Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20291
(669 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 184 5e-47
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 184 7e-47
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 167 6e-42
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 167 6e-42
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 160 9e-40
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 153 8e-38
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 153 1e-37
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 153 1e-37
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 116 1e-26
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 114 5e-26
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 94 7e-20
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 94 7e-20
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 63 2e-10
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 62 3e-10
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 51 9e-07
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 48 8e-06
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 48 8e-06
AF022979-6|ABD94088.1| 94|Caenorhabditis elegans Hypothetical ... 31 0.56
U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter... 28 5.2
AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical ... 28 5.2
AF078792-4|AAN84813.1| 261|Caenorhabditis elegans Hypothetical ... 28 6.9
AF078792-3|AAC26945.2| 635|Caenorhabditis elegans Hypothetical ... 28 6.9
Z81136-5|CAB03460.2| 733|Caenorhabditis elegans Hypothetical pr... 27 9.1
AJ276590-1|CAB91651.1| 679|Caenorhabditis elegans LET-413 prote... 27 9.1
AF068716-10|AAC17752.2| 679|Caenorhabditis elegans Lethal prote... 27 9.1
AF068716-9|AAT81195.1| 699|Caenorhabditis elegans Lethal protei... 27 9.1
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 184 bits (448), Expect = 5e-47
Identities = 104/190 (54%), Positives = 123/190 (64%), Gaps = 2/190 (1%)
Frame = +2
Query: 74 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 254 RTP-TTQYSMPNVSSDVSSKMLLCKPT*STGLSRLSVMEANLRSR*HIRVKTKPFSPRKS 430
P T + + + +S A + + + + K F+P +
Sbjct: 61 MNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEI 120
Query: 431 VPWCLRK*RKLPK-LISAKLCIMQLSRSAYFNDSQRQPTKDAGTISGLNVLRIINEPTAA 607
L K ++ + + + ++ AYFNDSQRQ TKDAG I+GLNVLRIINEPTAA
Sbjct: 121 SSMVLLKMKETAEAFLGTTVKDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAA 180
Query: 608 AIAYGLDKKG 637
AIAYGLDKKG
Sbjct: 181 AIAYGLDKKG 190
Score = 140 bits (339), Expect = 8e-34
Identities = 79/142 (55%), Positives = 97/142 (68%), Gaps = 4/142 (2%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVS 432
NP+NT+FDAKRLIGRKF+D VQ+DMKHWPF+V+S +G KPK++V YKGE+K F PEE+S
Sbjct: 62 NPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEIS 121
Query: 433 SMVLTKMKETAEAYLGKTVHNAVITVRVLQ*LSK---TTHKRCRYHLRLERSPNHQ*THC 603
SMVL KMKETAEA+LG TV +AV+TV S+ T L + R N
Sbjct: 122 SMVLLKMKETAEAFLGTTVKDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAA 181
Query: 604 CCDCLRS*QKGY*ERNVLIFDL 669
L +KG+ ERNVLIFDL
Sbjct: 182 IAYGLD--KKGHGERNVLIFDL 201
