Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20291
(669 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 190 9e-49
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 182 2e-46
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 155 2e-38
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 132 3e-31
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 95 5e-20
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 3e-12
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 53 2e-07
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 6e-04
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.85
SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_17136| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 4.5
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_55129| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_50059| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_42630| Best HMM Match : Ets (HMM E-Value=0) 28 7.9
SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 190 bits (463), Expect = 9e-49
Identities = 111/201 (55%), Positives = 135/201 (67%), Gaps = 6/201 (2%)
Frame = +2
Query: 74 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 254 RTPTTQYSMPNVSSDVSSKMLLCKPT*STGLSR--LSVMEANLRSR*HIRVK--TKPFSP 421
P + ++ + + K P + ++ V+ R + + K K F P
Sbjct: 61 MNP--ENTVFDAKRLIGRK--FDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFP 116
Query: 422 RKSVPWCLRK*RKLPK-LISAKLCIMQLSRSAYFNDSQRQPTKDAGTISGLNVLRIINEP 598
+ L K ++ + + AK+ ++ AYF+DSQRQ TKDAGTI+GLNVLRIINEP
Sbjct: 117 EEISSMVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKDAGTIAGLNVLRIINEP 176
Query: 599 TAAAIAYGLDKK-GTENEMYL 658
TAAAIAYGLDKK G E + +
Sbjct: 177 TAAAIAYGLDKKVGVERNVLI 197
Score = 135 bits (326), Expect = 4e-32
Identities = 60/85 (70%), Positives = 71/85 (83%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSS 435
NP NT+FDAKRLIGRKF+D V DM HWPF V+ +G +PKI+V +KGE K+FFPEE+SS
Sbjct: 62 NPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISS 121
Query: 436 MVLTKMKETAEAYLGKTVHNAVITV 510
MVLTKMKETAEAYLG V +AV+TV
Sbjct: 122 MVLTKMKETAEAYLGAKVTDAVVTV 146
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 182 bits (444), Expect = 2e-46
Identities = 103/202 (50%), Positives = 131/202 (64%), Gaps = 5/202 (2%)
Frame = +2
Query: 74 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 254 RTPTTQYSMPNVSSDVSSKMLLCKPT*STGLSRLSVMEANLRSR*HIRVK--TKPFSPRK 427
P + ++ + + + L ++ N + + + K K F+ +
Sbjct: 61 LNP--ENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEE 118
Query: 428 SVPWCLRK*RKLPK-LISAKLCIMQLSRSAYFNDSQRQPTKDAGTISGLNVLRIINEPTA 604
L K ++ + + K+ ++ AYFNDSQRQ TKDAGTI+GLNVLR+INEPTA
Sbjct: 119 ISSMVLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATKDAGTIAGLNVLRVINEPTA 178
Query: 605 AAIAYGLDK--KGTENEMYLSL 664
AA+AYGLDK G +N + L
Sbjct: 179 AALAYGLDKSLSGEKNVLIFDL 200
Score = 136 bits (329), Expect = 2e-32
Identities = 63/85 (74%), Positives = 74/85 (87%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSS 435
NP NTIFDAKRLIGR+++DATVQ+DMK WPF+++SD KPKI+V YKGE KTF EE+SS
Sbjct: 62 NPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISS 121
Query: 436 MVLTKMKETAEAYLGKTVHNAVITV 510
MVL KMKETAEAYLG+ V +AVITV
Sbjct: 122 MVLGKMKETAEAYLGQKVTSAVITV 146
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 155 bits (377), Expect = 2e-38
Identities = 96/202 (47%), Positives = 126/202 (62%), Gaps = 11/202 (5%)
Frame = +2
Query: 92 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVARTPTT 268
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ P
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNP-- 761
Query: 269 QYSMPNVSSDVSSKMLLCKPT*STGLSR------LSVMEANLRSR*HIRVK--TKPFSPR 424
N D +K L+ + T + V++ N + ++VK K F+
Sbjct: 762 ----ENTVFD--AKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAE 815
Query: 425 KSVPWCLRK*RKLPK-LISAKLCIMQLSRSAYFNDSQRQPTKDAGTISGLNVLRIINEPT 601
+ L K ++ + + K+ ++ AYFND+QRQ TKDAG I+GL V+RIINEPT
Sbjct: 816 EISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGLTVMRIINEPT 875
