Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20297
(549 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D567E5 Cluster: PREDICTED: similar to CG5422-PB,... 89 5e-17
UniRef50_Q8IMX4 Cluster: CG5422-PD, isoform D; n=14; Endopterygo... 84 2e-15
UniRef50_Q01085 Cluster: Nucleolysin TIAR; n=67; Euteleostomi|Re... 71 2e-11
UniRef50_A7SUY1 Cluster: Predicted protein; n=1; Nematostella ve... 62 8e-09
UniRef50_Q95QV8 Cluster: Putative uncharacterized protein; n=6; ... 60 4e-08
UniRef50_Q5KHU8 Cluster: MRNA catabolism, nonsense-mediated-rela... 57 2e-07
UniRef50_P31483 Cluster: Nucleolysin TIA-1 isoform p40 (RNA-bind... 56 4e-07
UniRef50_Q59G98 Cluster: TIA1 protein variant; n=5; Euteleostomi... 56 7e-07
UniRef50_A2QQZ9 Cluster: Similarity to oligouridylate binding pr... 50 4e-05
UniRef50_Q9U2F5 Cluster: Putative uncharacterized protein; n=2; ... 49 8e-05
UniRef50_UPI0000E47D9B Cluster: PREDICTED: similar to TIA1 cytot... 48 1e-04
UniRef50_Q3ECQ4 Cluster: Uncharacterized protein At1g54080.2; n=... 46 6e-04
UniRef50_UPI0000D578A0 Cluster: PREDICTED: similar to CG12870-PA... 45 0.001
UniRef50_Q9LNS1 Cluster: F1L3.2; n=1; Arabidopsis thaliana|Rep: ... 44 0.002
UniRef50_Q9LJH8 Cluster: RNA binding protein nucleolysin; oligou... 44 0.003
UniRef50_Q93194 Cluster: Putative uncharacterized protein; n=3; ... 41 0.016
UniRef50_A5BCT2 Cluster: Putative uncharacterized protein; n=1; ... 40 0.050
UniRef50_Q01JG9 Cluster: H0818E04.14 protein; n=7; Oryza sativa|... 39 0.066
UniRef50_A3A860 Cluster: Putative uncharacterized protein; n=1; ... 39 0.088
UniRef50_A2VEU7 Cluster: IP18392p; n=2; Drosophila melanogaster|... 37 0.27
UniRef50_A7SW98 Cluster: Predicted protein; n=1; Nematostella ve... 36 0.62
UniRef50_Q2U250 Cluster: RRM domain; n=13; Pezizomycotina|Rep: R... 36 0.82
UniRef50_Q7EZ58 Cluster: RNA Binding Protein-like; n=3; Oryza sa... 35 1.1
UniRef50_A2CEQ6 Cluster: Novel protein (Possible ortholog of hum... 35 1.4
UniRef50_Q5A4G6 Cluster: Putative uncharacterized protein PUB1; ... 35 1.4
UniRef50_A5E7B5 Cluster: Putative uncharacterized protein; n=1; ... 35 1.4
UniRef50_Q9NX07 Cluster: tRNA selenocysteine-associated protein ... 35 1.4
UniRef50_Q5TRR6 Cluster: ENSANGP00000026017; n=1; Anopheles gamb... 34 1.9
UniRef50_Q1DXH0 Cluster: Polyadenylate-binding protein, cytoplas... 34 1.9
UniRef50_Q5AH44 Cluster: Putative uncharacterized protein WHI4; ... 34 2.5
UniRef50_A6LSW8 Cluster: Cobalamin biosynthesis protein CobD; n=... 33 3.3
UniRef50_A5BUJ6 Cluster: Putative uncharacterized protein; n=1; ... 33 3.3
UniRef50_UPI000065F029 Cluster: RNA-binding protein 7 (RNA-bindi... 33 4.4
UniRef50_A2E9Q7 Cluster: Putative uncharacterized protein; n=1; ... 33 4.4
UniRef50_Q6BKS6 Cluster: Similar to CA1728|CaWHI3 Candida albica... 33 4.4
UniRef50_A5DAF6 Cluster: Putative uncharacterized protein; n=1; ... 33 4.4
UniRef50_Q9LJL7 Cluster: DNA/RNA binding protein-like; n=13; cor... 33 5.8
UniRef50_A7P705 Cluster: Chromosome chr9 scaffold_7, whole genom... 33 5.8
UniRef50_A7TPM5 Cluster: Putative uncharacterized protein; n=1; ... 33 5.8
UniRef50_A3LWB6 Cluster: Protein involved in regulation of cell ... 33 5.8
UniRef50_Q7ZWA5 Cluster: Zgc:77304; n=4; Danio rerio|Rep: Zgc:77... 32 7.6
UniRef50_Q4S3R1 Cluster: Chromosome 17 SCAF14747, whole genome s... 32 7.6