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 184 bits (447), Expect = 7e-47
Identities = 104/190 (54%), Positives = 122/190 (64%), Gaps = 2/190 (1%)
Frame = +2
Query: 74 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 254 RTP-TTQYSMPNVSSDVSSKMLLCKPT*STGLSRLSVMEANLRSR*HIRVKTKPFSPRKS 430
P T + + + +S A + + + + K F+P +
Sbjct: 61 MNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEI 120
Query: 431 VPWCLRK*RKLPK-LISAKLCIMQLSRSAYFNDSQRQPTKDAGTISGLNVLRIINEPTAA 607
L K +K + + + ++ YFNDSQRQ TKDAG I+GLNVLRIINEPTAA
Sbjct: 121 SSMVLLKMKKTAEAFLEPTVKDAVVTVPTYFNDSQRQATKDAGAIAGLNVLRIINEPTAA 180
Query: 608 AIAYGLDKKG 637
AIAYGLDKKG
Sbjct: 181 AIAYGLDKKG 190
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 167 bits (406), Expect = 6e-42
Identities = 96/199 (48%), Positives = 129/199 (64%), Gaps = 7/199 (3%)
Frame = +2
Query: 74 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 254 RTP-TTQYSMPNVSS---DVSSKMLLCK--PT*STGLSRLSVMEANLRSR*HIRVKTKPF 415
R P T + + D S+ CK P G V+E ++ + + F
Sbjct: 61 RNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKG------EKRQF 114
Query: 416 SPRKSVPWCLRK*RKLPK-LISAKLCIMQLSRSAYFNDSQRQPTKDAGTISGLNVLRIIN 592
+P + L+K ++ + + + ++ AYFNDSQRQ TKDA TI+GLN +RIIN
Sbjct: 115 NPEEISAMVLQKMKETAETYLGHTVKDAVITVPAYFNDSQRQATKDAATIAGLNAIRIIN 174
Query: 593 EPTAAAIAYGLDKKGTENE 649
EPTAAA+AYGLD KG ++E
Sbjct: 175 EPTAAALAYGLD-KGIQDE 192
Score = 124 bits (300), Expect = 4e-29
Identities = 57/91 (62%), Positives = 70/91 (76%)
Frame = +1
Query: 238 QEPGGENPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFF 417
++ NP NT+FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V KGE + F
Sbjct: 56 KDQAARNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFN 115
Query: 418 PEEVSSMVLTKMKETAEAYLGKTVHNAVITV 510
PEE+S+MVL KMKETAE YLG TV +AVITV
Sbjct: 116 PEEISAMVLQKMKETAETYLGHTVKDAVITV 146
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 167 bits (406), Expect = 6e-42
Identities = 96/199 (48%), Positives = 129/199 (64%), Gaps = 7/199 (3%)
Frame = +2
Query: 74 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 254 RTP-TTQYSMPNVSS---DVSSKMLLCK--PT*STGLSRLSVMEANLRSR*HIRVKTKPF 415
R P T + + D S+ CK P G V+E ++ + + F
Sbjct: 61 RNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKG------EKRQF 114
Query: 416 SPRKSVPWCLRK*RKLPK-LISAKLCIMQLSRSAYFNDSQRQPTKDAGTISGLNVLRIIN 592
+P + L+K ++ + + + ++ AYFNDSQRQ TKDA TI+GLN +RIIN
Sbjct: 115 NPEEISAMVLQKMKETAETYLGHTVKDAVITVPAYFNDSQRQATKDAATIAGLNAIRIIN 174
Query: 593 EPTAAAIAYGLDKKGTENE 649
EPTAAA+AYGLD KG ++E
Sbjct: 175 EPTAAALAYGLD-KGIQDE 192
Score = 124 bits (300), Expect = 4e-29
Identities = 57/91 (62%), Positives = 70/91 (76%)
Frame = +1
Query: 238 QEPGGENPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFF 417
++ NP NT+FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V KGE + F
Sbjct: 56 KDQAARNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFN 115
Query: 418 PEEVSSMVLTKMKETAEAYLGKTVHNAVITV 510
PEE+S+MVL KMKETAE YLG TV +AVITV
Sbjct: 116 PEEISAMVLQKMKETAETYLGHTVKDAVITV 146
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 160 bits (388), Expect = 9e-40
Identities = 91/202 (45%), Positives = 126/202 (62%), Gaps = 7/202 (3%)