Query: 602 AAAIAYGLDKK-GTENEMYLSL 664
AAAIAYG+DKK G +N + L
Sbjct: 876 AAAIAYGMDKKEGEKNILVFDL 897
Score = 114 bits (275), Expect = 5e-26
Identities = 54/85 (63%), Positives = 67/85 (78%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSS 435
NP NT+FDAKRLIGR ++D +VQ D+K +PF+VV KP ++V K E KTF EE+S+
Sbjct: 760 NPENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISA 819
Query: 436 MVLTKMKETAEAYLGKTVHNAVITV 510
MVLTKMKETAEAYLGK V +AV+TV
Sbjct: 820 MVLTKMKETAEAYLGKKVTHAVVTV 844
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 132 bits (318), Expect = 3e-31
Identities = 88/187 (47%), Positives = 110/187 (58%), Gaps = 26/187 (13%)
Frame = +2
Query: 74 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 254 RTPTT-----------QYSMPNVSSDV---SSKML--LCKPT*ST---GLSRLSVME--A 370
PT ++ P V D+ S +++ +P G ++ E
Sbjct: 61 MNPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVV 120
Query: 371 NLRSR*HIRVK----TKPFSPRKSVPWCLRK*RKLPK-LISAKLCIMQLSRSAYFNDSQR 535
N R ++V+ TK F + L K ++ + + K+ ++ AYFNDSQR
Sbjct: 121 NEAGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQR 180
Query: 536 QPTKDAG 556
Q TKDAG
Sbjct: 181 QATKDAG 187
Score = 112 bits (269), Expect = 3e-25
Identities = 63/110 (57%), Positives = 72/110 (65%), Gaps = 25/110 (22%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEV-- 429
NP NTIFDAKRLIGR+F+D V+ DMKHW FEVV++ G+PK+KV YKGE KTFF EEV
Sbjct: 62 NPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVN 121
Query: 430 -----------------------SSMVLTKMKETAEAYLGKTVHNAVITV 510
SSMVL KMKETAEAYLG V +AV+TV
Sbjct: 122 EAGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTV 171
Score = 82.6 bits (195), Expect = 3e-16
Identities = 41/50 (82%), Positives = 43/50 (86%), Gaps = 1/50 (2%)
Frame = +2
Query: 512 AYFNDSQRQPTKDAGTISGLNVLRIINEPTAAAIAYGLDKK-GTENEMYL 658
AYFNDSQRQ TKDAG ISGLNVLRIINEPTAAAIAYGLDKK G E + +
Sbjct: 241 AYFNDSQRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQERNVLI 290
Score = 44.4 bits (100), Expect = 9e-05
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = +1
Query: 424 EVSSMVLTKMKETAEAYLGKTVHNAVITV 510
++SSMVL KMKETAEAYLG V +AV+TV
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTV 239
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 95.1 bits (226), Expect = 5e-20
Identities = 65/200 (32%), Positives = 101/200 (50%), Gaps = 5/200 (2%)
Frame = +2
Query: 80 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 254 RTP-TTQYSMPNVSSDVSSKMLLCKPT*STGLSRLSVMEANLRSR*HIRVKTKPFSPRKS 430
P T Y +K L + + N + +P +
Sbjct: 90 INPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEI 149
Query: 431 VPWCLRK*RKL-PKLISAKLCIMQLSRSAYFNDSQRQPTKDAGTISGLNVLRIINEPTAA 607
+ ++K R + + ++ + +S A F+ QR T A +++G+ VLR+INEPTAA
Sbjct: 150 GGYVIKKLRTMAERNLTTTVTKAVMSVPAEFDIKQRNATVKAASLAGITVLRVINEPTAA 209
Query: 608 AIAYGLDKK-GTENEMYLSL 664
A+AYGL KK G N M + L
Sbjct: 210 ALAYGLHKKEGVANVMVVDL 229
Score = 56.4 bits (130), Expect = 2e-08
Identities = 33/86 (38%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSD-GGKPKIKVAYKGEDKTFFPEEVS 432
NP NTI+DAKR IG+ F + K + F V +D G V KG PEE+
Sbjct: 91 NPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIG 150
Query: 433 SMVLTKMKETAEAYLGKTVHNAVITV 510
V+ K++ AE L TV AV++V
Sbjct: 151 GYVIKKLRTMAERNLTTTVTKAVMSV 176
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 68.9 bits (161), Expect = 3e-12
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVS 432
N NTI KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVM 177
Query: 433 SMVLTKMKETAEAYLGKTVHNAVITV 510
+M+ T++K TAE L V + VI+V
Sbjct: 178 AMLFTRLKTTAEIALKTKVTDCVISV 203
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +2
Query: 92 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 247
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +2
Query: 401 KTKPFSPRKSVPWCLRK*RKLPKL-ISAKLCIMQLSRSAYFNDSQRQPTKDAGTISGLNV 577
K + FSP + + + + ++ + K+ +S +Y+ D QR+ DA +GLN
Sbjct: 167 KQEVFSPEQVMAMLFTRLKTTAEIALKTKVTDCVISVPSYYTDRQRRCMLDASATAGLNC 226
Query: 578 LRIINEPTAAAIAYGLDKK 634
LR++N+ TA ++AYG+ K+
Sbjct: 227 LRLMNDTTAVSLAYGIYKQ 245
