Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20288
(635 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22127| Best HMM Match : LRR_1 (HMM E-Value=1.1e-08) 64 9e-11
SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0) 44 8e-05
SB_15974| Best HMM Match : LRR_1 (HMM E-Value=7.1e-15) 42 6e-04
SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13) 40 0.002
SB_21459| Best HMM Match : LRR_1 (HMM E-Value=1.8e-11) 39 0.004
SB_52308| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_41385| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_20569| Best HMM Match : LRR_1 (HMM E-Value=1.1e-27) 37 0.012
SB_15999| Best HMM Match : LRR_1 (HMM E-Value=1.7e-21) 36 0.028
SB_28720| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.036
SB_7548| Best HMM Match : LRR_1 (HMM E-Value=8.7e-14) 35 0.048
SB_35937| Best HMM Match : LRR_1 (HMM E-Value=7.1e-09) 35 0.048
SB_22441| Best HMM Match : LRR_1 (HMM E-Value=1.8e-19) 34 0.084
SB_14995| Best HMM Match : LRR_1 (HMM E-Value=4e-13) 34 0.084
SB_48318| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_46788| Best HMM Match : LRR_1 (HMM E-Value=9.1e-12) 34 0.11
SB_5894| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_5807| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_45576| Best HMM Match : LRR_1 (HMM E-Value=2.7e-14) 33 0.19
SB_51944| Best HMM Match : LRR_1 (HMM E-Value=7.7e-34) 33 0.26
SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13) 32 0.45
SB_21029| Best HMM Match : PX (HMM E-Value=9.1e-15) 32 0.45
SB_7052| Best HMM Match : LRR_1 (HMM E-Value=2e-12) 32 0.45
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.59
SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19) 30 1.4
SB_51703| Best HMM Match : LRR_1 (HMM E-Value=1.9e-06) 30 1.4
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_13921| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_19634| Best HMM Match : LRR_1 (HMM E-Value=2.6e-17) 28 5.5
SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20) 28 5.5
SB_8473| Best HMM Match : Transgly (HMM E-Value=2e-19) 28 7.3
SB_29723| Best HMM Match : EGF_2 (HMM E-Value=0.55) 28 7.3
SB_19790| Best HMM Match : LRR_1 (HMM E-Value=0.00028) 28 7.3
SB_16901| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_47473| Best HMM Match : LRR_1 (HMM E-Value=2.8e-10) 27 9.7
SB_19622| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_14633| Best HMM Match : LRR_1 (HMM E-Value=3.4e-12) 27 9.7
>SB_22127| Best HMM Match : LRR_1 (HMM E-Value=1.1e-08)
Length = 175
Score = 64.1 bits (149), Expect = 9e-11
Identities = 29/48 (60%), Positives = 36/48 (75%)
Frame = +3
Query: 489 FG*Q*F*FLPPEIGNLKNLQILSMRENDLIEVPRELGQLARLRELHLQ 632
FG F +PPEIG LKNLQ+L R+NDLI +P E+G+L LRELH+Q
Sbjct: 44 FGDNDFEMIPPEIGQLKNLQVLVFRDNDLISLPPEIGELKSLRELHIQ 91
Score = 36.7 bits (81), Expect = 0.016
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +3
Query: 513 LPPEIGNLKNLQILSMRENDLIEVPRELGQL 605
LPPEIG LK+L+ L ++ N L+ +P ELG L
Sbjct: 75 LPPEIGELKSLRELHIQNNRLMVLPPELGAL 105
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 522 EIGNLKNLQILSMRENDLIEVPRELGQLARLREL 623
+I NL L+ L +ND +P E+GQL L+ L
Sbjct: 32 DISNLTQLRALYFGDNDFEMIPPEIGQLKNLQVL 65
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +2
Query: 125 EIDLVDKGISSLEEIPGLFSLENITRLXLSHNKISVVP 238
E+DL DKGISSL +I L L L N ++P
Sbjct: 19 ELDLCDKGISSLNDISNLTQLR---ALYFGDNDFEMIP 53
>SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0)