Frame = +2
Query: 74 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSTCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 254 RTP-TTQYSMPNV-----SSDVSSKMLLCKPT*STGLSRLSVMEANLRSR*HIRVKTKPF 415
R P T + + + + P G V+E ++ + + F
Sbjct: 61 RNPENTVFDAKRLIGRRFDEETVQSDIKHWPFTVKGKQGKPVVEVEVKG------EKREF 114
Query: 416 SPRKSVPWCLRK*RKLPK-LISAKLCIMQLSRSAYFNDSQRQPTKDAGTISGLNVLRIIN 592
+ + L+K ++ + ++ + ++ AYFNDSQRQ TKDA TI+GLN +RIIN
Sbjct: 115 NAEEISAMVLQKMKETAEAVLGHSVRDAVITVPAYFNDSQRQATKDAATIAGLNAIRIIN 174
Query: 593 EPTAAAIAYGLDKKGTENEMYL 658
EPTAAA+AYGLDK T+ + L
Sbjct: 175 EPTAAALAYGLDKGITDEKNIL 196
Score = 118 bits (285), Expect = 3e-27
Identities = 54/91 (59%), Positives = 69/91 (75%)
Frame = +1
Query: 238 QEPGGENPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFF 417
++ NP NT+FDAKRLIGR+F++ TVQ+D+KHWPF V GKP ++V KGE + F
Sbjct: 56 KDQAARNPENTVFDAKRLIGRRFDEETVQSDIKHWPFTVKGKQGKPVVEVEVKGEKREFN 115
Query: 418 PEEVSSMVLTKMKETAEAYLGKTVHNAVITV 510
EE+S+MVL KMKETAEA LG +V +AVITV
Sbjct: 116 AEEISAMVLQKMKETAEAVLGHSVRDAVITV 146
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 153 bits (372), Expect = 8e-38
Identities = 89/193 (46%), Positives = 126/193 (65%), Gaps = 6/193 (3%)
Frame = +2
Query: 92 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT--ERLIGDAAKNQVARTP- 262
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAF+ ERLIGDAAKNQ+ P
Sbjct: 33 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINPE 92
Query: 263 TTQYSMPNVSSDVSSKMLLCKPT*STGLSRLSVMEANLRSR*HIRV--KTKPFSPRKSVP 436
T + + ++ + + +++ + + ++V +TK F+P +
Sbjct: 93 NTIFDAKRLIGRFYNEKTVQQDIKHWPFK---IVDKSNKPNVEVKVGSETKQFTPEEVSA 149
Query: 437 WCLRK*RKLPK-LISAKLCIMQLSRSAYFNDSQRQPTKDAGTISGLNVLRIINEPTAAAI 613
L K +++ + + ++ ++ AYFND+Q+Q TKDAG+I+GLNV+RIINEPTAAAI
Sbjct: 150 MVLTKMKQIAESYLGHEVKNAVVTVPAYFNDAQKQATKDAGSIAGLNVVRIINEPTAAAI 209
Query: 614 AYGLDKKGTENEM 652
AYGLDKK E +
Sbjct: 210 AYGLDKKDGERNI 222
Score = 116 bits (280), Expect = 1e-26
Identities = 53/85 (62%), Positives = 64/85 (75%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSS 435
NP NTIFDAKRLIGR + + TVQ D+KHWPF++V KP ++V E K F PEEVS+
Sbjct: 90 NPENTIFDAKRLIGRFYNEKTVQQDIKHWPFKIVDKSNKPNVEVKVGSETKQFTPEEVSA 149
Query: 436 MVLTKMKETAEAYLGKTVHNAVITV 510
MVLTKMK+ AE+YLG V NAV+TV
Sbjct: 150 MVLTKMKQIAESYLGHEVKNAVVTV 174
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 153 bits (370), Expect = 1e-37
Identities = 91/194 (46%), Positives = 124/194 (63%), Gaps = 7/194 (3%)
Frame = +2
Query: 92 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVARTP- 262
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ +RLIGDAAKNQ+ P
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 263 TTQYSMPN-VSSDVSSKMLLCKPT*STGLSRLSVMEANLRSR*HIRV--KTKPFSPRKSV 433
T + + D + K + V++ + + ++V K F+P +
Sbjct: 96 NTIFDAKRLIGRDYNDKTVQA----DIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVS 151
Query: 434 PWCLRK*RKLPK-LISAKLCIMQLSRSAYFNDSQRQPTKDAGTISGLNVLRIINEPTAAA 610
L K +++ + + ++ ++ AYFND+QRQ TKDAGTI+GLNV+RIINEPTAAA
Sbjct: 152 AMVLVKMKEIAESYLGKEVKNAVVTVPAYFNDAQRQATKDAGTIAGLNVVRIINEPTAAA 211
Query: 611 IAYGLDKKGTENEM 652
