Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20286
(688 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0322 - 27926619-27927686 119 2e-27
02_04_0044 - 19198001-19199236 110 1e-24
02_02_0241 - 8204430-8205398 50 1e-06
11_01_0204 - 1612505-1612636,1612809-1612926,1613050-1613162,161... 34 0.092
02_01_0283 + 1903869-1904786 33 0.16
08_02_0130 - 12900202-12900277,12901457-12901536,12901654-129017... 33 0.21
12_01_0207 - 1559491-1559544,1559806-1560161,1560244-1560363,156... 33 0.28
03_05_0448 - 24426509-24426737,24427306-24427401,24427723-244278... 33 0.28
01_07_0014 - 40455673-40455723,40455815-40455892,40455987-404560... 33 0.28
12_01_0063 - 535364-536085,536226-536439,536989-537981,538238-53... 31 0.65
06_03_0175 + 17553447-17553667,17555313-17555467,17555625-175557... 31 0.65
01_07_0350 + 42941976-42942401,42942510-42942737,42943201-429433... 31 0.65
11_01_0061 - 456521-457389,457534-457659,458377-459307,459564-45... 31 1.1
07_03_1546 + 27602598-27602917,27602995-27603052,27603130-276032... 30 1.5
02_02_0528 + 11199799-11200470,11201850-11201951,11202858-112034... 30 1.5
03_06_0560 + 34726338-34727243 30 2.0
02_05_0890 - 32546918-32547088,32547224-32547334,32547705-325478... 30 2.0
07_01_0853 + 6982185-6983593,6985926-6986497,6987139-6988439 29 4.6
03_01_0161 + 1307206-1307769,1307979-1308101,1308182-1308286,130... 29 4.6
02_02_0277 + 8489717-8491468,8491571-8491610,8491719-8491841,849... 29 4.6
06_03_0449 + 20907491-20910146,20910313-20910782 28 6.0
08_01_0058 + 388989-389102,389226-389337,389457-389483,389787-38... 28 8.0
03_02_0099 - 5614007-5614233,5614725-5614998,5615086-5616179,561... 28 8.0
02_05_0822 + 32025992-32026696,32027237-32027314,32027547-320277... 28 8.0
02_01_0627 + 4708648-4708836,4708975-4709064,4709579-4709664,471... 28 8.0
>02_05_0322 - 27926619-27927686
Length = 355
Score = 119 bits (287), Expect = 2e-27
Identities = 56/100 (56%), Positives = 70/100 (70%), Gaps = 1/100 (1%)
Frame = +3
Query: 213 HSVQ*GRRGARYVRSVGADGSVRMFDLRHLEHSTIIYEDPQ-HTPLLRLAWNKQDPNYLA 389
H + G G SV ADGSVR+FDLR EHSTI YE P+ TPLLRLAWN+ D +Y+A
Sbjct: 190 HDIAWGENGI--FASVSADGSVRVFDLRDKEHSTIFYESPRPDTPLLRLAWNRYDFHYMA 247
Query: 390 TIAMDACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHS 509
T+ MD+ V++LD+R P PVA L+ HRAC N +AWAP +
Sbjct: 248 TLLMDSSAVVVLDMRAPGVPVAELHRHRACANAVAWAPQA 287
Score = 85.8 bits (203), Expect = 3e-17
Identities = 42/70 (60%), Positives = 49/70 (70%)
Frame = +1
Query: 25 SDFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWGLETGQVLGRVNEVSGHVKTQLIAHDKE 204
S+FCAPLTSFDWNE +P IGT+SIDTTCTIW +E G V+TQLIAHDK
Sbjct: 140 SEFCAPLTSFDWNEAEPRRIGTASIDTTCTIWDIERGV-----------VETQLIAHDKA 188
Query: 205 VYDIAFSRAG 234
V+DIA+ G