Length = 680
Score = 44.4 bits (100), Expect = 8e-05
Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +1
Query: 304 PVSLSSLPKLRILNVSLNKLYNLPRGFGS-FPVLEILDLTYNNLNEKVLPGNFFIMDSLR 480
P SL L KLR+LN++ NKL L FG+ L L + N+L+E L +F +M +L+
Sbjct: 102 PESLGKLSKLRVLNLTGNKLEKLRDDFGAGLASLTELRIDENDLSE--LSVSFTLMKNLK 159
Query: 481 ALYLGDNDFD 510
L LGDN +
Sbjct: 160 VLELGDNHIE 169
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/67 (32%), Positives = 33/67 (49%)
Frame = +1
Query: 304 PVSLSSLPKLRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDSLRA 483
P +L KL ++N+S N + LP FG L+ D+T N++ LP F L
Sbjct: 172 PEDFGNLRKLEVVNLSQNNIEKLPESFGFLCCLKSFDITGNHIEN--LPERFESACFLEH 229
Query: 484 LYLGDND 504
LY +N+
Sbjct: 230 LYADNNN 236
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/68 (27%), Positives = 38/68 (55%)
Frame = +1
Query: 307 VSLSSLPKLRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDSLRAL 486
VS + + L++L + N + LP FG+ LE+++L+ NN+ + LP +F + L++
Sbjct: 150 VSFTLMKNLKVLELGDNHIERLPEDFGNLRKLEVVNLSQNNIEK--LPESFGFLCCLKSF 207
Query: 487 YLGDNDFD 510
+ N +
Sbjct: 208 DITGNHIE 215
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 519 PEIGNLKNLQILSMRENDLIEVPRELGQLARLRELHLQG 635
PE+ L N+ L + NDL +P +LG LA L EL+L G
Sbjct: 35 PEVAAL-NITTLKLDFNDLQRLPDDLGSLASLTELYLTG 72
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/66 (30%), Positives = 33/66 (50%)
Frame = +1
Query: 304 PVSLSSLPKLRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDSLRA 483
P + +L L L + N+L +LP F + ++ LDL N L+E +P +++L
Sbjct: 396 PENFGNLTSLVELRLDSNQLSSLPASFANLTNVKTLDLYRNKLSE--IPRVLLKLENLMR 453
Query: 484 LYLGDN 501
L L N
Sbjct: 454 LDLDGN 459
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +3
Query: 513 LPPEIGNL--KNLQILSMRENDLIEVPRELGQLARLRELHL 629
LP G++ K L L + N + ++P +G+L L+ LHL
Sbjct: 265 LPDHFGSISGKTLSSLDLSGNRITKLPDSMGELKELKTLHL 305
Score = 27.5 bits (58), Expect = 9.7
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +1
Query: 304 PVSLSSLPKLRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDSLRA 483
P S L L+ +++ N + NLP F S LE L NN+ LP F + ++
Sbjct: 195 PESFGFLCCLKSFDITGNHIENLPERFESACFLEHLYADNNNIT--WLPDWFGDLPNIIN 252
Query: 484 LYLGDND 504
L L DN+
Sbjct: 253 LCLSDNE 259
>SB_15974| Best HMM Match : LRR_1 (HMM E-Value=7.1e-15)
Length = 272
Score = 41.5 bits (93), Expect = 6e-04
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +1
Query: 304 PVSLSSLPKLRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLP-GNFFIMDSL 477
P L L L++L+V+ NKL +LP+ G L+ LD+ NNL L GN ++ SL
Sbjct: 80 PADLDELRSLQVLDVANNKLKSLPKAIGGLSSLQTLDVQGNNLQSLPLEIGNLKLLRSL 138
Score = 36.3 bits (80), Expect = 0.021
Identities = 15/41 (36%), Positives = 27/41 (65%)
Frame = +3
Query: 513 LPPEIGNLKNLQILSMRENDLIEVPRELGQLARLRELHLQG 635
LP ++ L++LQ+L + N L +P+ +G L+ L+ L +QG
Sbjct: 79 LPADLDELRSLQVLDVANNKLKSLPKAIGGLSSLQTLDVQG 119
Score = 31.9 bits (69), Expect = 0.45
Identities = 23/72 (31%), Positives = 35/72 (48%)
Frame = +1
Query: 313 LSSLPKLRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDSLRALYL 492
L L RIL +S N+L +LP L++LD+ N L K LP + SL+ L +
Sbjct: 60 LKDLADARILVLSNNRLTSLPADLDELRSLQVLDVANNKL--KSLPKAIGGLSSLQTLDV 117
Query: 493 GDNDFDFYHLKL 528
N+ L++
Sbjct: 118 QGNNLQSLPLEI 129
>SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 775
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/70 (35%), Positives = 35/70 (50%)
Frame = +1
Query: 304 PVSLSSLPKLRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDSLRA 483
P SL L KLR+LN+ N L ++P GS + IL L N L LP + M L+
Sbjct: 495 PPSLGYLRKLRVLNIDENFLESIPSELGSCTAMTILSLRDNRLVH--LPDSIGRMPKLQV 552
Query: 484 LYLGDNDFDF 513
+ L N ++
Sbjct: 553 INLASNRLEY 562
Score = 35.9 bits (79), Expect = 0.028
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +3
Query: 513 LPPEIGNLKNLQILSMRENDLIEVPRELGQLARLRELHLQ 632
LPP +G L+ L++L++ EN L +P ELG + L L+
Sbjct: 494 LPPSLGYLRKLRVLNIDENFLESIPSELGSCTAMTILSLR 533
Score = 35.9 bits (79), Expect = 0.028
Identities = 13/39 (33%), Positives = 28/39 (71%)
Frame = +3
Query: 513 LPPEIGNLKNLQILSMRENDLIEVPRELGQLARLRELHL 629
+P E+G+ + ILS+R+N L+ +P +G++ +L+ ++L
Sbjct: 517 IPSELGSCTAMTILSLRDNRLVHLPDSIGRMPKLQVINL 555
Score = 31.9 bits (69), Expect = 0.45
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +1
Query: 304 PVSLSSLPKLRILNVSLNKLYNLPRGFGSFPVLEILDLTYN 426
P S+ +PKL+++N++ N+L LP F L+ L L+ N
Sbjct: 541 PDSIGRMPKLQVINLASNRLEYLPYSFHKLVSLKALWLSEN 581
>SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13)
Length = 1383
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/70 (32%), Positives = 36/70 (51%)
Frame = +1
Query: 304 PVSLSSLPKLRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDSLRA 483
P ++ L LR L+ N L +LP GS LE+L+LT+N L + L + +++ L+
Sbjct: 471 PDTIGRLHNLRFLHCDYNVLESLPDQMGSLTELEVLELTHNKLEK--LSASLGLLNKLKC 528
Query: 484 LYLGDNDFDF 513
L N F
Sbjct: 529 LKFAKNRLRF 538
Score = 28.3 bits (60), Expect = 5.5
Identities = 21/66 (31%), Positives = 28/66 (42%)
Frame = +1
Query: 313 LSSLPKLRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDSLRALYL 492
+S L +L+ L ++ NKL LP G L L YN L LP + L L L
Sbjct: 451 ISDLKQLQKLRLTDNKLRRLPDTIGRLHNLRFLHCDYNVLES--LPDQMGSLTELEVLEL 508
Query: 493 GDNDFD 510
N +
Sbjct: 509 THNKLE 514
>SB_21459| Best HMM Match : LRR_1 (HMM E-Value=1.8e-11)
Length = 137
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +3
Query: 513 LPPEIGNLKNLQILSMRENDLIEVPRELGQLARLRELHL 629
+PPE+G L+ L+ L + +N L +P L +L+RLR L L
Sbjct: 15 IPPEVGQLRTLRALYLCDNKLESIPSTLTKLSRLRSLSL 53
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 513 LPPEIGNLKNLQILSMRENDLI 578
LP EI LKNL+ LS+R+N L+
Sbjct: 61 LPVEIVKLKNLEELSLRDNPLV 82
>SB_52308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1407
Score = 37.5 bits (83), Expect = 0.009
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 513 LPPEIGNLKNLQILSMRENDLIEVPRELGQLARLRELHL 629
LPP +G L NLQ L ++ N + +P ELG L L+ L L
Sbjct: 61 LPPALGELVNLQELYLQHNSIELLPDELGNLVNLKRLGL 99
Score = 36.3 bits (80), Expect = 0.021
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +3
Query: 513 LPPEIGNLKNLQILSMRENDLIEVPRELGQLARLRELHLQG 635
LP E+GNL NL+ L + N L +VP G+ +L L++ G
Sbjct: 84 LPDELGNLVNLKRLGLAHNKLNDVPLYFGKFRQLEWLNISG 124
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +1
Query: 304 PVSLSSLPKLRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDSLRA 483
P L +L L+ L ++ NKL ++P FG F LE L+++ N + +V+P + L+
Sbjct: 85 PDELGNLVNLKRLGLAHNKLNDVPLYFGKFRQLEWLNISGNAI--EVVPVFLLRIPRLKY 142
Query: 484 LYL 492
LYL
Sbjct: 143 LYL 145
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +3
Query: 534 LKNLQILSMRENDLIEVPRELGQLARLRELHLQ 632
L LQ L + N IE+P LG+L L+EL+LQ
Sbjct: 45 LYTLQSLELSYNGFIELPPALGELVNLQELYLQ 77
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/30 (46%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +2
Query: 152 SSLEEIPG-LFSLENITRLXLSHNKISVVP 238
