Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20286
(688 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79756-4|CAB02116.2| 478|Caenorhabditis elegans Hypothetical pr... 146 2e-35
Z79756-5|CAB02115.1| 388|Caenorhabditis elegans Hypothetical pr... 124 8e-29
Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 38 0.009
Z49127-9|CAA88948.1| 340|Caenorhabditis elegans Hypothetical pr... 34 0.083
X17497-1|CAA35532.1| 340|Caenorhabditis elegans G-protein protein. 34 0.083
AF291846-1|AAK55963.1| 340|Caenorhabditis elegans heterotrimeri... 34 0.083
Z71263-5|CAA95824.1| 356|Caenorhabditis elegans Hypothetical pr... 34 0.11
AF291847-1|AAK55964.1| 356|Caenorhabditis elegans heterotrimeri... 34 0.11
Z31590-4|CAD27606.1| 495|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z31590-3|CAD27605.1| 607|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z31590-2|CAD27604.1| 538|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z31590-1|CAA83461.1| 605|Caenorhabditis elegans Hypothetical pr... 33 0.19
AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical ... 31 1.0
AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical ... 31 1.0
AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical ... 31 1.0
Z82274-8|CAB05230.3| 467|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical p... 29 3.1
AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical ... 29 3.1
AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic mul... 29 3.1
U29488-11|AAK93842.1| 753|Caenorhabditis elegans Hypothetical p... 28 5.4
Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z47358-8|CAA87433.1| 702|Caenorhabditis elegans Hypothetical pr... 28 7.2
U76402-1|AAB39734.1| 777|Caenorhabditis elegans degenerin protein. 28 7.2
U40798-3|AAA81473.2| 777|Caenorhabditis elegans Uncoordinated p... 28 7.2
AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein. 28 7.2
AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical ... 28 7.2
Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z81486-5|CAB03987.1| 570|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z81109-17|CAB03241.2| 497|Caenorhabditis elegans Hypothetical p... 27 9.5
U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein ... 27 9.5
U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein ... 27 9.5
AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein. 27 9.5
AC024753-2|AAF60457.2| 561|Caenorhabditis elegans Hypothetical ... 27 9.5
>Z79756-4|CAB02116.2| 478|Caenorhabditis elegans Hypothetical
protein F53C11.7 protein.
Length = 478
Score = 146 bits (353), Expect = 2e-35
Identities = 63/93 (67%), Positives = 76/93 (81%)
Frame = +3
Query: 231 RRGARYVRSVGADGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLATIAMDAC 410
R A+ SVGADGS+R+FDLR LEHSTI+YEDPQ PLLRLAWN+ D NY+AT D+
Sbjct: 322 RGSAQIFASVGADGSLRLFDLRRLEHSTIMYEDPQRQPLLRLAWNRNDHNYIATFGQDSK 381
Query: 411 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHS 509
EV+ILD+R+PCTPVARL NH A +NG++WAPHS
Sbjct: 382 EVLILDLRLPCTPVARLRNHEATINGLSWAPHS 414
Score = 117 bits (282), Expect = 7e-27
Identities = 54/85 (63%), Positives = 66/85 (77%), Gaps = 3/85 (3%)
Frame = +1
Query: 10 NNNKNSDFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWGLETGQVLGRVN---EVSGHVKT 180
N N+ +++CAPLTSFDWNE+D NLIGTSSIDTTCT+W LETGQ +G + G V+T
Sbjct: 247 NTNRTAEYCAPLTSFDWNELDMNLIGTSSIDTTCTVWQLETGQAIGTTRPTAAIDGTVRT 306
Query: 181 QLIAHDKEVYDIAFSRAGGGRDMFA 255
QLIAHDKEV+DI+FSR G +FA
Sbjct: 307 QLIAHDKEVFDISFSR--GSAQIFA 329
Score = 87.8 bits (208), Expect = 6e-18
Identities = 36/53 (67%), Positives = 44/53 (83%)
Frame = +2
Query: 515 HICTAGDDHQALIWDIQQMPRAIEDPILAYTAAEGEVNQIQWGATQPDWIAIC 673
HICTAGDD+QALIWD+ +MP+ I DPILAY A+ EVNQI W ++ PDWI+IC
Sbjct: 417 HICTAGDDYQALIWDVHEMPKPINDPILAY-RAQAEVNQIHWSSSFPDWISIC 468
>Z79756-5|CAB02115.1| 388|Caenorhabditis elegans Hypothetical
protein F53C11.8 protein.
