Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20298
         (617 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    24   1.2  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   3.6  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      22   3.6  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   4.7  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    22   4.7  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   8.3  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 530 IFNCISHANYRVIFNIDNIMSVCM 601
           IFNC S  ++R+ F I N+  V +
Sbjct: 104 IFNCCSKKSFRMNFAIFNLYMVLL 127


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
 Frame = -1

Query: 521 SPSINT--IIASNIKRFPNFWIIMTNNNSYN 435
           SP + T  +   ++KRF  FW     N S N
Sbjct: 436 SPELKTGSLEEISVKRFVKFWTNFARNGSPN 466


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
 Frame = -1

Query: 521 SPSINT--IIASNIKRFPNFWIIMTNNNSYN 435
           SP + T  +   ++KRF  FW     N S N
Sbjct: 438 SPELKTGSLEEISVKRFVKFWTNFARNGSPN 468


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -1

Query: 491 NIKRFPNFWIIMTNNNSYN 435
           ++KRF  FW     N S N
Sbjct: 448 SVKRFVKFWTNFARNGSPN 466


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -1

Query: 491 NIKRFPNFWIIMTNNNSYN 435
           ++KRF  FW     N S N
Sbjct: 450 SVKRFVKFWTNFARNGSPN 468


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +2

Query: 26  FLSVNITRPIF*LTF*YLANVYFSFNASLNMLCRLMD 136
           F +  +T PIF L + Y  +  F+        CR  D
Sbjct: 145 FFAQGLTSPIFNLVYVYCCDNNFNVFLRQVFTCRCKD 181


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,633
Number of Sequences: 336
Number of extensions: 2697
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)