+S+E +P L +L N+ RL L+HNK++ VP
Sbjct: 79 NSIELLPDELGNLVNLKRLGLAHNKLNDVP 108
>SB_41385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 515
Score = 37.5 bits (83), Expect = 0.009
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 513 LPPEIGNLKNLQILSMRENDLIEVPRELGQLARLRELHL 629
+PP+I L NL+ L + N L +P E+G L LREL L
Sbjct: 66 IPPDISRLCNLRHLDVSSNKLRSLPAEMGDLVTLRELLL 104
Score = 36.3 bits (80), Expect = 0.021
Identities = 26/66 (39%), Positives = 33/66 (50%)
Frame = +1
Query: 304 PVSLSSLPKLRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDSLRA 483
P +S L LR L+VS NKL +LP G L L L+ N L +VLP + L+
Sbjct: 67 PPDISRLCNLRHLDVSSNKLRSLPAEMGDLVTLRELLLSNNGL--RVLPNELGKLFQLQT 124
Query: 484 LYLGDN 501
L L N
Sbjct: 125 LGLSGN 130
Score = 35.1 bits (77), Expect = 0.048
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +3
Query: 513 LPPEIGNLKNLQILSMRENDLIEVPRELGQLARLRELHLQG 635
LP E+G+L L+ L + N L +P ELG+L +L+ L L G
Sbjct: 89 LPAEMGDLVTLRELLLSNNGLRVLPNELGKLFQLQTLGLSG 129
>SB_20569| Best HMM Match : LRR_1 (HMM E-Value=1.1e-27)
Length = 309
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +1
Query: 304 PVSLSSLPKLRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNL 432
PV L L +LR L + N+L LP GFG L++L L++NNL
Sbjct: 84 PVELVYLSRLRELCLDHNQLTLLPSGFGRLTNLKVLCLSHNNL 126
Score = 36.3 bits (80), Expect = 0.021
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +3
Query: 513 LPPEIGNLKNLQILSMRENDLIEVPRELGQLARLRELHL 629
+P + LK++QIL + +N +I P EL L+RLREL L
Sbjct: 60 IPDSLKKLKHVQILLLNDNQIIMPPVELVYLSRLRELCL 98
Score = 33.9 bits (74), Expect = 0.11
Identities = 24/66 (36%), Positives = 30/66 (45%)
Frame = +1
Query: 304 PVSLSSLPKLRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDSLRA 483
P +S L L+ L++ N L +LP F P L LDL N E P N + SL
Sbjct: 176 PDKISGLVSLQWLSLRENHLSSLPSEFFKLPKLAHLDLNMNKFEE--FPENLIGLVSLEC 233
Query: 484 LYLGDN 501
L L N
Sbjct: 234 LSLRGN 239
>SB_15999| Best HMM Match : LRR_1 (HMM E-Value=1.7e-21)
Length = 791
Score = 35.9 bits (79), Expect = 0.028
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +3
Query: 525 IGNLKNLQILSMRENDLIEVPRELGQLARLRELHL 629
IGNLK L+ LS+REN + +PR +GQL L L +
Sbjct: 241 IGNLKLLERLSLRENKIKILPRVIGQLVHLVTLDI 275
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 304 PVSLSSLPKLRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNL 432
P + L L +L +S N L LPRG G+ L +LD+ N L
Sbjct: 741 PEDIQWLVNLEVLILSNNLLKKLPRGIGALRKLRVLDIEENKL 783
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +3
Query: 513 LPPEIGNLKNLQILSMRENDLIEVPRELGQLARLRELHLQ 632
LP +I L NL++L + N L ++PR +G L +LR L ++
Sbjct: 740 LPEDIQWLVNLEVLILSNNLLKKLPRGIGALRKLRVLDIE 779
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/69 (33%), Positives = 34/69 (49%)
Frame = +1
Query: 304 PVSLSSLPKLRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDSLRA 483
P+ S L LNV+ N++ LP LE+L L+ NNL +K LP + LR
Sbjct: 718 PLDFGSWISLVELNVATNQISKLPEDIQWLVNLEVLILS-NNLLKK-LPRGIGALRKLRV 775
Query: 484 LYLGDNDFD 510
L + +N +
Sbjct: 776 LDIEENKLE 784
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = +1
Query: 340 LNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDSLRALYLGDN 501
LNV N+L +LP FGS+ L L++ N +++ LP + + +L L L +N
Sbjct: 707 LNVKDNQLTSLPLDFGSWISLVELNVATNQISK--LPEDIQWLVNLEVLILSNN 758
>SB_28720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 672
Score = 35.5 bits (78), Expect = 0.036