UniRef50_Q5P177 Cluster: Putative nucleotidyltransferase; n=3; R... 32 7.6
UniRef50_O60176 Cluster: Uncharacterized RNA-binding protein C23... 32 7.6
>UniRef50_UPI0000D567E5 Cluster: PREDICTED: similar to CG5422-PB,
isoform B; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG5422-PB, isoform B - Tribolium castaneum
Length = 364
Score = 89.4 bits (212), Expect = 5e-17
Identities = 39/42 (92%), Positives = 39/42 (92%)
Frame = +1
Query: 382 LDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILR 507
LDKEMKVNWATSPGNQPK DTSNHHHIFVGDLSPEIET LR
Sbjct: 72 LDKEMKVNWATSPGNQPKQDTSNHHHIFVGDLSPEIETETLR 113
Score = 62.1 bits (144), Expect = 8e-09
Identities = 28/40 (70%), Positives = 29/40 (72%)
Frame = +2
Query: 257 QIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKR 376
QIG VKGCKIIREPGNDPYAF+EFT H MNKR
Sbjct: 30 QIGPVKGCKIIREPGNDPYAFVEFTNHQSASTALAAMNKR 69
Score = 55.6 bits (128), Expect = 7e-07
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +3
Query: 171 MGDESHPKTLYVGNLDPSVTEVFLCTLF 254
M DESHPKTLYVGNLDPSV+E LCTLF
Sbjct: 1 MSDESHPKTLYVGNLDPSVSEDLLCTLF 28
Score = 32.3 bits (70), Expect = 7.6
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 510 AFAPFGEISNCRI 548
AFAPFGEISNCRI
Sbjct: 115 AFAPFGEISNCRI 127
>UniRef50_Q8IMX4 Cluster: CG5422-PD, isoform D; n=14;
Endopterygota|Rep: CG5422-PD, isoform D - Drosophila
melanogaster (Fruit fly)
Length = 470
Score = 84.2 bits (199), Expect = 2e-15
Identities = 36/42 (85%), Positives = 39/42 (92%)
Frame = +1
Query: 382 LDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILR 507
L+KE+KVNWATSPGNQPKTD S+HHHIFVGDLSPEIET LR
Sbjct: 71 LEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLR 112
Score = 51.6 bits (118), Expect = 1e-05
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = +2
Query: 260 IGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKR 376
+G VK CKIIREPGNDPYAF+E++ + MNKR
Sbjct: 30 MGPVKSCKIIREPGNDPYAFIEYSNYQAATTALTAMNKR 68
Score = 41.1 bits (92), Expect = 0.016
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = +3
Query: 177 DESHPKTLYVGNLDPSVTEVFLCTLF 254
DES PKTLYVGNLD SV+E L LF
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALF 27
Score = 32.3 bits (70), Expect = 7.6
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 510 AFAPFGEISNCRI 548
AFAPFGEISNCRI
Sbjct: 114 AFAPFGEISNCRI 126
>UniRef50_Q01085 Cluster: Nucleolysin TIAR; n=67; Euteleostomi|Rep:
Nucleolysin TIAR - Homo sapiens (Human)
Length = 375
Score = 70.5 bits (165), Expect = 2e-11
Identities = 42/105 (40%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Frame = +1
Query: 196 LSTSVIWTRVSQKFSYVR-CLSNRRCKRLQDYTGARK*PVCISRVYVSHGGGHSAGRHEQ 372
LS V + Q FS + C S CK + ++T P C Y +
Sbjct: 16 LSRDVTEVLILQLFSQIGPCKS---CKMITEHTSND--PYCFVEFYEHRDAAAALAAMNG 70
Query: 373 AXVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILR 507
+L KE+KVNWAT+P +Q K DTSNH H+FVGDLSPEI T ++
Sbjct: 71 RKILGKEVKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIK 114
Score = 37.1 bits (82), Expect = 0.27
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +3
Query: 171 MGDESHPKTLYVGNLDPSVTEVFLCTLF 254
M D+ P+TLYVGNL VTEV + LF
Sbjct: 2 MEDDGQPRTLYVGNLSRDVTEVLILQLF 29
>UniRef50_A7SUY1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 235
Score = 62.1 bits (144), Expect = 8e-09
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +1