IAYGLDKK E +
Sbjct: 212 IAYGLDKKDGERNI 225
Score = 122 bits (294), Expect = 2e-28
Identities = 55/85 (64%), Positives = 66/85 (77%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSS 435
NP NTIFDAKRLIGR + D TVQAD+KHWPF+V+ KP ++V ++K F PEEVS+
Sbjct: 93 NPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSA 152
Query: 436 MVLTKMKETAEAYLGKTVHNAVITV 510
MVL KMKE AE+YLGK V NAV+TV
Sbjct: 153 MVLVKMKEIAESYLGKEVKNAVVTV 177
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 153 bits (370), Expect = 1e-37
Identities = 91/194 (46%), Positives = 124/194 (63%), Gaps = 7/194 (3%)
Frame = +2
Query: 92 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVARTP- 262
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ +RLIGDAAKNQ+ P
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 263 TTQYSMPN-VSSDVSSKMLLCKPT*STGLSRLSVMEANLRSR*HIRV--KTKPFSPRKSV 433
T + + D + K + V++ + + ++V K F+P +
Sbjct: 96 NTIFDAKRLIGRDYNDKTVQA----DIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVS 151
Query: 434 PWCLRK*RKLPK-LISAKLCIMQLSRSAYFNDSQRQPTKDAGTISGLNVLRIINEPTAAA 610
L K +++ + + ++ ++ AYFND+QRQ TKDAGTI+GLNV+RIINEPTAAA
Sbjct: 152 AMVLVKMKEIAESYLGKEVKNAVVTVPAYFNDAQRQATKDAGTIAGLNVVRIINEPTAAA 211
Query: 611 IAYGLDKKGTENEM 652
IAYGLDKK E +
Sbjct: 212 IAYGLDKKDGERNI 225
Score = 122 bits (294), Expect = 2e-28
Identities = 55/85 (64%), Positives = 66/85 (77%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSS 435
NP NTIFDAKRLIGR + D TVQAD+KHWPF+V+ KP ++V ++K F PEEVS+
Sbjct: 93 NPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSA 152
Query: 436 MVLTKMKETAEAYLGKTVHNAVITV 510
MVL KMKE AE+YLGK V NAV+TV
Sbjct: 153 MVLVKMKEIAESYLGKEVKNAVVTV 177
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 116 bits (280), Expect = 1e-26
Identities = 76/187 (40%), Positives = 107/187 (57%), Gaps = 3/187 (1%)
Frame = +2
Query: 80 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQ-VA 253
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q V
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 254 RTPTTQYSMPNVSSDVSSKMLLCKPT*STGLSRLSVMEANLRSR*HIRVKTKPFSPRKSV 433
+ T ++ + + K + +++A+ + + K +SP +
Sbjct: 90 NSANTLFATKRLIGRRYEDPEVQK---DLKVVPYKIVKASNGDA-WVEAQGKVYSPSQVG 145
Query: 434 PWCLRK*RKLPK-LISAKLCIMQLSRSAYFNDSQRQPTKDAGTISGLNVLRIINEPTAAA 610
+ L K ++ + + + ++ AYFNDSQRQ TKDAG ISGLNVLR+INEPTAAA
Sbjct: 146 AFVLMKMKETAESYLGTTVNNAVVTVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAA 205
Query: 611 IAYGLDK 631
+AYGLDK
Sbjct: 206 LAYGLDK 212
Score = 80.2 bits (189), Expect = 1e-15
Identities = 41/86 (47%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVAYKGEDKTFFPEEVS 432
N NT+F KRLIGR++ED VQ D+K P+++V + G ++ + K + P +V
Sbjct: 90 NSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVEA----QGKVYSPSQVG 145
Query: 433 SMVLTKMKETAEAYLGKTVHNAVITV 510
+ VL KMKETAE+YLG TV+NAV+TV
Sbjct: 146 AFVLMKMKETAESYLGTTVNNAVVTV 171
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 114 bits (275), Expect = 5e-26
Identities = 75/187 (40%), Positives = 106/187 (56%), Gaps = 3/187 (1%)
Frame = +2
Query: 80 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQ-VA 253
