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +1
Query: 325 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT-NVREDIRQLEXGVHVVVGTPGRV 501
AL+L+PTRELA QI K N + GG N R+ + +L G H+++ TPGR+
Sbjct: 206 ALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRL 265
Query: 502 YD 507
D
Sbjct: 266 ID 267
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 543 KLFVLDEADEMLSRGFKDQIHDV 611
+ VLDEAD ML GF+ QI +
Sbjct: 280 RYLVLDEADRMLDMGFEPQIRKI 302
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 435
TGKT FS+ ++ +D+ Q +I+ PTRE++ QI++ V + A+ +GG+
Sbjct: 70 TGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSVYVGGSA 128
Query: 436 VREDIRQL-EXGVHVVVGTPGRV 501
+ ++ L + +V+GTPGR+
Sbjct: 129 HKLNLIDLKQTRPQIVIGTPGRI 151
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +3
Query: 522 ALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMP 665
A++ + + FVLDEAD+++ F+D I+ + L QV + SAT P
Sbjct: 159 AMNMSHVDFFVLDEADKLMDEVFRDDINIIINSLPQIRQVAVFSATYP 206
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +2
Query: 140 RRIVERHIRLWFEKPSAIQQRAIMPCIQGRDVIAQAQSELEKQLL 274
++ +ER F++PS +Q RAI + GRD++ QA+S K L+
Sbjct: 31 QKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLV 75
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +1
Query: 256 TGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 435
TGKT FS+ ++ +D+ Q +I+ PTRE++ QI++ V + A+ +GG+
Sbjct: 70 TGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSVYVGGSA 128
Query: 436 VREDIRQL-EXGVHVVVGTPGRV 501
+ ++ L + +V+GTPGR+
Sbjct: 129 HKLNLIDLKQTRPQIVIGTPGRI 151
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +3
Query: 522 ALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMP 665
A++ + + FVLDEAD+++ F+D I+ + L QV + SAT P
Sbjct: 159 AMNMSHVDFFVLDEADKLMDEVFRDDINIIINSLPQIRQVAVFSATYP 206
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +2
Query: 140 RRIVERHIRLWFEKPSAIQQRAIMPCIQGRDVIAQAQSELEKQLL 274
++ +ER F++PS +Q RAI + GRD++ QA+S K L+
Sbjct: 31 QKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLV 75
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/59 (40%), Positives = 38/59 (64%)
Frame = +1
Query: 325 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLEXGVHVVVGTPGRV 501
ALI++PTRELA Q + A+G H C IGG++V + ++ G++++V TPGR+
Sbjct: 151 ALIISPTRELALQTFSTINAVGAHHGFSCGLVIGGSDVAFERNRIS-GINIIVCTPGRL 208
Score = 44.8 bits (101), Expect = 7e-05
Identities = 20/55 (36%), Positives = 34/55 (61%)
Frame = +3
Query: 525 LHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSR 689
+ +++++ VLDEAD ML GF Q++ + L A+ Q +L SAT +V ++ R
Sbjct: 218 MSCDSLQVLVLDEADRMLDMGFSKQLNSIINNLPAERQTLLFSATQTRNVKDLCR 272
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 47.2 bits (107), Expect = 1e-05
Identities = 34/104 (32%), Positives = 48/104 (46%), Gaps = 12/104 (11%)
Frame = +1
Query: 232 CYRSSPVRTGKTATFSISILQQIDTSIRECQ-----------ALILAPTRELAQQIQKVV 378
C S +GKT F + L ID + + + L+L+PTRELAQQI+ V
Sbjct: 124 CIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEV 183
Query: 379 IALGDHLNAKCHACI-GGTNVREDIRQLEXGVHVVVGTPGRVYD 507
N C+ GG + E + GV +V+ TPGR+ D
Sbjct: 184 KKYS--YNGYKSVCLYGGGSRPEQVEACRGGVEIVIATPGRLTD 225
Score = 35.9 bits (79), Expect = 0.031
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +3
Query: 537 TIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVS 686
++ VLDEAD ML GF+ I + + D V L SAT P+ V +++
Sbjct: 236 SVTYVVLDEADRMLDMGFEVAIRRILFEIRPDRLVALTSATWPEGVRKLT 285
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 44.8 bits (101), Expect = 7e-05
Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 4/116 (3%)
Frame = +1
Query: 241 SSPVRTGKTATF---SISILQQIDTSIRE-CQALILAPTRELAQQIQKVVIALGDHLNAK 408
S+ +GKT F +I +L +++ +I++PTREL+ Q V+ L + N
Sbjct: 111 SAKTGSGKTLAFLLPAIELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSELLEGSNLT 170