Query: 265 RCKRLQDYTGARK*PVCISRVYVSHGGGHSAG-RHEQAXVLDKEMKVNWATSPGNQPKTD 441
RCK + + K P C + +H A R +Q V+DK++KVNWAT+ + D
Sbjct: 26 RCKMINSVS--YKGPYCFVE-FETHADAQEAKFRMDQRTVMDKKLKVNWATNHPGMKRGD 82
Query: 442 TSNHHHIFVGDLSPEIETNILR 507
T+NH HIFVGDL+ ++ +LR
Sbjct: 83 TNNHFHIFVGDLAENVDNALLR 104
>UniRef50_Q95QV8 Cluster: Putative uncharacterized protein; n=6;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 408
Score = 59.7 bits (138), Expect = 4e-08
Identities = 26/44 (59%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Frame = +1
Query: 379 VLDKEMKVNWATSPGNQP-KTDTSNHHHIFVGDLSPEIETNILR 507
+LD+EMKVNWA PG Q K DT+ H H+FVGDLS E++ LR
Sbjct: 109 LLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLR 152
Score = 40.3 bits (90), Expect = 0.029
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = +2
Query: 257 QIGDVKGCKIIREPGNDPYAFLEFTCHXXXXXXXXXMNKR 376
QIG V K+I + NDPYAF+EF+ H MNKR
Sbjct: 68 QIGSVTKTKVIFDGSNDPYAFVEFSDHGQASQALQTMNKR 107
Score = 38.7 bits (86), Expect = 0.088
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +3
Query: 168 NMGDESHPKTLYVGNLDPSVTEVFLCTLF 254
N DE P+TLYVGNLD +VTE F+ TLF
Sbjct: 40 NGSDE--PRTLYVGNLDSTVTEDFIATLF 66
>UniRef50_Q5KHU8 Cluster: MRNA catabolism, nonsense-mediated-related
protein, putative; n=1; Filobasidiella neoformans|Rep:
MRNA catabolism, nonsense-mediated-related protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 434
Score = 57.2 bits (132), Expect = 2e-07
Identities = 23/42 (54%), Positives = 32/42 (76%)
Frame = +1
Query: 379 VLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNIL 504
+ D E++VNWA GNQ K DT +H+H+FVGDLSPE+ ++L
Sbjct: 89 IFDAEIRVNWAYQ-GNQNKEDTQHHYHVFVGDLSPEVNDDVL 129
>UniRef50_P31483 Cluster: Nucleolysin TIA-1 isoform p40 (RNA-binding
protein TIA-1) (p40-TIA-1) [Contains: Nucleolysin TIA-1
isoform p15 (p15-TIA-1)]; n=23; Euteleostomi|Rep:
Nucleolysin TIA-1 isoform p40 (RNA-binding protein
TIA-1) (p40-TIA-1) [Contains: Nucleolysin TIA-1 isoform
p15 (p15-TIA-1)] - Homo sapiens (Human)
Length = 386
Score = 56.4 bits (130), Expect = 4e-07
Identities = 37/114 (32%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Frame = +1
Query: 196 LSTSVIWTRVSQKFSYVRCLSNRRCKRLQDYTGARK*PVCISRVYVSHGGGHSAGRHEQA 375
LS V + Q FS + N CK + D G P C + +
Sbjct: 14 LSRDVTEALILQLFSQIGPCKN--CKMIMDTAGND--PYCFVEFHEHRHAAAALAAMNGR 69
Query: 376 XVLDKEMKVNWATSPGNQPKTDTS----------NHHHIFVGDLSPEIETNILR 507
++ KE+KVNWAT+P +Q K +S NH H+FVGDLSP+I T ++
Sbjct: 70 KIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQNHFHVFVGDLSPQITTEDIK 123
Score = 33.1 bits (72), Expect = 4.4
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3
Query: 177 DESHPKTLYVGNLDPSVTEVFLCTLF 254
++ PKTLYVGNL VTE + LF
Sbjct: 2 EDEMPKTLYVGNLSRDVTEALILQLF 27
>UniRef50_Q59G98 Cluster: TIA1 protein variant; n=5;
Euteleostomi|Rep: TIA1 protein variant - Homo sapiens
(Human)
Length = 464
Score = 55.6 bits (128), Expect = 7e-07
Identities = 37/114 (32%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Frame = +1
Query: 196 LSTSVIWTRVSQKFSYVRCLSNRRCKRLQDYTGARK*PVCISRVYVSHGGGHSAGRHEQA 375
LS V + Q FS + N CK + D G P C + +
Sbjct: 52 LSRDVTEALILQLFSQIGPCKN--CKMIMDTAGND--PYCFVEFHEHRHAAAALAAMNGR 107
Query: 376 XVLDKEMKVNWATSPGNQPKTDTS----------NHHHIFVGDLSPEIETNILR 507
++ KE+KVNWAT+P +Q K +S +H H+FVGDLSPEI T ++