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q V
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 254 RTPTTQYSMPNVSSDVSSKMLLCKPT*STGLSRLSVMEANLRSR*HIRVKTKPFSPRKSV 433
+ T ++ + + K + +++A+ + + K + P +
Sbjct: 90 NSANTLFATKRLIGRRYEDPEVQK---DLKVVPYKIVKASNGDA-WVEAQGKEYPPSQVG 145
Query: 434 PWCLRK*RKLPK-LISAKLCIMQLSRSAYFNDSQRQPTKDAGTISGLNVLRIINEPTAAA 610
+ L K ++ + + + ++ AYFNDSQRQ TKDAG ISGLNVLR+INEPTAAA
Sbjct: 146 AFVLMKMKETAESYLGTTVNNPVVTVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAA 205
Query: 611 IAYGLDK 631
+AYGLDK
Sbjct: 206 LAYGLDK 212
Score = 77.0 bits (181), Expect = 1e-14
Identities = 40/86 (46%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVAYKGEDKTFFPEEVS 432
N NT+F KRLIGR++ED VQ D+K P+++V + G ++ + K + P +V
Sbjct: 90 NSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVEA----QGKEYPPSQVG 145
Query: 433 SMVLTKMKETAEAYLGKTVHNAVITV 510
+ VL KMKETAE+YLG TV+N V+TV
Sbjct: 146 AFVLMKMKETAESYLGTTVNNPVVTV 171
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 94.3 bits (224), Expect = 7e-20
Identities = 62/186 (33%), Positives = 102/186 (54%), Gaps = 7/186 (3%)
Frame = +2
Query: 89 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVARTPT 265
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ + +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 266 TQYSMPNVSSDVSSKMLLCK--PT*STGLSR----LSVMEANLRSR*HIRVKTKPFSPRK 427
+ + + + +LL + P + + + +E + + +K +
Sbjct: 62 SLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEK---PLKFSAVTVSS 118
Query: 428 SVPWCLRK*RKLPKLISAKLCIMQLSRSAYFNDSQRQPTKDAGTISGLNVLRIINEPTAA 607
+ CL+ + + K ++ + AYFN +QR+ T++A I+GL VLRI+NEPTAA
Sbjct: 119 LILRCLKYNAERKLGLEVKSAVITV--PAYFNATQRRATEEAAEIAGLKVLRILNEPTAA 176
Query: 608 AIAYGL 625
AIAY L
Sbjct: 177 AIAYSL 182
Score = 68.1 bits (159), Expect = 5e-12
Identities = 35/83 (42%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +1
Query: 265 NTIFDAKRLIGRKFEDATVQADMKHWPFEV-VSDGGKPKIKVAYKGEDKTFFPEEVSSMV 441
N++FD KR+IGR+++D +Q DM WPF+V D G P +++ + F VSS++
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLI 120
Query: 442 LTKMKETAEAYLGKTVHNAVITV 510
L +K AE LG V +AVITV
Sbjct: 121 LRCLKYNAERKLGLEVKSAVITV 143
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 94.3 bits (224), Expect = 7e-20
Identities = 62/186 (33%), Positives = 102/186 (54%), Gaps = 7/186 (3%)
Frame = +2
Query: 89 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVARTPT 265
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ + +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 266 TQYSMPNVSSDVSSKMLLCK--PT*STGLSR----LSVMEANLRSR*HIRVKTKPFSPRK 427
+ + + + +LL + P + + + +E + + +K +
Sbjct: 62 SLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEK---PLKFSAVTVSS 118
Query: 428 SVPWCLRK*RKLPKLISAKLCIMQLSRSAYFNDSQRQPTKDAGTISGLNVLRIINEPTAA 607
+ CL+ + + K ++ + AYFN +QR+ T++A I+GL VLRI+NEPTAA
Sbjct: 119 LILRCLKYNAERKLGLEVKSAVITV--PAYFNATQRRATEEAAEIAGLKVLRILNEPTAA 176
Query: 608 AIAYGL 625
AIAY L
Sbjct: 177 AIAYSL 182
Score = 68.1 bits (159), Expect = 5e-12
Identities = 35/83 (42%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +1
Query: 265 NTIFDAKRLIGRKFEDATVQADMKHWPFEV-VSDGGKPKIKVAYKGEDKTFFPEEVSSMV 441