Query: 409 CHACIGGTNVREDIRQLEXGVHVVVGTPGRVYDR*LVVRFMPTPSNFLFLMKLMKC 576
+GG+N + +L GV ++V TPGR+ D + N FL++ MKC
Sbjct: 171 YGLVMGGSNRSAEKDKLAKGVSILVATPGRLLDH------LQNTDN--FLVRNMKC 218
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +3
Query: 540 IKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEV 683
+K ++DEAD +L GF+ ++ V + L Q +L SAT V E+
Sbjct: 216 MKCLIIDEADRILDIGFEIEMQQVLRHLPKQRQSMLFSATHSPKVDEL 263
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 41.9 bits (94), Expect = 5e-04
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Frame = +1
Query: 259 GKTATFSISILQQI-----DTSIRECQ-----ALILAPTRELAQQIQKVVIALGDHLNAK 408
GKTA F + I+ +I +T + Q ALILAPTRELA QI + + + +
Sbjct: 430 GKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHEALRTYCQNTDII 489
Query: 409 CHACIGGTNVREDIRQLEXGVHVVVGTPGRVYD 507
G ++ + ++ G +++GT GR+ D
Sbjct: 490 VLLSYGQSDRARSLNEIRNGCDILIGTCGRIMD 522
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 41.9 bits (94), Expect = 5e-04
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Frame = +1
Query: 256 TGKTATFSISILQQI-------DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCH 414
+GKT F I ++Q++ D S+ A+I+APT+EL QI K+ + L L
Sbjct: 137 SGKTGAFLIPLVQKLIAESKTNDGSVGP-SAVIIAPTKELITQIYKLFVKLSQALPFLQA 195
Query: 415 ACIGGTNVREDIRQLEXGVHVVVGTPGRV 501
+ N E+ LE HVVV TPG++
Sbjct: 196 INLCDINEEENSVWLEDRSHVVVTTPGKL 224
Score = 36.3 bits (80), Expect = 0.023
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +3
Query: 519 RALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSR 689
R + + V+DEAD +LS G+++++ + L Q ++ SAT+ DD+ + +
Sbjct: 231 RPEYCTLVSYLVMDEADLLLSFGYEEEMIKIRSKLPPTYQCLMTSATLKDDMTTLKK 287
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +1
Query: 304 TSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG-TNVREDIRQLEXGVHVV 480
T +R +ALI+APTREL QI K + AL + +GG V+++ + +V
Sbjct: 64 TEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQRPDIV 123
Query: 481 VGTPGRVY 504
V TPGR++
Sbjct: 124 VATPGRLW 131
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +1
Query: 304 TSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG-TNVREDIRQLEXGVHVV 480
T +R +ALI+APTREL QI K + AL + +GG V+++ + +V
Sbjct: 231 TEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQRPDIV 290
Query: 481 VGTPGRVY 504
V TPGR++
Sbjct: 291 VATPGRLW 298
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 325 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT-NVREDIRQLEXGVHVVVGTPGRV 501
AL+L+PTREL+ QI GG N ++ I +L G H+++ TPGR+
Sbjct: 253 ALVLSPTRELSLQIFNESRKFAYRTPITSALLYGGRENYKDQIHKLRLGCHILIATPGRL 312
Query: 502 YD 507
D
Sbjct: 313 ID 314
Score = 32.7 bits (71), Expect = 0.29
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +3
Query: 543 KLFVLDEADEMLSRGFKDQIHDVF---KMLSADVQV-ILLSATMPDDV 674
+ VLDEAD ML GF+ QI + +M S + ++ + SAT P ++
Sbjct: 327 RYLVLDEADRMLDMGFEPQIRQIVECNRMPSKEERITAMFSATFPKEI 374
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 39.5 bits (88), Expect = 0.003
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Frame = +1
Query: 256 TGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQIQKVVIALGDHLNAK 408
+GKTA F + I+ ++ D ++ + +IL PTRELA QI +
Sbjct: 389 SGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMME 448
Query: 409 CHACIGGTNVREDIRQLEXGVHVVVGTPGRV 501
GG V + Q+E G ++VGT GR+
Sbjct: 449 IKPVYGGLAVGYNKGQIEKGATIIVGTVGRI 479
Score = 33.9 bits (74), Expect = 0.13
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Frame = +3
Query: 543 KLFVLDEADEML-SRGFKDQIHDVFKMLSA----DVQVILLSATMPDDVLEVSR 689
+ FVLDEAD M+ + GF I + S + Q ++ SAT PD V E +R
Sbjct: 494 RFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTLMFSATFPDSVQEAAR 547
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 39.5 bits (88), Expect = 0.003
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Frame = +1
