Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20293
         (772 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089566-1|AAL90304.1|  191|Drosophila melanogaster RE03721p pro...    53   5e-07
AE014298-532|AAF45875.1|  191|Drosophila melanogaster CG14270-PA...    53   5e-07

>AY089566-1|AAL90304.1|  191|Drosophila melanogaster RE03721p
           protein.
          Length = 191

 Score = 52.8 bits (121), Expect = 5e-07
 Identities = 25/77 (32%), Positives = 36/77 (46%)
 Frame = +3

Query: 447 LAIFRHLLQSRSYSL*KLGNLSVMYTSELSNSCDLYRAHCTYTKPTYFSFPSRIVDIGFM 626
           L      +  +   L  LG  ++++          Y A C YT    F+F  RI+D+GF 
Sbjct: 114 LLTLERAINQKKLRLLSLGICTILWVDLYDEDDCTYPAICEYTNVGVFNFHERIIDVGFW 173

Query: 627 GKWWNLFIKSTNYDVNY 677
            ++W L  K  NYDVNY
Sbjct: 174 NQYWRLKWKMRNYDVNY 190



 Score = 46.0 bits (104), Expect = 6e-05
 Identities = 16/47 (34%), Positives = 29/47 (61%)
 Frame = +2

Query: 113 KMLRSIYKVSGTVKNISTKVKFPEKFKGTIIEKWADYWKNLFIDYRQ 253
           + LR   +++   + ++ +++ PE+FKGT +EKW  YW  L  DY +
Sbjct: 2   QFLRVGGRITALRQRLTDRIQMPERFKGTFVEKWVQYWNGLVRDYTE 48



 Score = 41.9 bits (94), Expect = 0.001
 Identities = 24/73 (32%), Positives = 37/73 (50%)
 Frame = +1

Query: 289 PMKAMKWTTGIITFYLLSRNNPTECDFKDNLKIINNEVGLVSEECLNPKAVEHLRFLDTC 468
           P KA+ + TG++  Y  +  NP E  F   L+   N +  V  E  NP + ++L  L+  
Sbjct: 61  PKKALLYGTGMLFMYQANLKNPGEEAFMTLLRGATNRMITVPVELQNPVSADYLLTLERA 120

Query: 469 YNQEVIHYRSLGI 507
            NQ+ +   SLGI
Sbjct: 121 INQKKLRLLSLGI 133


>AE014298-532|AAF45875.1|  191|Drosophila melanogaster CG14270-PA
           protein.
          Length = 191

 Score = 52.8 bits (121), Expect = 5e-07
 Identities = 25/77 (32%), Positives = 36/77 (46%)
 Frame = +3

Query: 447 LAIFRHLLQSRSYSL*KLGNLSVMYTSELSNSCDLYRAHCTYTKPTYFSFPSRIVDIGFM 626
           L      +  +   L  LG  ++++          Y A C YT    F+F  RI+D+GF 
Sbjct: 114 LLTLERAINQKKLRLLSLGICTILWVDLYDEDDCTYPAICEYTNVGVFNFHERIIDVGFW 173

Query: 627 GKWWNLFIKSTNYDVNY 677
            ++W L  K  NYDVNY
Sbjct: 174 NQYWRLKWKMRNYDVNY 190



 Score = 46.0 bits (104), Expect = 6e-05
 Identities = 16/47 (34%), Positives = 29/47 (61%)
 Frame = +2

Query: 113 KMLRSIYKVSGTVKNISTKVKFPEKFKGTIIEKWADYWKNLFIDYRQ 253
           + LR   +++   + ++ +++ PE+FKGT +EKW  YW  L  DY +
Sbjct: 2   QFLRVGGRITALRQRLTDRIQMPERFKGTFVEKWVQYWNGLVRDYTE 48



 Score = 41.9 bits (94), Expect = 0.001
 Identities = 24/73 (32%), Positives = 37/73 (50%)
 Frame = +1

Query: 289 PMKAMKWTTGIITFYLLSRNNPTECDFKDNLKIINNEVGLVSEECLNPKAVEHLRFLDTC 468
           P KA+ + TG++  Y  +  NP E  F   L+   N +  V  E  NP + ++L  L+  
Sbjct: 61  PKKALLYGTGMLFMYQANLKNPGEEAFMTLLRGATNRMITVPVELQNPVSADYLLTLERA 120

Query: 469 YNQEVIHYRSLGI 507
            NQ+ +   SLGI
Sbjct: 121 INQKKLRLLSLGI 133


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,294,788
Number of Sequences: 53049
Number of extensions: 766713
Number of successful extensions: 1723
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1723
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)