N++FD KR+IGR+++D +Q DM WPF+V D G P +++ + F VSS++
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLI 120
Query: 442 LTKMKETAEAYLGKTVHNAVITV 510
L +K AE LG V +AVITV
Sbjct: 121 LRCLKYNAERKLGLEVKSAVITV 143
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 62.9 bits (146), Expect = 2e-10
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFE--DATVQADMKHWPFEVVSDG-GKPKIKVAYKGEDKTFFPEE 426
NP TI+DAKR IGR FE + +D K +PF++ D GK ++ K +PEE
Sbjct: 94 NPKRTIYDAKRFIGRNFEKNNKDFLSDQKRYPFKINLDSEGKAFFEIPLDSGTKNVYPEE 153
Query: 427 VSSMVLTKMKETAEAYLGKTVHNAVIT 507
+ S+++ +K A +LG T+ VI+
Sbjct: 154 IGSLIIGYLKSAAAKHLGVTLGQVVIS 180
Score = 52.4 bits (120), Expect = 3e-07
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Frame = +2
Query: 500 LSRSAYFNDSQRQPTKDAGTISGLNVLRIINEPTAAAIAYGLDKK-GTENEMYLSL 664
+S A FN+ QR T A I+ + V R+I+EPTAAA+AYGL KK G EN + + L
Sbjct: 179 ISCPAEFNEKQRNFTAKAAEIAEMEVRRVISEPTAAALAYGLHKKQGVENVVVVDL 234
Score = 45.6 bits (103), Expect = 3e-05
Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Frame = +2
Query: 65 KYKMAKAPA--VGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTER-LIG 229
KY + P GIDLGTTYS +G++ G+ I+ +D G ++ PS VAF LIG
Sbjct: 25 KYGLPPPPPKIAGIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIG 84
Query: 230 DAAKNQVARTP 262
A Q P
Sbjct: 85 TRATEQQEHNP 95
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 62.1 bits (144), Expect = 3e-10
Identities = 50/190 (26%), Positives = 87/190 (45%), Gaps = 4/190 (2%)
Frame = +2
Query: 92 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVART-PTT 268
+G D+G +GV + G +E+I ND TP+ V+F +R +G AA+ V T
Sbjct: 4 LGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPKDRSMGVAARQAVTTNIKNT 63
Query: 269 QYSMPNVSSDVSSKMLLCKPT*STGLSRLSVMEANLRSR*HIRVKTKPFSPRKSVPWCLR 448
+ ++ S + + + + ++ + + F+P + + L
Sbjct: 64 VINFKHLIGRKFSDPVAQRFIPFIPCKVVKLPNDDIGVQVSYLGEPHTFTPEQVLAALLT 123
Query: 449 K*RKLPKLISA---KLCIMQLSRSAYFNDSQRQPTKDAGTISGLNVLRIINEPTAAAIAY 619
K R + + + K+ L+ +YF D QR+ A +GLN LRI+NE TA A+AY
Sbjct: 124 KLRTIVESQLSDVKKVSDCVLAVPSYFTDVQRRAVLSAIQYAGLNSLRIVNETTAIALAY 183
Query: 620 GLDKKGTENE 649
G+ K+ E
Sbjct: 184 GIYKQDLPEE 193
Score = 55.6 bits (128), Expect = 3e-08
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 6/130 (4%)
Frame = +1
Query: 139 AREGGDHRQRPGQQDHSVLCCVH---RHRASHRRCRQEPGGENPNNTIFDAKRLIGRKFE 309
AR+GG H+ CV + R+ RQ N NT+ + K LIGRKF
Sbjct: 18 ARQGGIEVITNDYSLHATPACVSFGPKDRSMGVAARQAVT-TNIKNTVINFKHLIGRKFS 76
Query: 310 DATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLG-- 480
D Q + P +VV ++V+Y GE TF PE+V + +LTK++ E+ L
Sbjct: 77 DPVAQRFIPFIPCKVVKLPNDDIGVQVSYLGEPHTFTPEQVLAALLTKLRTIVESQLSDV 136
Query: 481 KTVHNAVITV 510
K V + V+ V
Sbjct: 137 KKVSDCVLAV 146
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 50.8 bits (116), Expect = 9e-07
Identities = 46/189 (24%), Positives = 88/189 (46%), Gaps = 7/189 (3%)
Frame = +2
Query: 89 AVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVARTPT 265
A+ IDLGT + +G+ + G ++I N + R TP+ V D R DAA R P
Sbjct: 26 AMTIDLGTQFLKIGIVKPGIPMDIALNTESRRKTPNVVMIQDGHRTFADAAIGMQVRYPH 85