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 52.8 bits (121), Expect = 2e-07
Identities = 35/64 (54%), Positives = 39/64 (60%), Gaps = 24/64 (37%)
Frame = +2
Query: 512 AYFNDSQRQPTKDAGTISGLN------------------------VLRIINEPTAAAIAY 619
A+FND+QRQ TKDAGTI+GL+ VLRIINEPTAAAIAY
Sbjct: 47 AHFNDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAY 106
Query: 620 GLDK 631
GLDK
Sbjct: 107 GLDK 110
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/44 (50%), Positives = 32/44 (72%)
Frame = +1
Query: 379 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVHNAVITV 510
I V GE ++F PE++S++VL ++K AEA+LG+ V AVITV
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITV 45
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 143 GKVEIIANDQGNRTTPSYVAFTDTERLI 226
G IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = +2
Query: 515 YFNDSQRQPTKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTENE 649
+FN ++R+ A + GLNVL+I+N TA A+ YGL ++ + N+
Sbjct: 115 FFNQAERRALLRAAELVGLNVLQIMNSNTAVALNYGLFQQKSFND 159
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 373 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVHNAVITV 510
P +K Y+ D TF PEE+ M+L + E + + + V+TV
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTV 112
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.85
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +2
Query: 152 EIIANDQGNRTTPSYVAFT-DTERL 223
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 61 LKIQNGKSTRSRN-RSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCR 237
L++ N + ++ + R GY L R C R + +R + H++L R +RC
Sbjct: 225 LRLVNTRDDKTHDKRPGYRKLSRVC-GGRRPNEPYERTARV-HTILSTETETRFCAKRCA 282
Query: 238 QEPGGENPNNTIFDA 282
G +P NT F+A
Sbjct: 283 GTASGMDPKNTPFNA 297
>SB_17136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 974
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 426 SQFHGAYENEGNCRSLSRQNCA*C-SYHGPRTSMTLKDNPQKM 551
S HG Y +GN + + N A C P + TL++ P+K+
Sbjct: 405 SMLHGKYVKDGNLEEVPKGNAAACRDNEDPISRATLRNPPRKV 447
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 20 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 106
HVC +V T K K ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -2
Query: 467 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSNLRPMR 288
S F+F ST + +S +KV+ SPL + + P+ G S C V NL
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNV--QNLSRCP 1165
Query: 287 RLASNIVL 264
++++ VL
Sbjct: 1166 KISNATVL 1173
>SB_55129| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 28.3 bits (60), Expect = 6.0
Identities = 23/69 (33%), Positives = 32/69 (46%)
Frame = -1
Query: 321 HSSIFELTSDETFGIEYCVVGVLATWFLAASPMRRSVSVNAT*DGVVLLPWSLAMISTFP 142
+S + L + T +EY +GVLATW R + V AT L W L +++T
Sbjct: 23 YSRLGVLATWSTGDLEYWRLGVLATWSTGDLEYSR-LGVLATWSTGDLEYWRLGVLAT-- 79
Query: 141 CWKTPTQEY 115
W T EY
Sbjct: 80 -WSTGDLEY 87
>SB_50059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +3
Query: 201 RSQTPSVSSEMPPRTRWREPQQHNIRCQTSHRT*VRRCYCAS 326
R+ P S+ PP RW+ P Q QT H R Y S
Sbjct: 37 RTAEPLSHSKRPPPRRWKAPLQRCRMSQTQHGYRQGRAYTFS 78
>SB_42630| Best HMM Match : Ets (HMM E-Value=0)
Length = 631
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +3
Query: 102 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 245
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 42 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 89
>SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 977
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +3
Query: 102 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 245
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 388 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 435
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,028,861
Number of Sequences: 59808
Number of extensions: 537400
Number of successful extensions: 1639
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1629
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1729817375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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