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 513 LPPEIGNLKNLQILSMRENDLIEVPRELGQLARLRELHLQG 635
LP E+G+ L +LS+R+N L +P E+G L L + G
Sbjct: 20 LPVELGSCTKLSVLSLRDNLLQRLPTEIGNCRNLHVLDVSG 60
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 513 LPPEIGNLKNLQILSMRENDLIEVPRELGQL 605
LP EIGN +NL +L + N L +P +G L
Sbjct: 43 LPTEIGNCRNLHVLDVSGNRLECLPLTIGTL 73
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +1
Query: 313 LSSLPKLRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNL 432
+ L KL +LNV N+L LP GS L +L L N L
Sbjct: 1 MGKLHKLSLLNVDRNRLEVLPVELGSCTKLSVLSLRDNLL 40
>SB_7548| Best HMM Match : LRR_1 (HMM E-Value=8.7e-14)
Length = 384
Score = 35.1 bits (77), Expect = 0.048
Identities = 24/69 (34%), Positives = 36/69 (52%)
Frame = +1
Query: 304 PVSLSSLPKLRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDSLRA 483
P S L L L ++ NKL LP F L+ LDL++N L LP N +M+SL +
Sbjct: 100 PDSFGYLFHLETLFINNNKLRELPDTFCYLARLQKLDLSHNQLLH--LPENIGLMESLLS 157
Query: 484 LYLGDNDFD 510
+ + N+ +
Sbjct: 158 INVSYNELE 166
Score = 31.5 bits (68), Expect = 0.59
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +3
Query: 510 FLPPEIGNLKNLQILSMRENDLIEVPRELGQLARLRELHL 629
FLP G L +L+ L + N L E+P LARL++L L
Sbjct: 98 FLPDSFGYLFHLETLFINNNKLRELPDTFCYLARLQKLDL 137
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +1
Query: 304 PVSLSSLPKLRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDSLRA 483
P + L +L+ L++S N+L +LP G L ++++YN L + LP + +L+
Sbjct: 123 PDTFCYLARLQKLDLSHNQLLHLPENIGLMESLLSINVSYNEL--EALPASISKSKTLKL 180
Query: 484 L 486
+
Sbjct: 181 I 181
>SB_35937| Best HMM Match : LRR_1 (HMM E-Value=7.1e-09)
Length = 224
Score = 35.1 bits (77), Expect = 0.048
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +3
Query: 534 LKNLQILSMRENDLIEVPRELGQLARLRELHLQG 635
LK+L++L + N L +P ++G+L LREL+L+G
Sbjct: 51 LKDLELLDLSYNRLSFIPADIGKLRALRELNLEG 84
>SB_22441| Best HMM Match : LRR_1 (HMM E-Value=1.8e-19)
Length = 261
Score = 34.3 bits (75), Expect = 0.084
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +1
Query: 310 SLSSLPKLRILNVSLNKLYNLPRG-FGSFPVLEILDLTYNNLNEKVLPGNFFIMDSLRAL 486
+L L L+ L +S N + L +G F S +L +L+L N + E + G F + SLR L
Sbjct: 127 TLEGLRDLQRLRLSKNTITRLYKGAFESLHMLTVLELADNEI-EFIDVGAFGGLFSLRTL 185
Query: 487 YLGDNDFDFY 516
+LG N F+
Sbjct: 186 FLGGNLIKFF 195
Score = 33.1 bits (72), Expect = 0.19
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +1
Query: 316 SSLPKLRILNVSLNKLYNLPRG-FGSFPVLEILDLTYNNLNEKVLPGNFFIMDSLRALYL 492
S+L KLR S N++ NL R F +P L+ L + NN E + G F L LYL
Sbjct: 60 STLGKLR---ASYNRITNLTRSSFAGYPYLKWLSVE-NNFMEVIENGTFLRQALLDELYL 115
Query: 493 GDNDFD 510
G N +
Sbjct: 116 GYNKLE 121
>SB_14995| Best HMM Match : LRR_1 (HMM E-Value=4e-13)
Length = 188
Score = 34.3 bits (75), Expect = 0.084
Identities = 14/35 (40%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
Frame = +2
Query: 152 SSLEEIP-GLFSLENITRLXLSHNKISVVPAALAN 253
+ L ++P GLF+L+N+ L LS N+++++P+ L+N
Sbjct: 91 NQLRDLPRGLFNLQNLQVLGLSDNELTILPSVLSN 125
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 513 LPPEIGNLKNLQILSMRENDLIEVPRELGQLARLREL 623
LP + NL+NLQ+L + +N+L +P L L LR L
Sbjct: 96 LPRGLFNLQNLQVLGLSDNELTILPSVLSNLVNLRIL 132
>SB_48318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1243
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 510 FLPPEIGNLKNLQILSMRENDLIEVPRELGQLARLRELHLQ 632
FLP ++ L L++L + N + +P G L RLR L+LQ
Sbjct: 112 FLPAQVCTLVQLEVLDLANNFIRTLPYSSGHLTRLRWLNLQ 152
Score = 33.1 bits (72), Expect = 0.19