Query: 266 TQYSMPNVSSDVSSKMLLCKPT*STGLSRLSVMEAN----LRSR*HIRVKTKPFSPRKSV 433
+ N D+ K P+ R + E + S + ++ + ++
Sbjct: 86 LVHGQLN---DLVGKSTQ-HPSFELFKRRNTFFEVDDAPKNASSINFKLGGESYTVEALT 141
Query: 434 PWCLRK*RKLPK--LISAKLCIMQLSRSAYFNDSQRQPTKDAGTISGLNVLRIINEPTAA 607
L +K + +A++ + ++ YF ++R + A ++GL VL++IN+ TAA
Sbjct: 142 AMILANAKKFTEEYAQAAEIKDVVITVPVYFTPAERLAVERAAQMAGLTVLQLINDGTAA 201
Query: 608 AIAYGLDKK 634
A+++G+ ++
Sbjct: 202 ALSHGIFRR 210
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 47.6 bits (108), Expect = 8e-06
Identities = 42/189 (22%), Positives = 91/189 (48%), Gaps = 3/189 (1%)
Frame = +2
Query: 77 AKAPAVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253
A A+ IDLG+ + +G+ + G ++I+ N + R TP+ ++F + ER +AA +
Sbjct: 8 AALAAMSIDLGSQFIKIGLVKPGVPMDIVLNKESRRKTPNVISFKNDERFFAEAAAAMSS 67
Query: 254 RTPTTQYSMPNVSSDVSSKMLLCKPT*STGLSRLSVMEAN-LRSR*HIRVKTKPFSPRKS 430
P Q S + S ++ K + E + +R K + ++
Sbjct: 68 SHP--QSSYNFLLSMIARKEGDDAFVTFQKTFPFTAFEFDEVRKTVVFPYKEEKYNVETL 125
Query: 431 VPWCLRK*RKLPKLISAKLCI-MQLSRSAYFNDSQRQPTKDAGTISGLNVLRIINEPTAA 607
+ L +K+ + + + + ++ + N ++R+ A I+GLN+L+++N+ +AA
Sbjct: 126 LAMILWNAKKVTEAYADQTVKDVVITVPIFLNQAERRAIASAAEIAGLNLLQLLNDGSAA 185
Query: 608 AIAYGLDKK 634
A+ YG+ ++
Sbjct: 186 ALNYGVFRR 194
Score = 33.9 bits (74), Expect = 0.10
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 289 LIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETA 465
+I RK D K +PF D + + YK E+K + E + +M+L K+
Sbjct: 80 MIARKEGDDAFVTFQKTFPFTAFEFDEVRKTVVFPYK-EEK-YNVETLLAMILWNAKKVT 137
Query: 466 EAYLGKTVHNAVITVRV 516
EAY +TV + VITV +
Sbjct: 138 EAYADQTVKDVVITVPI 154
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 47.6 bits (108), Expect = 8e-06
Identities = 42/189 (22%), Positives = 91/189 (48%), Gaps = 3/189 (1%)
Frame = +2
Query: 77 AKAPAVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253
A A+ IDLG+ + +G+ + G ++I+ N + R TP+ ++F + ER +AA +
Sbjct: 24 AALAAMSIDLGSQFIKIGLVKPGVPMDIVLNKESRRKTPNVISFKNDERFFAEAAAAMSS 83
Query: 254 RTPTTQYSMPNVSSDVSSKMLLCKPT*STGLSRLSVMEAN-LRSR*HIRVKTKPFSPRKS 430
P Q S + S ++ K + E + +R K + ++
Sbjct: 84 SHP--QSSYNFLLSMIARKEGDDAFVTFQKTFPFTAFEFDEVRKTVVFPYKEEKYNVETL 141
Query: 431 VPWCLRK*RKLPKLISAKLCI-MQLSRSAYFNDSQRQPTKDAGTISGLNVLRIINEPTAA 607
+ L +K+ + + + + ++ + N ++R+ A I+GLN+L+++N+ +AA
Sbjct: 142 LAMILWNAKKVTEAYADQTVKDVVITVPIFLNQAERRAIASAAEIAGLNLLQLLNDGSAA 201
Query: 608 AIAYGLDKK 634
A+ YG+ ++
Sbjct: 202 ALNYGVFRR 210
Score = 33.9 bits (74), Expect = 0.10
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 289 LIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETA 465
+I RK D K +PF D + + YK E+K + E + +M+L K+
Sbjct: 96 MIARKEGDDAFVTFQKTFPFTAFEFDEVRKTVVFPYK-EEK-YNVETLLAMILWNAKKVT 153
Query: 466 EAYLGKTVHNAVITVRV 516
EAY +TV + VITV +
Sbjct: 154 EAYADQTVKDVVITVPI 170
>AF022979-6|ABD94088.1| 94|Caenorhabditis elegans Hypothetical
protein T02B11.8 protein.
Length = 94
Score = 31.5 bits (68), Expect = 0.56
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 268 CCWGSRHLVLGGISDETLGVCERNIRRSGPVA 173
CC G+ H G S T+G C+R S PV+
Sbjct: 58 CCPGTNHCCPPGFSCTTIGTCKRTTTLSNPVS 89
>U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 8 protein.