Query: 256 TGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQIQKVVIALGDHLNAK 408
+GKTA F + I+ ++ D ++ + +IL PTRELA QI +
Sbjct: 389 SGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMME 448
Query: 409 CHACIGGTNVREDIRQLEXGVHVVVGTPGRV 501
GG V + Q+E G ++VGT GR+
Sbjct: 449 IKPVYGGLAVGYNKGQIEKGATIIVGTVGRI 479
Score = 33.9 bits (74), Expect = 0.13
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Frame = +3
Query: 543 KLFVLDEADEML-SRGFKDQIHDVFKMLSA----DVQVILLSATMPDDVLEVSR 689
+ FVLDEAD M+ + GF I + S + Q ++ SAT PD V E +R
Sbjct: 494 RFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTLMFSATFPDSVQEAAR 547
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 39.5 bits (88), Expect = 0.003
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Frame = +1
Query: 256 TGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQIQKVVIALGDHLNAK 408
+GKTA F + I+ ++ D ++ + +IL PTRELA QI +
Sbjct: 389 SGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMME 448
Query: 409 CHACIGGTNVREDIRQLEXGVHVVVGTPGRV 501
GG V + Q+E G ++VGT GR+
Sbjct: 449 IKPVYGGLAVGYNKGQIEKGATIIVGTVGRI 479
Score = 33.9 bits (74), Expect = 0.13
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Frame = +3
Query: 543 KLFVLDEADEML-SRGFKDQIHDVFKMLSA----DVQVILLSATMPDDVLEVSR 689
+ FVLDEAD M+ + GF I + S + Q ++ SAT PD V E +R
Sbjct: 494 RFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTLMFSATFPDSVQEAAR 547
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/59 (38%), Positives = 32/59 (54%)
Frame = +1
Query: 325 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLEXGVHVVVGTPGRV 501
A+I+APT+EL QI K+ + L L + N E+ LE HVVV TPG++
Sbjct: 99 AVIIAPTKELITQIYKLFVKLSQALPFLQAINLCDINEEENSVWLEDRSHVVVTTPGKL 157
Score = 36.3 bits (80), Expect = 0.023
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +3
Query: 519 RALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSR 689
R + + V+DEAD +LS G+++++ + L Q ++ SAT+ DD+ + +
Sbjct: 164 RPEYCTLVSYLVMDEADLLLSFGYEEEMIKIRSKLPPTYQCLMTSATLKDDMTTLKK 220
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 37.1 bits (82), Expect = 0.013
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Frame = +1
Query: 256 TGKTATFS----ISILQQIDTSIRECQ-ALILAPTRELAQQIQKVVIALGDHLNAKCHAC 420
+GKTA + + I+ Q D E A+I+ PTRELA Q+ + N
Sbjct: 313 SGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPICA 372
Query: 421 IGGTNVREDIRQLEX-GVHVVVGTPGRVYD 507
GG + E +L+ G +VV TPGR+ D
Sbjct: 373 YGGGSKWEQSNELQNEGAEMVVCTPGRIID 402
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +3
Query: 552 VLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDVLEVSR 689
V DEAD M GF+ Q+ + + D Q ++ SAT V ++R
Sbjct: 418 VFDEADRMFDMGFEAQVKSISDHVRPDRQCLMFSATFKQKVERLAR 463
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 37.1 bits (82), Expect = 0.013
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Frame = +1
Query: 256 TGKTATFSISILQQI----DTSIRE---C--QALILAPTRELAQQIQKVVIALGDHLNAK 408
+GKTA F + I+ ++ D + C + +IL PTRELA QI +
Sbjct: 346 SGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVME 405
Query: 409 CHACIGGTNVREDIRQLEXGVHVVVGTPGRV 501
GG NV + Q+ G ++VGT GRV
Sbjct: 406 IKPVYGGINVGYNKSQIMKGCTIIVGTIGRV 436
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 37.1 bits (82), Expect = 0.013
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Frame = +1
Query: 256 TGKTATFSISILQQI----DTSIRE---C--QALILAPTRELAQQIQKVVIALGDHLNAK 408
+GKTA F + I+ ++ D + C + +IL PTRELA QI +
Sbjct: 346 SGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVME 405
Query: 409 CHACIGGTNVREDIRQLEXGVHVVVGTPGRV 501
GG NV + Q+ G ++VGT GRV
Sbjct: 406 IKPVYGGINVGYNKSQIMKGCTIIVGTIGRV 436
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 36.3 bits (80), Expect = 0.023
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 9/91 (9%)
Frame = +1