Sbjct: 189 VHDIAWGENG 198
Score = 65.3 bits (152), Expect = 4e-11
Identities = 27/58 (46%), Positives = 39/58 (67%), Gaps = 4/58 (6%)
Frame = +2
Query: 515 HICTAGDDHQALIWDIQQMPRAIE----DPILAYTAAEGEVNQIQWGATQPDWIAICY 676
H+C+AGDD QALIW++ P A+ DP++ Y A E+NQ+QW A P+WI+I +
Sbjct: 290 HLCSAGDDGQALIWELPATPGAVPAEGIDPVMVYDAG-AEINQLQWAAAYPEWISIAF 346
>02_04_0044 - 19198001-19199236
Length = 411
Score = 110 bits (264), Expect = 1e-24
Identities = 57/106 (53%), Positives = 67/106 (63%), Gaps = 15/106 (14%)
Frame = +3
Query: 237 GARYVRSVGADGSVRMFDLRHLEHSTIIYED---------------PQHTPLLRLAWNKQ 371
GA SV ADGSVR+FDLR EHSTIIYE TPL+RL WNKQ
Sbjct: 223 GAGVFASVSADGSVRVFDLRDKEHSTIIYESGSGGSSNSAGADGGAASPTPLVRLGWNKQ 282
Query: 372 DPNYLATIAMDACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHS 509
DP Y+ATI MD+ +V++LD+R P PV L+ H + VN IAWAPHS
Sbjct: 283 DPRYMATIIMDSPKVVVLDIRYPTLPVVELHRHHSPVNAIAWAPHS 328
Score = 96.3 bits (229), Expect = 2e-20
Identities = 47/75 (62%), Positives = 52/75 (69%)
Frame = +1
Query: 10 NNNKNSDFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWGLETGQVLGRVNEVSGHVKTQLI 189
N N+NSD+C PLTSFDWN+ DP IGTSSIDTTCTIW +E V TQLI
Sbjct: 162 NGNRNSDYCGPLTSFDWNDADPRRIGTSSIDTTCTIWDVEREA-----------VDTQLI 210
Query: 190 AHDKEVYDIAFSRAG 234
AHDKEVYDIA+ AG
Sbjct: 211 AHDKEVYDIAWGGAG 225
Score = 70.5 bits (165), Expect = 1e-12
Identities = 39/76 (51%), Positives = 45/76 (59%), Gaps = 19/76 (25%)
Frame = +2
Query: 509 SCHICTAGDDHQALIWDIQQM----------------PRAIE---DPILAYTAAEGEVNQ 631
SCHICTAGDD QALIWD+ M A E DPILAYTA E+ Q
Sbjct: 329 SCHICTAGDDSQALIWDLSSMGTGSNNGGNGNGNAAAAAAAEGGLDPILAYTAG-AEIEQ 387
Query: 632 IQWGATQPDWIAICYN 679
+QW ATQPDW+AI ++
Sbjct: 388 LQWSATQPDWVAIAFS 403
>02_02_0241 - 8204430-8205398
Length = 322
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +3
Query: 255 SVGADGSVRMFDLRHLEHSTIIYEDPQHT-PLLRLAWNKQDPNYLATIAMDACEVIILDV 431
S D + R++D+R + +I P H +L L W+K DP+ LAT ++D + + DV
Sbjct: 172 SASGDRTARVWDVREPAPTLVI---PAHDHEVLSLDWDKYDPSILATGSVDK-SIRVWDV 227
Query: 432 RVPCTPVARLNNHRACVNGIAWAPH 506
R P P+A+L H V + ++PH
Sbjct: 228 RAPRAPLAQLAGHGYAVKRVKFSPH 252
Score = 32.7 bits (71), Expect = 0.28
Identities = 11/41 (26%), Positives = 25/41 (60%)
Frame = +1
Query: 49 SFDWNEVDPNLIGTSSIDTTCTIWGLETGQVLGRVNEVSGH 171
S DW++ DP+++ T S+D + +W + + + +++GH
Sbjct: 202 SLDWDKYDPSILATGSVDKSIRVWDVRAPR--APLAQLAGH 240
>11_01_0204 -
1612505-1612636,1612809-1612926,1613050-1613162,
1613640-1613712,1613797-1613936,1614059-1614129,
1614262-1614430,1614625-1614690,1615081-1615179,
1615298-1615471,1615745-1615823,1615929-1616035,
1616395-1616439
Length = 461
Score = 34.3 bits (75), Expect = 0.092
Identities = 21/80 (26%), Positives = 32/80 (40%)
Frame = +1