Length = 452
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +1
Query: 205 HRHRASHRR--CRQEPGGENPNNTIFDAKRLIGR-KFEDATVQADM 333
H+HR SHR Q+ G+ NN + DA R + ++ D + + M
Sbjct: 347 HQHRKSHRLRPSHQQQYGDEQNNAVADAGRSVNAPEYGDGSAPSHM 392
>AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical
protein Y116A8C.13 protein.
Length = 833
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 144 GRWRSSPTTR-ATGPLRLMLRSQTPSVSSEMPPRT 245
G W R ATGP + + +Q P + S MPP T
Sbjct: 84 GSWSVEIQERIATGPPQKPISAQKPEIQSPMPPMT 118
>AF078792-4|AAN84813.1| 261|Caenorhabditis elegans Hypothetical
protein Y40D12A.1b protein.
Length = 261
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/75 (22%), Positives = 27/75 (36%)
Frame = +1
Query: 169 PGQQDHSVLCCVHRHRASHRRCRQEPGGENPNNTIFDAKRLIGRKFEDATVQADMKHWPF 348
PG +V + R R + G N N F+ + + +D+ ++ M W F
Sbjct: 131 PGYFIEAVHVALMRSRGKNEEMSYWKWGANTLNPYFENRSCFDKLIDDSHIRPTMDQWYF 190
Query: 349 EVVSDGGKPKIKVAY 393
DG K Y
Sbjct: 191 GPSDDGDIEKFTEEY 205
>AF078792-3|AAC26945.2| 635|Caenorhabditis elegans Hypothetical
protein Y40D12A.1a protein.
Length = 635
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/75 (22%), Positives = 27/75 (36%)
Frame = +1
Query: 169 PGQQDHSVLCCVHRHRASHRRCRQEPGGENPNNTIFDAKRLIGRKFEDATVQADMKHWPF 348
PG +V + R R + G N N F+ + + +D+ ++ M W F
Sbjct: 131 PGYFIEAVHVALMRSRGKNEEMSYWKWGANTLNPYFENRSCFDKLIDDSHIRPTMDQWYF 190
Query: 349 EVVSDGGKPKIKVAY 393
DG K Y
Sbjct: 191 GPSDDGDIEKFTEEY 205
>Z81136-5|CAB03460.2| 733|Caenorhabditis elegans Hypothetical
protein W02B8.4 protein.
Length = 733
Score = 27.5 bits (58), Expect = 9.1
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +1
Query: 268 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 447
T+ AKR I R E T+++D PF +++ +K A K +D+ + ++L
Sbjct: 205 TVRRAKRSIIRNAESYTLKSDFDKSPFSIITKHLTNSVK-ALKKKDRI---SKWQDIILR 260
Query: 448 KMKETAEAYLGKTVHN 495
KE+++ K + N
Sbjct: 261 IQKESSQLRKRKEIEN 276
>AJ276590-1|CAB91651.1| 679|Caenorhabditis elegans LET-413 protein
protein.
Length = 679
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 230 DAAKNQVARTPTTQYSMPNVSS-DVSSKMLLCKPT*STGLSRLSVMEANLRS 382
D ++NQ+ R P MPN++ ++S ++ P+ L RL +++A+ S
Sbjct: 226 DVSENQIIRLPENLGRMPNLTDLNISINEIIELPSSFGELKRLQMLKADRNS 277
>AF068716-10|AAC17752.2| 679|Caenorhabditis elegans Lethal protein
413, isoform a protein.
Length = 679
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 230 DAAKNQVARTPTTQYSMPNVSS-DVSSKMLLCKPT*STGLSRLSVMEANLRS 382
D ++NQ+ R P MPN++ ++S ++ P+ L RL +++A+ S
Sbjct: 226 DVSENQIIRLPENLGRMPNLTDLNISINEIIELPSSFGELKRLQMLKADRNS 277
>AF068716-9|AAT81195.1| 699|Caenorhabditis elegans Lethal protein
413, isoform b protein.
Length = 699
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 230 DAAKNQVARTPTTQYSMPNVSS-DVSSKMLLCKPT*STGLSRLSVMEANLRS 382
D ++NQ+ R P MPN++ ++S ++ P+ L RL +++A+ S
Sbjct: 226 DVSENQIIRLPENLGRMPNLTDLNISINEIIELPSSFGELKRLQMLKADRNS 277
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,647,179
Number of Sequences: 27780
Number of extensions: 382750
Number of successful extensions: 1178
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1161
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -