Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20286
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   3.1  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   4.1  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   5.4  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   7.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   7.2  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   9.5  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   9.5  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/34 (32%), Positives = 14/34 (41%)
 Frame = -1

Query: 184 TESSRAQTLH*PCPRPVQSPSPRWCRSCQYYWCQ 83
           T S    T   P PR  +S  P+W   C    C+
Sbjct: 33  TTSKLLYTYRQPYPRQKKSHPPQWTWQCINQRCE 66


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 264 ADGSVRMFDLRHLEHSTIIYEDPQ 335
           A GS+    +  L H+  IY DP+
Sbjct: 398 AKGSIVNLHIYDLHHNPAIYPDPE 421


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 4/26 (15%)
 Frame = +2

Query: 188 SLMIRKCT----T*RSVGPAGGEICS 253
           +L+  KC     T R  G AGG++CS
Sbjct: 90  ALIFEKCELATCTPREPGVAGGDVCS 115


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 590 PILAYTAAEGEVNQIQWGAT 649
           P  +Y A E    Q+QW AT
Sbjct: 162 PSSSYPANEISCPQVQWSAT 181


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 561 MSQIRAWWSSPAVQM 517
           +S +R +W SPAV M
Sbjct: 300 ISFLRGFWLSPAVDM 314


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 135 SSLQAPDGAGRVNTTGAN 82
           S+L++PD A R +  G+N
Sbjct: 226 SALESPDPASRSSCLGSN 243


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/33 (24%), Positives = 12/33 (36%)
 Frame = +2

Query: 455 QAQQPQGVRQRHRLGAAQSCHICTAGDDHQALI 553
           Q    Q +           CH  +   DHQA++
Sbjct: 315 QQHHQQNMSHEELSAMVNRCHPLSLSSDHQAML 347


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,707
Number of Sequences: 336
Number of extensions: 3575
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)