Query: 40 PLTSFDWNEVDPNLIGTSSIDTTCTIWGLETGQVLGRVNEVSGHVKTQLIAHDKEVYDIA 219
P+TS +W+ +P+ + SS D TIW L + E ++ Q A + +
Sbjct: 355 PITSVEWSPHEPSTLAVSSADHQLTIWDLSLEKDAEEEAEFRARMREQADAPEDLPPQLL 414
Query: 220 FSRAGGGRDMFAPWAPTDPS 279
F G W P PS
Sbjct: 415 FVHQGQKDLKELHWHPQIPS 434
>02_01_0283 + 1903869-1904786
Length = 305
Score = 33.5 bits (73), Expect = 0.16
Identities = 24/105 (22%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Frame = +3
Query: 207 VRHSVQ*GRRGARYVRSVGADGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAW-NKQDPNY 383
V H + G R + + +D ++++ + H + P+ ++AW + + +
Sbjct: 13 VVHDIAMDYYGKR-IATASSDNTIKIIGVSGNSHQQLATLSGHQGPVWQVAWAHPKYGSL 71
Query: 384 LATIAMDACEVIILDVRVP--CTPVARLNNHRACVNGIAWAPHSL 512
LA+ + D +I + P H++ VN IAWAPH L
Sbjct: 72 LASCSYDGRVIIWKEGSKPDEWAQAHTFIEHKSSVNSIAWAPHEL 116
>08_02_0130 -
12900202-12900277,12901457-12901536,12901654-12901740,
12902475-12902636,12904766-12904855,12904959-12905078,
12905671-12905798,12905873-12906272
Length = 380
Score = 33.1 bits (72), Expect = 0.21
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1
Query: 58 WNEVDPNLIGTSSIDTTCTIWGLETGQVLGRVNEVSGHVKT 180
W ++ +I T+ D T IW ETGQ L ++ GH KT
Sbjct: 154 WGPLNRTII-TAGEDATIRIWDTETGQCLKESDKEQGHQKT 193
>12_01_0207 -
1559491-1559544,1559806-1560161,1560244-1560363,
1561523-1561568,1561741-1561858,1561981-1562093,
1562586-1562658,1562743-1562882,1563005-1563075,
1563228-1563396,1563594-1563659,1564052-1564150,
1564271-1564444,1564720-1564798,1564901-1565007,
1565391-1565435
Length = 609
Score = 32.7 bits (71), Expect = 0.28
Identities = 20/79 (25%), Positives = 31/79 (39%)
Frame = +1
Query: 40 PLTSFDWNEVDPNLIGTSSIDTTCTIWGLETGQVLGRVNEVSGHVKTQLIAHDKEVYDIA 219
P+TS +W+ +P+ + SS D TIW L + E ++ Q A + +
Sbjct: 355 PITSVEWSPHEPSTLAVSSADHQLTIWDLSLEKDAEEEAEFRARMREQADAPEDLPPQLL 414
Query: 220 FSRAGGGRDMFAPWAPTDP 276
F G W P P
Sbjct: 415 FVHQGQKDLKELHWHPQIP 433
>03_05_0448 -
24426509-24426737,24427306-24427401,24427723-24427847,
24428694-24428846,24429921-24430247,24431415-24431630,
24431768-24432112,24433897-24434253
Length = 615
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +2
Query: 524 TAGDDHQALIWDIQQMPRAIEDPILAYTAAEGEVNQIQWGATQPDWI 664
+ GDDH LIWD++ P + + P+ + A +GEVN + + +W+
Sbjct: 436 SVGDDHNLLIWDLRS-PVSTK-PVQSVAAHQGEVNCLAFNPFN-EWV 479
>01_07_0014 -
40455673-40455723,40455815-40455892,40455987-40456049,
40456250-40456390,40456851-40456949,40457403-40457477,
40457556-40457652,40457738-40457805,40458456-40458512,
40458613-40458671,40458798-40458921,40459208-40459264,
40459378-40459457,40459585-40459793,40459868-40459986
Length = 458
Score = 32.7 bits (71), Expect = 0.28
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +3
Query: 321 YEDPQH-TPLLRLAWNKQDPNYLATIAMDACEVIILDVRVPCTPVARLNNHRACVNGIAW 497
Y+ H + +L LAWNK+ N LA+ + D V I DV V V L +H V +AW
Sbjct: 239 YKKGSHRSSVLGLAWNKEVRNVLASASADK-TVKIWDVSVGKCAVT-LEHHDDKVQSVAW 296
Query: 498 APHS 509
+ S
Sbjct: 297 SRQS 300
>12_01_0063 - 535364-536085,536226-536439,536989-537981,538238-538255,
538601-538860,539950-540073,540978-541310,541447-541531,
541683-541768,541843-541941,542041-542180,542717-543043,
543163-543774,543887-543971,543972-544067,544147-544500,
544536-544559,544597-544707,544811-544894,545468-545546,
546122-546279,546412-546528,546622-546780,546857-546939,
547525-547627,549184-549495
Length = 1925
Score = 31.5 bits (68), Expect = 0.65
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Frame = +3
Query: 267 DGSVRMFDLRHLEHSTIIYEDPQHTP----LLRLAWNKQDPNYLATIAMDACEVIILDVR 434
D SVR+FD+R + ++Y H P ++ + + Y A A ++ LDVR
Sbjct: 997 DASVRIFDVRTPDR--LVYTARPHAPRSEKVVGIGFQPGFDPYKIVSASQAGDIQFLDVR 1054
Query: 435 VPCTPVARLNNHRACVNGIAWAPHSLVTSA 524
P + HR + +A H+ V ++
Sbjct: 1055 RASEPYLTIEAHRGSLTALAVHRHAPVIAS 1084
>06_03_0175 +
17553447-17553667,17555313-17555467,17555625-17555713,
17556253-17556376,17556920-17556989,17557345-17557441,
17559365-17559427,17559504-17559581,17559675-17559737
Length = 319
Score = 31.5 bits (68), Expect = 0.65
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 43 LTSFDWNEVDPNLIGTSSIDTTCTIWGLETGQVLGRVNEVSGHVK 177
L DWN+ N++ ++S D T IW + G+ + + VK
Sbjct: 210 LIGIDWNKEYTNILASASADKTVKIWDVAAGKCVTTLEHHDAKVK 254
>01_07_0350 +
42941976-42942401,42942510-42942737,42943201-42943380,
42943515-42943730,42943854-42943955,42944377-42944439,
42944526-42944594,42945662-42945730,42947003-42947069,
42947449-42947514,42947600-42947697,42947820-42947857,
42947929-42948016,42948101-42948373,42948470-42948535,
42948624-42948779
Length = 734
Score = 31.5 bits (68), Expect = 0.65
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 447 PVARLNNHRACVNGIAWAPH 506
P+ RL H A V IAW+PH
Sbjct: 310 PILRLTEHTAAVKAIAWSPH 329
>11_01_0061 - 456521-457389,457534-457659,458377-459307,459564-459581,
459924-460183,461834-461918,462587-462919,463053-463137,
463289-463374,463455-463556,463656-463795,464332-464658,
464778-465389,465502-465586,465587-465682,465762-466115,
466212-466322,466426-466509,467086-467164,467742-467899,
468034-468150,468240-468398,468475-468557,469098-469200,
470784-471080
Length = 1899
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Frame = +3
Query: 267 DGSVRMFDLRHLEHSTIIYEDPQHTP----LLRLAWNKQDPNYLATIAMDACEVIILDVR 434
D SVR+FD+R + ++Y H P ++ + + Y A A ++ LDVR
Sbjct: 985 DASVRIFDVRTPDR--LVYTARPHAPRSEKVVGIGFQPGFDPYKIVSASQAGDIQFLDVR 1042
Query: 435 VPCTPVARLNNHRACVNGIAWAPHSLVTSA 524
P + HR + +A H+ V ++
Sbjct: 1043 RASEPYLTIEAHRGSLMALAVHRHAPVIAS 1072
>07_03_1546 +