Length = 388
Score = 124 bits (298), Expect = 8e-29
Identities = 55/91 (60%), Positives = 67/91 (73%)
Frame = +3
Query: 237 GARYVRSVGADGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLATIAMDACEV 416
G + +VGADGS RMFDLRHL HSTI+YEDP L RL+WNKQ+P ++A A ++ EV
Sbjct: 234 GRDHFATVGADGSARMFDLRHLNHSTIVYEDPNKEKLQRLSWNKQEPYFMALFAENSQEV 293
Query: 417 IILDVRVPCTPVARLNNHRACVNGIAWAPHS 509
ILD+R+PC + RL NH VNGIAWAPHS
Sbjct: 294 QILDIRMPCNILCRLRNHTGPVNGIAWAPHS 324
Score = 99.5 bits (237), Expect = 2e-21
Identities = 45/82 (54%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Frame = +1
Query: 13 NNKNSDFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWGLETGQVLGRVNEVSGH-VKTQLI 189
NN NS + + LTSFDWNE++P IG SS+DTTCTI+ +E G +G+ + +KTQLI
Sbjct: 158 NNTNSQYGSALTSFDWNELEPRYIGVSSVDTTCTIYDVEVGCAIGQTKPTAPFTLKTQLI 217
Query: 190 AHDKEVYDIAFSRAGGGRDMFA 255
AHDK V+DI F++ GGRD FA
Sbjct: 218 AHDKPVHDIEFAKINGGRDHFA 239
Score = 94.7 bits (225), Expect = 6e-20
Identities = 39/56 (69%), Positives = 47/56 (83%)
Frame = +2
Query: 515 HICTAGDDHQALIWDIQQMPRAIEDPILAYTAAEGEVNQIQWGATQPDWIAICYNR 682
HICTAGDD QALIWD+QQ+PR ++DPILAY+A GEVNQI WG +WIAIC+N+
Sbjct: 327 HICTAGDDSQALIWDLQQVPRPVDDPILAYSAG-GEVNQIHWGPVHSNWIAICFNK 381
>Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical
protein T01G1.3 protein.
Length = 1083
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +1
Query: 43 LTSFDWNEVDPNLIGTSSIDTTCTIWGLETGQVLGRVNEVSG 168
+TS DWN+ D L+ +S D IW ET +VLG V + G
Sbjct: 259 ITSVDWNKADDRLVISSGCDGQVVIWNHETSEVLGGVGSLQG 300
>Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical
protein T01G1.3 protein.
Length = 1083
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +1
Query: 43 LTSFDWNEVDPNLIGTSSIDTTCTIWGLETGQVLGRVNEVSG 168
+TS DWN+ D L+ +S D IW ET +VLG V + G
Sbjct: 259 ITSVDWNKADDRLVISSGCDGQVVIWNHETSEVLGGVGSLQG 300
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 37.5 bits (83), Expect = 0.009
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 342 PLLRLAWNKQDPNYLATIA-MDACEVIILDVRVPCTPVARLNNHRACVNGIAW 497
PL R+AW P +LAT A ++ V + DVR P P + HR V W
Sbjct: 282 PLGRVAWRPDRPYHLATCASVNETSVHVWDVRRPYLPYVTYDEHRDSVTDACW 334
>Z49127-9|CAA88948.1| 340|Caenorhabditis elegans Hypothetical
protein F13D12.7 protein.
Length = 340
Score = 34.3 bits (75), Expect = 0.083
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 67 VDPNLIGTSSIDTTCTIWGLETGQVLGRVNEVSGHVKTQLIAHD 198
+D N I TSS D TC +W +ETGQ +G V + ++ D
Sbjct: 152 LDDNQIVTSSGDMTCALWDIETGQQCTAFTGHTGDVMSLSLSPD 195
>X17497-1|CAA35532.1| 340|Caenorhabditis elegans G-protein protein.
Length = 340
Score = 34.3 bits (75), Expect = 0.083
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 67 VDPNLIGTSSIDTTCTIWGLETGQVLGRVNEVSGHVKTQLIAHD 198
+D N I TSS D TC +W +ETGQ +G V + ++ D
Sbjct: 152 LDDNQIVTSSGDMTCALWDIETGQQCTAFTGHTGDVMSLSLSPD 195
>AF291846-1|AAK55963.1| 340|Caenorhabditis elegans heterotrimeric G
protein beta subunit1 protein.
Length = 340
Score = 34.3 bits (75), Expect = 0.083
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 67 VDPNLIGTSSIDTTCTIWGLETGQVLGRVNEVSGHVKTQLIAHD 198
+D N I TSS D TC +W +ETGQ +G V + ++ D
Sbjct: 152 LDDNQIVTSSGDMTCALWDIETGQQCTAFTGHTGDVMSLSLSPD 195
>Z71263-5|CAA95824.1| 356|Caenorhabditis elegans Hypothetical
protein F52A8.2 protein.
Length = 356
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 76 NLIGTSSIDTTCTIWGLETGQVLGRVNEVSGHV 174
NLI T S D+TC IW +E+GQ++ + +G V
Sbjct: 169 NLILTGSGDSTCAIWDVESGQLIQNFHGHTGDV 201
>AF291847-1|AAK55964.1| 356|Caenorhabditis elegans heterotrimeric G
protein beta subunit2 protein.
Length = 356
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 76 NLIGTSSIDTTCTIWGLETGQVLGRVNEVSGHV 174
NLI T S D+TC IW +E+GQ++ + +G V
Sbjct: 169 NLILTGSGDSTCAIWDVESGQLIQNFHGHTGDV 201
>Z31590-4|CAD27606.1| 495|Caenorhabditis elegans Hypothetical
protein R01H10.3d protein.
Length = 495
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +1
Query: 37 APLTSFDWNEVDPNLIGTSSIDTTCTIWGLETGQVLGRVNEVSGHVKTQLIAHDKEVYDI 216
AP W+ + N+I + S DTTC +W + + ++E + +L H K V I
Sbjct: 80 APCLEVAWSPFNDNVIASCSEDTTCKVWVIPDRGLNRNLSEPA----VELTGHQKRVNTI 135
Query: 217 AF 222
A+
Sbjct: 136 AW 137
>Z31590-3|CAD27605.1| 607|Caenorhabditis elegans Hypothetical
protein R01H10.3c protein.
Length = 607
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +1
Query: 37 APLTSFDWNEVDPNLIGTSSIDTTCTIWGLETGQVLGRVNEVSGHVKTQLIAHDKEVYDI 216
AP W+ + N+I + S DTTC +W + + ++E + +L H K V I
Sbjct: 80 APCLEVAWSPFNDNVIASCSEDTTCKVWVIPDRGLNRNLSEPA----VELTGHQKRVNTI 135
Query: 217 AF 222
A+
Sbjct: 136 AW 137
>Z31590-2|CAD27604.1| 538|Caenorhabditis elegans Hypothetical
protein R01H10.3b protein.
Length = 538
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +1
Query: 37 APLTSFDWNEVDPNLIGTSSIDTTCTIWGLETGQVLGRVNEVSGHVKTQLIAHDKEVYDI 216
AP W+ + N+I + S DTTC +W + + ++E + +L H K V I
Sbjct: 80 APCLEVAWSPFNDNVIASCSEDTTCKVWVIPDRGLNRNLSEPA----VELTGHQKRVNTI 135
Query: 217 AF 222
A+
Sbjct: 136 AW 137
>Z31590-1|CAA83461.1| 605|Caenorhabditis elegans Hypothetical
protein R01H10.3a protein.
Length = 605
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +1
Query: 37 APLTSFDWNEVDPNLIGTSSIDTTCTIWGLETGQVLGRVNEVSGHVKTQLIAHDKEVYDI 216
AP W+ + N+I + S DTTC +W + + ++E + +L H K V I
Sbjct: 80 APCLEVAWSPFNDNVIASCSEDTTCKVWVIPDRGLNRNLSEPA----VELTGHQKRVNTI 135
Query: 217 AF 222
A+
Sbjct: 136 AW 137
>AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical
protein C05D2.10b protein.
Length = 486
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 37 APLTSFDWNEVDPNLIGTSSIDTTCTIWGLETGQVLGRVNEVSGH 171
AP++ +W ++ T+S D T +W +E G+V VN +SGH
Sbjct: 281 APVSCCEWLAGGQQMV-TASWDRTANVWDVEKGEV---VNILSGH 321
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 76 NLIGTSSIDTTCTIWGLETGQVLGRVNEVSGHVKTQLIAHD 198
N+ ++S D T IW LE+G L +G V I+++
Sbjct: 153 NICASASADQTARIWSLESGACLATYTGHTGSVNCVAISNN 193
>AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical
protein C05D2.10a protein.
Length = 484
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 37 APLTSFDWNEVDPNLIGTSSIDTTCTIWGLETGQVLGRVNEVSGH 171
AP++ +W ++ T+S D T +W +E G+V VN +SGH
Sbjct: 279 APVSCCEWLAGGQQMV-TASWDRTANVWDVEKGEV---VNILSGH 319
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 76 NLIGTSSIDTTCTIWGLETGQVLGRVNEVSGHVKTQLIAHD 198
N+ ++S D T IW LE+G L +G V I+++
Sbjct: 151 NICASASADQTARIWSLESGACLATYTGHTGSVNCVAISNN 191
>AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical
protein Y54H5A.1 protein.
Length = 453
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = +3
Query: 255 SVGADGSVRMFDLRHLEHSTII--YEDPQHTPLLRLAWNKQDPNYLATIAMDACEVIILD 428
S ADGS++++D R + + + + ++WN+ + N + + D E+ I
Sbjct: 293 SCSADGSIKLWDTRSAPKDACVCTVQKAHESDVNVISWNRHE-NLIVSGGDDG-ELKIWS 350
Query: 429 VRVPC--TPVARLNNHRACVNGIAWAPHSLVT 518
++ PVA H + + + W PH T
Sbjct: 351 LKTIQFGQPVALFKYHNSPITSVDWHPHETTT 382
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 37 APLTSFDWNEVDPNLIGTSSIDTTCTIWGLET 132
+P+TS DW+ + S D TIW + T
Sbjct: 368 SPITSVDWHPHETTTFMASGEDDQTTIWDIAT 399
>Z82274-8|CAB05230.3| 467|Caenorhabditis elegans Hypothetical
protein JC8.2 protein.
Length = 467
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/60 (18%), Positives = 26/60 (43%)
Frame = +1
Query: 1 RHENNNKNSDFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWGLETGQVLGRVNEVSGHVKT 180
R + +N + S WN + +++ + D T +W L+ + + + G ++T
Sbjct: 235 RKKRDNSAQGHTDAVISLAWNRITTHVLASGGADKTVVLWDLDEAKPAQIIPDQGGEIQT 294
>Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 29.1 bits (62), Expect = 3.1
Identities = 27/98 (27%), Positives = 42/98 (42%)
Frame = +3
Query: 255 SVGADGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLATIAMDACEVIILDVR 434
SVG D + ++D+R I D + LA+N LAT + D V + D+R
Sbjct: 240 SVGDDKKLLIWDVRTSTPGHCI--DAHSAEVNCLAFNPYSEFILATGSADKT-VALWDLR 296
Query: 435 VPCTPVARLNNHRACVNGIAWAPHSLVTSAPPETTTRL 548
+ +HR + + W+PH+ A T RL
Sbjct: 297 NLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRL 334
>AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 29.1 bits (62), Expect = 3.1
Identities = 27/98 (27%), Positives = 42/98 (42%)
Frame = +3
Query: 255 SVGADGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLATIAMDACEVIILDVR 434
SVG D + ++D+R I D + LA+N LAT + D V + D+R
Sbjct: 240 SVGDDKKLLIWDVRTSTPGHCI--DAHSAEVNCLAFNPYSEFILATGSADKT-VALWDLR 296
Query: 435 VPCTPVARLNNHRACVNGIAWAPHSLVTSAPPETTTRL 548
+ +HR + + W+PH+ A T RL
Sbjct: 297 NLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRL 334
>AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic
multivulva protein LIN-53 p48 protein.
Length = 417
Score = 29.1 bits (62), Expect = 3.1
Identities = 27/98 (27%), Positives = 42/98 (42%)
Frame = +3
Query: 255 SVGADGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLATIAMDACEVIILDVR 434
SVG D + ++D+R I D + LA+N LAT + D V + D+R
Sbjct: 240 SVGDDKKLLIWDVRTSTPGHCI--DAHSAEVNCLAFNPYSEFILATGSADKT-VALWDLR 296
Query: 435 VPCTPVARLNNHRACVNGIAWAPHSLVTSAPPETTTRL 548
+ +HR + + W+PH+ A T RL
Sbjct: 297 NLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRL 334
>U29488-11|AAK93842.1| 753|Caenorhabditis elegans Hypothetical
protein C56C10.11 protein.
Length = 753
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +3
Query: 300 LEHSTIIYEDPQHTPLLRLAWNKQDPNYLATIAMDAC 410
L H T Y D L+RL W P+ LA AM+ C
Sbjct: 237 LTHGTQHYYDVIERQLVRLNWQALWPSRLAITAMENC 273
>Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical
protein F55B12.3b protein.
Length = 585
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 43 LTSFDWNEVDPNLIGTSSIDTTCTIWGLETGQVL 144
+TS W N++ TSS D T +W +E G ++
Sbjct: 504 ITSLQW--FGRNMVATSSDDGTVKLWDIERGALI 535
>Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical
protein F55B12.3a protein.
Length = 587
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 43 LTSFDWNEVDPNLIGTSSIDTTCTIWGLETGQVL 144
+TS W N++ TSS D T +W +E G ++
Sbjct: 506 ITSLQW--FGRNMVATSSDDGTVKLWDIERGALI 537
>Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical
protein ZC302.2a protein.
Length = 501
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 40 PLTSFDWNEVDPNLIGTSSIDTTCTIWGLETGQVL 144
P+TS +N D N + TSS D +W +G L
Sbjct: 341 PITSISYNH-DGNTMATSSYDGCIRVWDAASGSCL 374
>Z47358-8|CAA87433.1| 702|Caenorhabditis elegans Hypothetical
protein ZK1307.6 protein.
Length = 702
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 518 ICTAGDDHQALIWDIQQMPRAIEDPILAYTAAEGEVNQIQW 640
+ + G+D+Q L+W++++ +PI YT V + W
Sbjct: 537 LASGGNDNQLLVWNLRR-----NEPIQTYTQHNAAVKALAW 572
>U76402-1|AAB39734.1| 777|Caenorhabditis elegans degenerin protein.
Length = 777
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -1
Query: 337 CWGSS*MMVE-CSRCLRSNIRTDPSAPTERTYLAPRR-PY*TLCRTLPYH 194
C+ +S V+ CS C SN DP P +A P LC+++ +H
Sbjct: 292 CYPTSVWTVKKCSGCSISNTCPDPDGPNASKQIAKHNSPLPCLCQSISHH 341
>U40798-3|AAA81473.2| 777|Caenorhabditis elegans Uncoordinated
protein 8 protein.
Length = 777
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -1
Query: 337 CWGSS*MMVE-CSRCLRSNIRTDPSAPTERTYLAPRR-PY*TLCRTLPYH 194
C+ +S V+ CS C SN DP P +A P LC+++ +H
Sbjct: 292 CYPTSVWTVKKCSGCSISNTCPDPDGPNASKQIAKHNSPLPCLCQSISHH 341
>AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein.
Length = 587
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 43 LTSFDWNEVDPNLIGTSSIDTTCTIWGLETGQVL 144
+TS W N++ TSS D T +W +E G ++
Sbjct: 506 ITSLQW--FGRNMVATSSDDGTVKLWDIERGALI 537
>AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical
protein Y39H10A.6 protein.
Length = 684
Score = 27.9 bits (59), Expect = 7.2
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +1
Query: 58 WNEVDPNLIGTSSIDTTCTIWGLETGQ 138
WN DP ++ + D T +W L+ +
Sbjct: 573 WNPADPTMLVSCGADATIRVWSLDRSE 599
>Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical
protein CC4.3 protein.
Length = 510
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 70 DPNLIGTSSIDTTCTIWGLETGQVLGR 150
D ++ T SID +W +ETG L R
Sbjct: 275 DSEMLATGSIDGKIKVWKVETGDCLRR 301
>Z81486-5|CAB03987.1| 570|Caenorhabditis elegans Hypothetical
protein C53A5.6 protein.
Length = 570
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Frame = +3
Query: 303 EHSTIIYEDPQHTPLLRLAWNKQDPNYLATIAMDACEVIILDVRVP----CTPVARLNNH 470
EH I+++ Q + QDP +A A E +++ V P TPV R+ N
Sbjct: 261 EHDRIVFQTKQPVTKANFVFASQDPVLVADRKQSAREPLLIGVYDPKNRGWTPVGRMPNP 320
Query: 471 RA 476
++
Sbjct: 321 KS 322
>Z81109-17|CAB03241.2| 497|Caenorhabditis elegans Hypothetical
protein R10D12.10 protein.
Length = 497
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -1
Query: 211 RTLPYHERSTESSRAQTL-H*PCPRPVQSPSPR 116
RTLP ++ T++S ++ H P P++ PSP+
Sbjct: 443 RTLPPKQKHTKTSSTSSVSHQTPPSPIKKPSPK 475
>U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein 363,
isoform b protein.
Length = 2692
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -2
Query: 669 MAIQSGCVAPHWIWLTSPSAAV*ARIGSSMARGICCMSQI 550
+++ G H +WL SPS+ V ++ R + CMS +
Sbjct: 2463 LSVTQGEDLRHVLWLKSPSSEVWFDRRTNYTRSVACMSMV 2502
>U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein 363,
isoform a protein.
Length = 2695
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -2
Query: 669 MAIQSGCVAPHWIWLTSPSAAV*ARIGSSMARGICCMSQI 550
+++ G H +WL SPS+ V ++ R + CMS +
Sbjct: 2466 LSVTQGEDLRHVLWLKSPSSEVWFDRRTNYTRSVACMSMV 2505
>AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein.
Length = 510
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 70 DPNLIGTSSIDTTCTIWGLETGQVLGR 150
D ++ T SID +W +ETG L R
Sbjct: 275 DSEMLATGSIDGKIKVWKVETGDCLRR 301
>AC024753-2|AAF60457.2| 561|Caenorhabditis elegans Hypothetical
protein Y23H5B.5 protein.
Length = 561
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +2
Query: 491 RLGAAQSCH---ICTAGDDHQALIWDIQQMPRAIE 586
R GA S + + T G DH+ +WDI+ +++E
Sbjct: 181 RCGAVSSINDHIVLTGGYDHKVRLWDIRSKEKSLE 215
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,040,384
Number of Sequences: 27780
Number of extensions: 355927
Number of successful extensions: 1228
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1222
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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