Sbjct: 108 KIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIK 161
Score = 33.9 bits (74), Expect = 2.5
Identities = 18/30 (60%), Positives = 19/30 (63%)
Frame = +3
Query: 165 ANMGDESHPKTLYVGNLDPSVTEVFLCTLF 254
A M DE PKTLYVGNL VTE + LF
Sbjct: 37 AAMEDEM-PKTLYVGNLSRDVTEALILQLF 65
>UniRef50_A2QQZ9 Cluster: Similarity to oligouridylate binding
protein ubp1; n=18; Pezizomycotina|Rep: Similarity to
oligouridylate binding protein ubp1 - Aspergillus niger
Length = 497
Score = 50.0 bits (114), Expect = 4e-05
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = +1
Query: 391 EMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNIL 504
E++VNWA + K DTSNH HIFVGDLS E+ +L
Sbjct: 163 EIRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVL 200
>UniRef50_Q9U2F5 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 434
Score = 48.8 bits (111), Expect = 8e-05
Identities = 24/52 (46%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Frame = +1
Query: 364 HEQAXVLDKEMKVNWATSPG----NQPKTDTSNHHHIFVGDLSPEIETNILR 507
H +L+KEM V WA P N+ K +TS H H+FVGDL EI++ LR
Sbjct: 98 HNGRELLEKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLR 149
Score = 37.1 bits (82), Expect = 0.27
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +3
Query: 189 PKTLYVGNLDPSVTEVFLCTLF 254
P+TL+V NLDP++T+ FL TLF
Sbjct: 39 PRTLFVANLDPAITDEFLATLF 60
Score = 35.1 bits (77), Expect = 1.1
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +2
Query: 257 QIGDVKGCKIIREPGNDPYAFLEFTCH 337
QIG V KII E NDPYAF+EF+ H
Sbjct: 62 QIGAVMKAKIIFEGLNDPYAFVEFSDH 88
>UniRef50_UPI0000E47D9B Cluster: PREDICTED: similar to TIA1
cytotoxic granule-associated RNA binding protein-like 1;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to TIA1 cytotoxic granule-associated RNA binding
protein-like 1 - Strongylocentrotus purpuratus
Length = 620
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/38 (55%), Positives = 30/38 (78%)
Frame = +1
Query: 394 MKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILR 507
+KVNWAT+ G+ + DT++HHH+FVGDL E++T LR
Sbjct: 287 IKVNWATTQGS--RKDTTHHHHVFVGDLVQEMKTAELR 322
Score = 34.3 bits (75), Expect = 1.9
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +3
Query: 177 DESHPKTLYVGNLDPSVTEVFLCTLFVK 260
+++ P+TLYVGNLD VTE + LF++
Sbjct: 20 EDAQPRTLYVGNLDRRVTEELVFQLFLQ 47
Score = 34.3 bits (75), Expect = 1.9
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +3
Query: 177 DESHPKTLYVGNLDPSVTEVFLCTLFVK 260
+++ P+TLYVGNLD VTE + LF++
Sbjct: 65 EDAQPRTLYVGNLDRRVTEELVFQLFLQ 92
>UniRef50_Q3ECQ4 Cluster: Uncharacterized protein At1g54080.2; n=11;
Magnoliophyta|Rep: Uncharacterized protein At1g54080.2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 430
Score = 46.0 bits (104), Expect = 6e-04
Identities = 23/44 (52%), Positives = 30/44 (68%)
Frame = +1
Query: 358 GRHEQAXVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEI 489
GRH + + MKVNWA + G + DTS+H +IFVGDLSPE+
Sbjct: 122 GRH----IFGQPMKVNWAYATGQ--REDTSSHFNIFVGDLSPEV 159
>UniRef50_UPI0000D578A0 Cluster: PREDICTED: similar to CG12870-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG12870-PA - Tribolium castaneum
Length = 423
Score = 44.8 bits (101), Expect = 0.001
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +1
Query: 382 LDKEMKVNWATSPGNQPKTDT-SNHHHIFVGDLSPEIETNILR 507
L+ K+ N P ++ + HHHIFVGDLSPEIET LR
Sbjct: 26 LETTTKLTTVNQNSNTPSSNNKAEHHHIFVGDLSPEIETQTLR 68
>UniRef50_Q9LNS1 Cluster: F1L3.2; n=1; Arabidopsis thaliana|Rep:
F1L3.2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 575
Score = 44.0 bits (99), Expect = 0.002
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +1
Query: 358 GRHEQAXVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNIL 504
GRH + + +KVNWA + G + DTS+H +IFVGDLSPE+ +L
Sbjct: 206 GRH----LFGQPIKVNWAYASGQ--REDTSSHFNIFVGDLSPEVTDAML 248
>UniRef50_Q9LJH8 Cluster: RNA binding protein nucleolysin;
oligouridylate binding protein; n=12; Magnoliophyta|Rep:
RNA binding protein nucleolysin; oligouridylate binding
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 43.6 bits (98), Expect = 0.003
Identities = 22/44 (50%), Positives = 30/44 (68%)
Frame = +1
Query: 358 GRHEQAXVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEI 489
GRH + + +KVNWA + G + DTS+H +IFVGDLSPE+
Sbjct: 118 GRH----LFGQPIKVNWAYATGQ--REDTSSHFNIFVGDLSPEV 155
>UniRef50_Q93194 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 360
Score = 41.1 bits (92), Expect = 0.016
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +1
Query: 373 AXVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILR 507
A VL + ++ A+ P + + DTS H H+FVGDLS ++ +L+
Sbjct: 108 AIVLQESAVLHSASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLK 152
>UniRef50_A5BCT2 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 420
Score = 39.5 bits (88), Expect = 0.050
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = -2
Query: 428 WLPGLVAQLTFISLSRTXACSWRPALWPPPCDT*TREMHTGHFL 297
WLP +VA++ F+++S T +W P+ W P C +E+ +FL
Sbjct: 186 WLPTMVARIIFLTVSMTKNGTWIPSDWSPICYQALKEVSEDYFL 229
>UniRef50_Q01JG9 Cluster: H0818E04.14 protein; n=7; Oryza
sativa|Rep: H0818E04.14 protein - Oryza sativa (Rice)
Length = 426
Score = 39.1 bits (87), Expect = 0.066
Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Frame = +1
Query: 328 YVSHGGGHSAGRHEQAXVL---DKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETN 498
+ SHG A ++ V+ D+ K+NWA+ + +++ ++ + IFVGDL+ ++
Sbjct: 152 FYSHGSAEKALQNFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDYSIFVGDLAADVTDE 211
Query: 499 ILRGPSLHLVRYRTV 543
+L L +YR+V
Sbjct: 212 MLM--ELFANKYRSV 224
>UniRef50_A3A860 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 359
Score = 38.7 bits (86), Expect = 0.088
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +1
Query: 328 YVSHGGGHSAGRHEQAXVL---DKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETN 498
+ SH A ++ V+ D+ K+NWA+ + + + ++ H IFVGDL+ ++
Sbjct: 93 FFSHASAEKALQNFSGHVMPNTDRAFKLNWASYSMGEKRAELASDHSIFVGDLAVDVTDE 152
Query: 499 ILRGPSLHLVRYRTV 543
+L L +YR+V
Sbjct: 153 MLM--DLFAKKYRSV 165
>UniRef50_A2VEU7 Cluster: IP18392p; n=2; Drosophila
melanogaster|Rep: IP18392p - Drosophila melanogaster
(Fruit fly)
Length = 166
Score = 37.1 bits (82), Expect = 0.27
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = +1
Query: 316 ISRVYVSHGGGHSAGRHEQAXVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIET 495
++ ++ H G + +Q + ++ + GN K + HIFVGDLS EIET
Sbjct: 53 VTAAHLQHNGQQQHSQQQQQQQMSQQQQQQQQQLVGNNSKPE---QFHIFVGDLSAEIET 109
Query: 496 NILRGP 513
R P
Sbjct: 110 QQRRHP 115
>UniRef50_A7SW98 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 534
Score = 35.9 bits (79), Expect = 0.62
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 388 KEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILR 507
K K+NWAT + T IFVGDL+P++ ++L+
Sbjct: 76 KRFKLNWATYAYGKESTHQGPEFSIFVGDLTPDVNDHMLQ 115
>UniRef50_Q2U250 Cluster: RRM domain; n=13; Pezizomycotina|Rep: RRM
domain - Aspergillus oryzae
Length = 488
Score = 35.5 bits (78), Expect = 0.82
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +1
Query: 397 KVNWATSPG--NQPKTDTSNHHHIFVGDLSPEIETNIL 504
K+NWAT G ++ + D + IFVGDL PE+ +L
Sbjct: 137 KLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVL 174
>UniRef50_Q7EZ58 Cluster: RNA Binding Protein-like; n=3; Oryza
sativa|Rep: RNA Binding Protein-like - Oryza sativa
subsp. japonica (Rice)
Length = 206
Score = 35.1 bits (77), Expect = 1.1
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 382 LDKEMKVNWATS-PGNQPKTDTSNHHHIFVGDLSPEIETNIL 504
+D+ K+NWA+S G + D H IFVGDL+ ++ ++L
Sbjct: 83 VDQLFKLNWASSGAGERRAADDGPEHTIFVGDLASDVTDSML 124
>UniRef50_A2CEQ6 Cluster: Novel protein (Possible ortholog of human
tRNA selenocysteine associated protein (SECP43)); n=1;
Mus musculus|Rep: Novel protein (Possible ortholog of
human tRNA selenocysteine associated protein (SECP43)) -
Mus musculus (Mouse)
Length = 247
Score = 34.7 bits (76), Expect = 1.4
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +1
Query: 388 KEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNIL 504
K K+N+AT G QP D S + +FVGDL+P+++ +L
Sbjct: 77 KRFKLNYATY-GKQP--DNSPEYSLFVGDLTPDVDDGML 112
>UniRef50_Q5A4G6 Cluster: Putative uncharacterized protein PUB1;
n=1; Candida albicans|Rep: Putative uncharacterized
protein PUB1 - Candida albicans (Yeast)
Length = 510
Score = 34.7 bits (76), Expect = 1.4
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +1
Query: 385 DKEMKVNWA---TSPGNQPKTDTSNHHHIFVGDLSPEIETNILR 507
D E+KVNWA + P +IFVGDLSPE+ LR
Sbjct: 147 DVEIKVNWAFQSAAIAGNPNNTEEPLFNIFVGDLSPEVNDEGLR 190
>UniRef50_A5E7B5 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 817
Score = 34.7 bits (76), Expect = 1.4
Identities = 18/31 (58%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +3
Query: 165 ANMGDESHP-KTLYVGNLDPSVTEVFLCTLF 254
AN D++ P TLYVGNL P TE L TLF
Sbjct: 630 ANPADQNPPCNTLYVGNLPPDATETELRTLF 660
>UniRef50_Q9NX07 Cluster: tRNA selenocysteine-associated protein 1;
n=20; Euteleostomi|Rep: tRNA selenocysteine-associated
protein 1 - Homo sapiens (Human)
Length = 287
Score = 34.7 bits (76), Expect = 1.4
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +1
Query: 388 KEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNIL 504
K K+N+AT G QP D S + +FVGDL+P+++ +L
Sbjct: 77 KRFKLNYATY-GKQP--DNSPEYSLFVGDLTPDVDDGML 112
>UniRef50_Q5TRR6 Cluster: ENSANGP00000026017; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000026017 - Anopheles gambiae
str. PEST
Length = 907
Score = 34.3 bits (75), Expect = 1.9
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 212 FGPECHRSFPMYVVCQIGDVKGCKIIREPGNDPY 313
F P+C +SFP++ G V CK + G +PY
Sbjct: 10 FKPDCFKSFPLHRAAASGSVTECKQLLADGTNPY 43
>UniRef50_Q1DXH0 Cluster: Polyadenylate-binding protein, cytoplasmic
and nuclear (Poly(A)- binding protein); n=11;
Pezizomycotina|Rep: Polyadenylate-binding protein,
cytoplasmic and nuclear (Poly(A)- binding protein) -
Coccidioides immitis
Length = 768
Score = 34.3 bits (75), Expect = 1.9
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +3