27602598-27602917,27602995-27603052,27603130-27603252,
27603896-27603992,27604095-27604131,27604244-27604349,
27604547-27604604,27604705-27604802,27604911-27605030,
27605622-27605667,27606336-27606522,27606747-27607263,
27607361-27607453,27608101-27608286,27608364-27608574,
27609263-27609387,27609518-27609664,27610114-27610236,
27610445-27610799,27611076-27611305,27611785-27611877
Length = 1109
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Frame = +3
Query: 255 SVGADGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLATIAMD--ACEVIILD 428
+ ++G ++DLR+ + T + D T L WN L + D + + + D
Sbjct: 192 TASSNGMTVVWDLRNQKPLTS-FSDSNRTKCSVLQWNPDMSTQLIVASDDDNSPSLRVWD 250
Query: 429 VRVPCTPVARLNNHRACVNGIAWAPH 506
VR +PV H V ++W P+
Sbjct: 251 VRKTISPVREFVGHSKGVIAMSWCPY 276
>02_02_0528 +
11199799-11200470,11201850-11201951,11202858-11203487,
11204287-11204547
Length = 554
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 58 WNEVDPNLIGTSSIDTTCTIWGLE 129
WN +P+++ ++S D T IWGL+
Sbjct: 495 WNPANPHMLASASDDHTIRIWGLK 518
>03_06_0560 + 34726338-34727243
Length = 301
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +3
Query: 342 PLLRLAW-NKQDPNYLATIAMDACEVIILDVRVPCTPVARL-NNHRACVNGIAWAPHSL 512
P+ R+AW + + + LA+ D V+ + A + +NH++ +N IAWAP+ L
Sbjct: 59 PVWRVAWAHPKFGSILASCGYDGRVVVWKEGAAGQWSQAHVFDNHKSSLNSIAWAPYEL 117
>02_05_0890 -
32546918-32547088,32547224-32547334,32547705-32547884,
32547960-32548064,32548333-32548431,32548524-32548679,
32548772-32548850,32549213-32549278,32549382-32549536,
32549675-32550034,32550150-32550305,32550779-32550856,
32551471-32551812
Length = 685
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +1
Query: 43 LTSFDWNEVDPNLIGTSSIDTTCTIWGLETGQVLGRVNEVSGHVKTQLIAHDKEVYDIAF 222
L+ WN+ N+I +S + T+W ++T Q + E H+K + + F
Sbjct: 433 LSCLSWNKYSKNVIASSDYEGIVTVWDVQTRQSVMEYEE-----------HEKRAWSVDF 481
Query: 223 SR 228
SR
Sbjct: 482 SR 483
>07_01_0853 + 6982185-6983593,6985926-6986497,6987139-6988439
Length = 1093
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +2
Query: 485 RHRLGAAQSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAEGEVNQIQWGATQP 655
R+ + H+ TAGDD WD+ E P+ A AA + I+ GA P
Sbjct: 142 RYPVAGGDKVHLFTAGDDALLAYWDVPS-----ETPVFAAPAAHRD--YIRAGAASP 191
>03_01_0161 +
1307206-1307769,1307979-1308101,1308182-1308286,
1308688-1308867,1308988-1309050,1309151-1309345,
1309704-1309805,1309885-1309947,1310045-1310113,
1310215-1310270,1310587-1310755
Length = 562
Score = 28.7 bits (61), Expect = 4.6
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 447 PVARLNNHRACVNGIAWAPH 506
PV + H A V IAW+PH
Sbjct: 356 PVLKYTEHTAAVKAIAWSPH 375
>02_02_0277 +
8489717-8491468,8491571-8491610,8491719-8491841,
8491959-8492014
Length = 656
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = -3
Query: 479 ARPVVVEPGHRGAGHAHVQYDHLARVHGDGGQVVRVLLVPGQAEQRGVLGVLI 321
A PVVV P G+AH Q+ V GQV ++ QRG L V +
Sbjct: 194 ALPVVVPPPQLPVGYAHSQFALADPVTPIPGQVAGAIVPVRSVMQRGPLTVSV 246
>06_03_0449 + 20907491-20910146,20910313-20910782
Length = 1041
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Frame = -2
Query: 243 SPPAGPTERYVVHFLIMSDQLSLHVPR----HFIDPAQDLSSLQAPDGAGR 103
+PPA P+ + V+H LI D++S P ++D A L L+A G+ R
Sbjct: 969 NPPARPSMKEVLHHLIRCDRMSAQGPEACQLDYVDGAAPL--LEAKKGSRR 1017
>08_01_0058 +
388989-389102,389226-389337,389457-389483,389787-389859,
389958-390061,390144-390358,390429-390528,390739-390805,
391628-391716,391810-391948,392057-392157,392921-393088,
393302-393510
Length = 505
Score = 27.9 bits (59), Expect = 8.0
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +3
Query: 336 HTPLLRLAWNKQDPNYLATIAMDACEVIILDVRVPCTPVARLNNHRACVNGIAWAP-HSL 512
H +L L W+ QD +L + ++D I+ D + + +L H V G+AW P
Sbjct: 112 HKDVLDLQWS-QDGAFLVSASVDN-SCIVWDA-IKGSVQQKLEGHLHYVQGVAWDPLGQY 168
Query: 513 VTSAPPETTTRL 548
+ S + T R+
Sbjct: 169 IASLSSDRTCRI 180
>03_02_0099 -
5614007-5614233,5614725-5614998,5615086-5616179,
5616674-5616772,5617371-5617389
Length = 570
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +1
Query: 22 NSDFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWGLETGQVLGRV 153
+ D AP+TS W++ +L+ S+ D + T+W + + + R+
Sbjct: 63 DKDCTAPITSVAWSKYGHHLL-ASATDKSLTLWHVVNEKKIARI 105
>02_05_0822 +
32025992-32026696,32027237-32027314,32027547-32027713,
32027811-32027885,32028624-32028742,32028908-32029204,
32029275-32029362,32029467-32029572,32029727-32029837,
32030520-32030683,32031237-32031357,32031958-32032182,
32032267-32032457,32032658-32032825,32032911-32033016,
32033301-32033438,32033533-32033697,32033777-32033980,
32034341-32034535,32034603-32034674,32034797-32034949
Length = 1215
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 455 GHRGAGHAHVQYDHLARVHGDGG 387
GH GA H+H + D L V G GG
Sbjct: 4 GHGGAVHSHDRIDALRAVRGAGG 26
>02_01_0627 +
4708648-4708836,4708975-4709064,4709579-4709664,
4710108-4710332,4711251-4711314,4711793-4712491,
4712657-4712764,4712920-4713051,4713183-4713359,
4713920-4713973,4714072-4714134,4714227-4714928,
4715048-4715175,4715563-4715839
Length = 997
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 315 IIYEDPQHTPLLRLAWNKQDPNYL 386
II+EDP+H+ LA+ +PN+L
Sbjct: 841 IIFEDPEHSSTYCLAFRVVNPNHL 864
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,045,334
Number of Sequences: 37544
Number of extensions: 496365
Number of successful extensions: 1727
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1719
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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