Query: 256 TGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQIQKVVIALGDHLNAK 408
+GKTA F + I+ ++ + + + +IL PTREL QI +
Sbjct: 600 SGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMME 659
Query: 409 CHACIGGTNVREDIRQLEXGVHVVVGTPGRV 501
GG V + Q+E G ++VGT GR+
Sbjct: 660 IRPVYGGLAVGYNKGQIEKGATIIVGTVGRI 690
Score = 33.9 bits (74), Expect = 0.13
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Frame = +3
Query: 543 KLFVLDEADEML-SRGFKDQIHDVFKMLSA----DVQVILLSATMPDDVLEVSR 689
+ FVLDEAD M+ + GF I + S + Q ++ SAT PD V E +R
Sbjct: 705 RFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTLMFSATFPDSVQEAAR 758
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 36.3 bits (80), Expect = 0.023
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 9/91 (9%)
Frame = +1
Query: 256 TGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQIQKVVIALGDHLNAK 408
+GKTA F + I+ ++ + + + +IL PTREL QI +
Sbjct: 600 SGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMME 659
Query: 409 CHACIGGTNVREDIRQLEXGVHVVVGTPGRV 501
GG V + Q+E G ++VGT GR+
Sbjct: 660 IRPVYGGLAVGYNKGQIEKGATIIVGTVGRI 690
Score = 33.9 bits (74), Expect = 0.13
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Frame = +3
Query: 543 KLFVLDEADEML-SRGFKDQIHDVFKMLSA----DVQVILLSATMPDDVLEVSR 689
+ FVLDEAD M+ + GF I + S + Q ++ SAT PD V E +R
Sbjct: 705 RFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTLMFSATFPDSVQEAAR 758
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 36.3 bits (80), Expect = 0.023
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 9/91 (9%)
Frame = +1
Query: 256 TGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQIQKVVIALGDHLNAK 408
+GKTA F + I+ ++ + + + +IL PTREL QI +
Sbjct: 600 SGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMME 659
Query: 409 CHACIGGTNVREDIRQLEXGVHVVVGTPGRV 501
GG V + Q+E G ++VGT GR+
Sbjct: 660 IRPVYGGLAVGYNKGQIEKGATIIVGTVGRI 690
Score = 33.9 bits (74), Expect = 0.13
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Frame = +3
Query: 543 KLFVLDEADEML-SRGFKDQIHDVFKMLSA----DVQVILLSATMPDDVLEVSR 689
+ FVLDEAD M+ + GF I + S + Q ++ SAT PD V E +R
Sbjct: 705 RFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTLMFSATFPDSVQEAAR 758
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +1
Query: 328 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE--XGVHVVVGTPGRV 501
LI+APTREL Q L KC GG + +++ L ++++V T GR+
Sbjct: 818 LIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVATMGRL 877
Query: 502 YD 507
D
Sbjct: 878 QD 879
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +1
Query: 328 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLE--XGVHVVVGTPGRV 501
LI+APTREL Q L KC GG + +++ L ++++V T GR+
Sbjct: 818 LIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVATMGRL 877
Query: 502 YD 507
D
Sbjct: 878 QD 879
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -3
Query: 481 PXHEHXSPVGEYLHG-HWCHQCKHGI*HSSDH 389
P HEH G++ HG H H HG HS H
Sbjct: 635 PHHEHHEHHGDHHHGSHGVHHGHHGTHHSLAH 666
>U21308-11|AAB93312.3| 265|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 8, isoform b
protein.
Length = 265
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = +3
Query: 9 GPEDSKNGPSKDQGSYDGPPGM--DTGT 86
GP K P D SY GPPG D+GT
Sbjct: 201 GPPGPKGNPGPDGQSYQGPPGPPGDSGT 228
>U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 8, isoform a
protein.
Length = 329
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = +3
Query: 9 GPEDSKNGPSKDQGSYDGPPGM--DTGT 86
GP K P D SY GPPG D+GT
Sbjct: 265 GPPGPKGNPGPDGQSYQGPPGPPGDSGT 292
>M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein.
Length = 329
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = +3
Query: 9 GPEDSKNGPSKDQGSYDGPPGM--DTGT 86
GP K P D SY GPPG D+GT
Sbjct: 265 GPPGPKGNPGPDGQSYQGPPGPPGDSGT 292
>AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical
protein C41D11.7 protein.