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +3
Query: 513 LPPEIGNLKNLQILSMRENDLIEVPRELGQLARLRELHL 629
+P + L+ LQ+L + +N++ +P +L L LREL+L
Sbjct: 182 VPEVVTKLEKLQVLILSDNEIGALPADLNALENLRELYL 220
>SB_46788| Best HMM Match : LRR_1 (HMM E-Value=9.1e-12)
Length = 139
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 510 FLPPEIGNLKNLQILSMRENDLIEVPRELGQLARLRELHLQ 632
FLP ++ L L++L + N + +P G L RLR L+LQ
Sbjct: 11 FLPAQVCTLVQLEVLDLANNFIRTLPYSSGHLTRLRWLNLQ 51
>SB_5894| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 379
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +1
Query: 304 PVSLSSLPKLRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDSL-R 480
P + L L +L +S N L LPRG G+ L +LD+ N L +P I + L R
Sbjct: 316 PEDIQWLVNLEVLILSNNLLKKLPRGIGALRKLRVLDIEENKLES--IPTEIGIFEILIR 373
Query: 481 ALYLG 495
++ G
Sbjct: 374 PVFAG 378
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +3
Query: 513 LPPEIGNLKNLQILSMRENDLIEVPRELGQLARLRELHLQ 632
LP +I L NL++L + N L ++PR +G L +LR L ++
Sbjct: 315 LPEDIQWLVNLEVLILSNNLLKKLPRGIGALRKLRVLDIE 354
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/69 (33%), Positives = 34/69 (49%)
Frame = +1
Query: 304 PVSLSSLPKLRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDSLRA 483
P+ S L LNV+ N++ LP LE+L L+ NNL +K LP + LR
Sbjct: 293 PLDFGSWISLVELNVATNQISKLPEDIQWLVNLEVLILS-NNLLKK-LPRGIGALRKLRV 350
Query: 484 LYLGDNDFD 510
L + +N +
Sbjct: 351 LDIEENKLE 359
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = +1
Query: 340 LNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDSLRALYLGDN 501
LNV N+L +LP FGS+ L L++ N +++ LP + + +L L L +N
Sbjct: 282 LNVKDNQLTSLPLDFGSWISLVELNVATNQISK--LPEDIQWLVNLEVLILSNN 333
>SB_5807| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 250
Score = 33.5 bits (73), Expect = 0.15
Identities = 25/63 (39%), Positives = 32/63 (50%)
Frame = +1
Query: 313 LSSLPKLRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDSLRALYL 492
+S L KL N L LP+ FGS LE L+L+ N L E P + F + L+ L L
Sbjct: 81 ISELDKLLTFIGRNNNLDELPKEFGSLAKLEKLNLSGNRL-ESFGP-SIFRLTQLKVLLL 138
Query: 493 GDN 501
G N
Sbjct: 139 GGN 141
>SB_45576| Best HMM Match : LRR_1 (HMM E-Value=2.7e-14)
Length = 829
Score = 33.1 bits (72), Expect = 0.19
Identities = 20/60 (33%), Positives = 34/60 (56%)
Frame = +1
Query: 322 LPKLRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDSLRALYLGDN 501
L L L+++ NKL ++P G + L L+L NN++ V+P + M L+ L+L +N
Sbjct: 544 LESLEKLDLNNNKLTSIPAGITNLTKLTNLNLENNNIS--VVPKYVWQMGCLKVLFLSNN 601
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/34 (38%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +2
Query: 155 SLEEIPGL-FSLENITRLXLSHNKISVVPAALAN 253
+L IP + F LE++ +L L++NK++ +PA + N
Sbjct: 533 NLTSIPDVVFHLESLEKLDLNNNKLTSIPAGITN 566
>SB_51944| Best HMM Match : LRR_1 (HMM E-Value=7.7e-34)
Length = 409
Score = 32.7 bits (71), Expect = 0.26
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Frame = +1
Query: 304 PVSLSSLPKLRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDSLRA 483
P S++ L KL++L + N L ++P LEIL+++ NN+ L ++ +L
Sbjct: 212 PPSITKLEKLQVLYLQENALDSVPAQVYGIQSLEILNISSNNITS--LSDEIRLLRNLVE 269
Query: 484 LYLGDND-----FDFYHLK 525
L L N+ +DF+ LK
Sbjct: 270 LNLNKNNIQELPYDFHLLK 288
Score = 31.5 bits (68), Expect = 0.59
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3
Query: 513 LPPEIGNLKNLQILSMRENDLIEVPRELGQLARLRELHL 629
LPP I L+ LQ+L ++EN L VP ++ + L L++