Query: 180 ESHPKTLYVGNLDPSVTEVFLCTLF 254
+ H +LYVG LDPSVTE L LF
Sbjct: 51 QPHSASLYVGELDPSVTEAMLFELF 75
>UniRef50_Q5AH44 Cluster: Putative uncharacterized protein WHI4;
n=1; Candida albicans|Rep: Putative uncharacterized
protein WHI4 - Candida albicans (Yeast)
Length = 704
Score = 33.9 bits (74), Expect = 2.5
Identities = 18/31 (58%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +3
Query: 165 ANMGDESHP-KTLYVGNLDPSVTEVFLCTLF 254
AN D++ P TLYVGNL P TE L TLF
Sbjct: 536 ANPADQNPPCNTLYVGNLPPDATESELRTLF 566
>UniRef50_A6LSW8 Cluster: Cobalamin biosynthesis protein CobD; n=1;
Clostridium beijerinckii NCIMB 8052|Rep: Cobalamin
biosynthesis protein CobD - Clostridium beijerinckii
NCIMB 8052
Length = 315
Score = 33.5 bits (73), Expect = 3.3
Identities = 25/95 (26%), Positives = 38/95 (40%)
Frame = -3
Query: 409 PN*PSFPCRGXSLVHGGQRCGRRRVTRKLEKCIRVISWLPYNLATFYIAYLTNNVHRKTS 230
PN P P RG V RR+ RK K +I W+ F IA+ N+ R+ +
Sbjct: 17 PNNPFHPVRGIGYVAKKLEAMFRRILRKHLKAAGLIVWILTVSIIFAIAFAIVNLSREFN 76
Query: 229 VTLGSKLPT*RVFGWLSSPILAYRNLSITFLTSMN 125
+ G L ++ +SS L + +N
Sbjct: 77 IYFGIILEGILIYFCISSKALVVEGYKVVKFLLIN 111
>UniRef50_A5BUJ6 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 312
Score = 33.5 bits (73), Expect = 3.3
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 177 DESHPKTLYVGNLDPSVTEVFLCTLFVK 260
+ + T YVGNLDP VTE L LFV+
Sbjct: 20 ERNQDATAYVGNLDPQVTEELLWELFVQ 47
>UniRef50_UPI000065F029 Cluster: RNA-binding protein 7 (RNA-binding
motif protein 7).; n=1; Takifugu rubripes|Rep:
RNA-binding protein 7 (RNA-binding motif protein 7). -
Takifugu rubripes
Length = 325
Score = 33.1 bits (72), Expect = 4.4
Identities = 16/32 (50%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +3
Query: 168 NMG-DESHPKTLYVGNLDPSVTEVFLCTLFVK 260
NMG +E +TL++ NLDP VTE L LF++
Sbjct: 48 NMGIEEETDRTLFIRNLDPRVTEELLFELFLQ 79
>UniRef50_A2E9Q7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 101
Score = 33.1 bits (72), Expect = 4.4
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -3
Query: 370 VHGGQRCGRRRVTRKLEKCIRVISWLPYNLATFYIAYLTNNVH 242
+H RC ++ +T L + V+ WL N ++ YL NN++
Sbjct: 56 LHYAARCDKKEMTEFLISLLVVVLWLKINNVYYHFYYLFNNIY 98
>UniRef50_Q6BKS6 Cluster: Similar to CA1728|CaWHI3 Candida albicans
CaWHI3 Putative RNA binding protein; n=1; Debaryomyces
hansenii|Rep: Similar to CA1728|CaWHI3 Candida albicans
CaWHI3 Putative RNA binding protein - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 529
Score = 33.1 bits (72), Expect = 4.4
Identities = 17/31 (54%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +3
Query: 165 ANMGDESHP-KTLYVGNLDPSVTEVFLCTLF 254
AN D++ P TLYVGNL P TE+ L LF
Sbjct: 383 ANPADQNPPCNTLYVGNLPPDATELELRALF 413
>UniRef50_A5DAF6 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 589
Score = 33.1 bits (72), Expect = 4.4
Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +3
Query: 165 ANMGDESHP-KTLYVGNLDPSVTEVFLCTLFV 257
AN D++ P TLYVGNL P TE L LF+
Sbjct: 446 ANPADQNPPCNTLYVGNLPPDATEAELRALFL 477
>UniRef50_Q9LJL7 Cluster: DNA/RNA binding protein-like; n=13; core
eudicotyledons|Rep: DNA/RNA binding protein-like -
Arabidopsis thaliana (Mouse-ear cress)
Length = 489
Score = 32.7 bits (71), Expect = 5.8
Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 385 DKEMKVNWAT-SPGNQPKTDTSNHHHIFVGDLSPEIETNIL 504
D+ ++NWA+ S G + + +FVGDLSP++ T++L
Sbjct: 178 DQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDV-TDVL 217
>UniRef50_A7P705 Cluster: Chromosome chr9 scaffold_7, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr9 scaffold_7, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 476
Score = 32.7 bits (71), Expect = 5.8
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +3
Query: 174 GDESHPKTLYVGNLDPSVTEVFLCTLF 254
G E H LYVG+LDP V+EV L +F
Sbjct: 23 GFELHKAALYVGDLDPEVSEVELVDVF 49
>UniRef50_A7TPM5 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 794
Score = 32.7 bits (71), Expect = 5.8
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 257 QIGDVKGCKIIREPGNDPYAFLEFT 331
Q G++ K++R+P N PYAF+++T
Sbjct: 131 QYGNLARVKVLRDPANRPYAFVQYT 155
>UniRef50_A3LWB6 Cluster: Protein involved in regulation of cell
size putative RNA binding protein; n=1; Pichia
stipitis|Rep: Protein involved in regulation of cell
size putative RNA binding protein - Pichia stipitis
(Yeast)
Length = 732
Score = 32.7 bits (71), Expect = 5.8
Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +3
Query: 165 ANMGDESHP-KTLYVGNLDPSVTEVFLCTLF 254
AN D++ P TLYVGNL P TE L LF
Sbjct: 577 ANPADQNPPCNTLYVGNLPPDATEAELRALF 607
>UniRef50_Q7ZWA5 Cluster: Zgc:77304; n=4; Danio rerio|Rep: Zgc:77304
- Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 252
Score = 32.3 bits (70), Expect = 7.6
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +3
Query: 171 MGDESHPKTLYVGNLDPSVTEVFLCTLFVK 260
+ DE+ +TL+VGNLDP VTE + LF++
Sbjct: 3 IADEAD-RTLFVGNLDPQVTEEVIFELFLQ 31
>UniRef50_Q4S3R1 Cluster: Chromosome 17 SCAF14747, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 17 SCAF14747, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 89
Score = 32.3 bits (70), Expect = 7.6
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +1
Query: 448 NHHHIFVGDLSPEIETNILR 507
+H H+FVGDLSP+I T +R
Sbjct: 60 DHFHVFVGDLSPDITTEDIR 79
>UniRef50_Q5P177 Cluster: Putative nucleotidyltransferase; n=3;
Rhodocyclaceae|Rep: Putative nucleotidyltransferase -
Azoarcus sp. (strain EbN1) (Aromatoleum aromaticum
(strain EbN1))
Length = 632
Score = 32.3 bits (70), Expect = 7.6
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Frame = +1
Query: 148 STDYDKLIWATKATRKLSTSVIWTRVS--QKFSYVRCLSNRRCKRLQDYTGARK*PVCIS 321
+ D D L A++ R+L+ ++I V Q ++ L++ +R+ D AR I
Sbjct: 303 AVDVDGLQRASRDIRQLALNLIAQGVGAEQLTQFISALNDALTRRIIDLAAARHDIHGID 362
Query: 322 RVYVSHGGGHSAGRHEQAXVLDKEMKVNWATSPG 423
+++ G S GRHEQ D++ V + + PG
Sbjct: 363 YAWLAFG---SEGRHEQTLSSDQDNGVIFVSPPG 393
>UniRef50_O60176 Cluster: Uncharacterized RNA-binding protein
C23E6.01c; n=3; Schizosaccharomyces pombe|Rep:
Uncharacterized RNA-binding protein C23E6.01c -
Schizosaccharomyces pombe (Fission yeast)
Length = 473
Score = 32.3 bits (70), Expect = 7.6
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +1
Query: 397 KVNWATSPGNQPKT-DTSNHHHIFVGDLSPEI 489
K+NWA+ G + K+ ++ + IFVGDLSP +
Sbjct: 166 KLNWASGGGLREKSISKASEYSIFVGDLSPNV 197
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 522,127,013
Number of Sequences: 1657284
Number of extensions: 10055485
Number of successful extensions: 23178
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 22409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23157
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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