Length = 625
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +1
Query: 247 PVRTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHA-CI 423
P TGKT T ++ + + I ++ Q ++LAPTRE I+ + + K H +
Sbjct: 90 PPGTGKTFTLTLLLCRLIQ---QKKQVVVLAPTREALANIRMMTKKTLKRMGIKVHEHAL 146
Query: 424 GGTNVREDI 450
TN D+
Sbjct: 147 MDTNEYRDV 155
>Z81461-1|CAB03833.1| 944|Caenorhabditis elegans Hypothetical
protein C04F12.1 protein.
Length = 944
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 216 ASKDAMLSLKPSQNWKNSYFLYIDST-TNRYKHS*MSSFDPGSHKRAGTTNSEGGD 380
A +A+ KP + NSY L + T RY S + SFD + S+GGD
Sbjct: 76 AQLEALAKNKPVKVTTNSYELELKPTPVFRYDVSVLKSFDDSTRDPIELAGSKGGD 131
>AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical
protein Y105E8A.24b protein.
Length = 1127
Score = 28.3 bits (60), Expect = 6.2
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +1
Query: 190 NPATRNN-ALHPRTRCYRSSPVRTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 366
N T++ AL R R + T S+ +L++ + IRE Q +LA ELA++
Sbjct: 1013 NALTKSRCALLERVRGGGAMMTSTATAVDDSMEMLRKKEKEIRELQQKVLADRDELAEK- 1071
Query: 367 QKVVIALGDHLNAK 408
QK + A + + K
Sbjct: 1072 QKAIDAQEEEIQTK 1085
>AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical
protein Y105E8A.24a protein.
Length = 1161
Score = 28.3 bits (60), Expect = 6.2
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +1
Query: 190 NPATRNN-ALHPRTRCYRSSPVRTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 366
N T++ AL R R + T S+ +L++ + IRE Q +LA ELA++
Sbjct: 1013 NALTKSRCALLERVRGGGAMMTSTATAVDDSMEMLRKKEKEIRELQQKVLADRDELAEK- 1071
Query: 367 QKVVIALGDHLNAK 408
QK + A + + K
Sbjct: 1072 QKAIDAQEEEIQTK 1085
>AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical
protein Y106G6D.7 protein.
Length = 948
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 9 GPEDSKNGPSKDQGSYDGPPGMDTG 83
GP + NGP + QG + G G D G
Sbjct: 801 GPNNFNNGPPEQQGQFRGNQGNDGG 825
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 10/57 (17%)
Frame = +1
Query: 223 RTRCYRSSPVRTGKTATFSISILQQI----------DTSIRECQALILAPTRELAQQ 363
R S+P +GKT F++ ++ +I ++ + A++L PTRELA Q
Sbjct: 163 RRNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>U58742-4|AAB36856.1| 242|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 3 protein.
Length = 242
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -1
Query: 357 CQLSCGSQDQSLTFTNACIDLL*NRYRESSCFSSSDWA 244
CQ SC +Q +S F N C + SSC +S+ A
Sbjct: 23 CQQSCQNQCKSAPFVNQCQSSCQQNCQTSSCSASATLA 60
>U51993-1|AAB36851.2| 377|Caenorhabditis elegans Hypothetical
protein F56F10.2 protein.
Length = 377
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = -3
Query: 604 WIWSLKPLDNISS-ASSRTKSLMVLA*SARRVIYHIHDLECPPXH 473
W W+ +N S A +RT + +L V+Y I + CP H
Sbjct: 127 WKWNATIGENASELARTRTDQIRILFDEGEVVVYPIDEKRCPVRH 171
>AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 1 protein.
Length = 1475
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -3
Query: 706 RISHKHRDTSNTSSGMVAESNMT*TSADNILKTSWIWSLKPLDNIS 569
R+ + + TSSG +A+SN+ T ++ + S S+ P DN S
Sbjct: 34 RLGREPKRIFGTSSGNMADSNLEETCLEHDSRPSSASSITPADNTS 79
>AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical
protein Y5H2A.4 protein.
Length = 558
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -1
Query: 357 CQLSCGSQDQSLTFTNACIDLL*NRYRESSCFS 259
CQ SC Q QS F N C + SSC++
Sbjct: 108 CQQSCQMQCQSAPFVNECQSQCQQSCQTSSCYA 140
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,715,355
Number of Sequences: 27780
Number of extensions: 415679
Number of successful extensions: 1228
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 1093
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1198
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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