Sbjct: 211 LPPSITKLEKLQVLYLQENALDSVPAQVYGIQSLEILNI 249
Score = 31.5 bits (68), Expect = 0.59
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Frame = +1
Query: 304 PVSLSSLPKLRILNVSLNKLYNLP----RGFGSFPVLEILDLTYNNLNEKVLPGNFFIMD 471
P S+ LP LR L++S+NK+ +LP G L LD++ N + LP + M+
Sbjct: 304 PESICKLP-LRELDLSINKISSLPDFVRASIGDMSTLVELDISSNKIT--ALPKSIGKME 360
Query: 472 SLRALYLGDNDFDFYHLKL-EI*RIYKFC 555
L L N D + L ++ + K C
Sbjct: 361 RLEILRAESNPLDEVPVSLADLRELRKLC 389
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 513 LPPEIGNLKNLQILSMRENDLIEVPRELGQLARLRELHLQG 635
LP + L LSM NDL+ P E+ +L+ L L L G
Sbjct: 142 LPDWFASFHCLAYLSMENNDLVCFPGEISKLSSLEVLILSG 182
>SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13)
Length = 337
Score = 31.9 bits (69), Expect = 0.45
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 513 LPPEI-GNLKNLQILSMRENDLIEVPRELGQLARLRELHLQG 635
LP E L NL L +R+N L +P +G+ RL+ L LQG
Sbjct: 119 LPEEFFRKLINLVWLDLRDNQLENLPNSIGEHGRLKTLLLQG 160
>SB_21029| Best HMM Match : PX (HMM E-Value=9.1e-15)
Length = 1466
Score = 31.9 bits (69), Expect = 0.45
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +2
Query: 122 PEIDLVDKGISSLEEIPGLFSLENITRLXLSHNKISVVPAAL 247
P I+ ++ + +EEI L SL + L LSHNK+ +P L
Sbjct: 970 PNIESLNWSHNCIEEINHLESLSELEVLDLSHNKLRAIPTNL 1011
>SB_7052| Best HMM Match : LRR_1 (HMM E-Value=2e-12)
Length = 1328
Score = 31.9 bits (69), Expect = 0.45
Identities = 21/71 (29%), Positives = 31/71 (43%)
Frame = +1
Query: 304 PVSLSSLPKLRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDSLRA 483
P+ ++PKL +N+S N+ P L+ LDL+YN L P + L
Sbjct: 990 PLLHEAMPKLEHMNLSHNEFETFPYCLVKCKRLKSLDLSYNKLTNSPPPLSISASILLED 1049
Query: 484 LYLGDNDFDFY 516
L L N D +
Sbjct: 1050 LSLAHNVLDSF 1060
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 31.5 bits (68), Expect = 0.59
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +1
Query: 319 SLPKLRILNVSLNKLYNLPRG-FGSFPVLEILDLTYNNLNEKVLPGNFFI-MDSLRALYL 492
+L LR LN+ N+L LPR F L LDL+ N L+ LP + F + SL+ L+L
Sbjct: 90 NLTALRSLNLGANRLSVLPRSVFRDLASLRSLDLSANRLSS--LPEDTFEGLSSLQDLFL 147
Query: 493 GDN 501
N
Sbjct: 148 DFN 150
Score = 27.9 bits (59), Expect = 7.3
Identities = 22/64 (34%), Positives = 36/64 (56%)
Frame = +1
Query: 313 LSSLPKLRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDSLRALYL 492
L++L +LR+ N +L K ++ G+ L+ L L NNL ++ PG F + L LYL
Sbjct: 163 LAALQRLRLHNNNL-KTFSERTLQGTLS-LKSLQLN-NNLLTRIEPGTFRNLRGLEILYL 219
Query: 493 GDND 504
+N+
Sbjct: 220 NNNN 223
>SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19)
Length = 811
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 400 LEILDLTYNNLNEKVLPGNFFIMDSLRALYLGD 498
L +DL+ N+L+ LP FF + L+ LYL D
Sbjct: 77 LSDIDLSSNDLSLNGLPNEFFQLPKLKQLYLND 109
>SB_51703| Best HMM Match : LRR_1 (HMM E-Value=1.9e-06)
Length = 632
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +1
Query: 310 SLSSLPKLRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPG-NFFIMDSLRAL 486
+L +LPKLR L + N L F V+ +D +Y +L +++PG +++DS+RAL
Sbjct: 226 TLKTLPKLRNLVMQGNPLAVTVTVAAKFLVVIHIDNSYGDL--QLVPGYRGYVIDSIRAL 283
Query: 487 YLGDN 501
+ D+
Sbjct: 284 TILDD 288
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/64 (34%), Positives = 32/64 (50%)
Frame = +1
Query: 310 SLSSLPKLRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDSLRALY 489
S+ L +L L++ NKL +P G L+ LDL+ N L + LP + L+ LY
Sbjct: 389 SIVDLDRLCRLDLQKNKLRKIPSGLLKMTCLKYLDLSDNELTD--LPRKEW-SPVLKTLY 445
Query: 490 LGDN 501
L N
Sbjct: 446 LSGN 449
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +1
Query: 304 PVSLSSLPKLRILNVSLNKLYNLPRGFGSFPVLEILDLTYNN 429
P S++S KL L ++ N+LY +P LEILDL+ NN
Sbjct: 455 PDSMASA-KLVNLYLARNRLYEVPACVCELLTLEILDLSDNN 495
>SB_13921| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 688
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +3
Query: 534 LKNLQILSMRENDLIEVPRELGQLARLRELHLQG 635
L NL+ L +R N + EVP LG L+ L L+G
Sbjct: 63 LPNLKWLDLRNNHINEVPENLGAHRCLKNLLLEG 96
>SB_19634| Best HMM Match : LRR_1 (HMM E-Value=2.6e-17)
Length = 267
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 543 LQILSMRENDLIEVPRELGQLARLRELHLQG 635
L+ L ++ N++ +VP ELG + L+ L L G
Sbjct: 209 LETLDLQNNNISQVPPELGNVRGLKALQLGG 239
>SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20)
Length = 1243
Score = 28.3 bits (60), Expect = 5.5
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 313 LSSLPKLRILNVSLNKLYNLPRGFG-SFPVLEILDLTYNNLNEKVLPGNFFIMDSLRALY 489
L++LP L L+VS N L +LP SF LE L NNL + + F + +L L
Sbjct: 362 LNTLPLLEELDVSNNNLVSLPEVSNLSFMSLEKLFAQRNNLT--WVSSSLFQLKTLNKLN 419
Query: 490 LGDN 501
L N
Sbjct: 420 LSHN 423
>SB_8473| Best HMM Match : Transgly (HMM E-Value=2e-19)
Length = 318
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -1
Query: 422 YVRSNISSTGKE-PKPLGKLYSLFNETLRI 336
Y+R + KE PKP GKLY ++ + L+I
Sbjct: 162 YLRGYLKQWVKEHPKPDGKLYDIYRDGLKI 191
>SB_29723| Best HMM Match : EGF_2 (HMM E-Value=0.55)
Length = 319
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 313 LSSLPKLRILNVSLNKLYNLPRGFGSFPVLEILDLTYNN 429
L L L + + +L+ +++ P+ FPV+ DL YNN
Sbjct: 96 LKLLVYLSLSSTTLHGVFSPPQPTAEFPVILFSDLNYNN 134
>SB_19790| Best HMM Match : LRR_1 (HMM E-Value=0.00028)
Length = 74
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 340 LNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNE 438
L++S NK+ LP+ G LEIL N L+E
Sbjct: 7 LDISSNKITALPKSIGKMERLEILRAESNPLDE 39
>SB_16901| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 909
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -3
Query: 183 ENKPGISSRLDIPLSTKSISGLFISLASSITFLAFDILPV 64
+NK GISS + L S+ + +A+ +FL D++P+
Sbjct: 661 DNKNGISSSTALLLLKSSLESIQPDMAAYGSFLQLDLIPI 700
>SB_47473| Best HMM Match : LRR_1 (HMM E-Value=2.8e-10)
Length = 658
Score = 27.5 bits (58), Expect = 9.7
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 313 LSSLPKLRILNVSLNKLYNLPRG-FGSFPVLEILDLTYNNLNEKVLPGNFFIMDSLRALY 489
+SS + L V+ + + + G F F L L LT+NN++ + F ++ L L
Sbjct: 64 ISSTENITELTVASSNISTITGGVFAGFTALRNLSLTFNNIH-TIRARGFAGLNKLEYLN 122
Query: 490 LGDN 501
+ DN
Sbjct: 123 MSDN 126
>SB_19622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 862
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 513 LPPEIGNLKNLQILSMRENDLIEVPRELGQLARLRELHLQ 632
+P +I L NL+ L++ N + ++ +LREL L+
Sbjct: 500 IPAQIEELSNLETLNLASNKITSGQEHTWKMGQLRELSLR 539
>SB_14633| Best HMM Match : LRR_1 (HMM E-Value=3.4e-12)
Length = 446
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +1
Query: 340 LNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDSL 477
L+V NKL N+ + L +++ N L +PG+ F ++ L
Sbjct: 3 LSVKENKLNNIHGDLSTLKHLRVINARNNELKNSGIPGDIFGLEDL 48
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,131,872
Number of Sequences: 59808
Number of extensions: 342325
Number of successful extensions: 863
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1596754500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -